From 88e56cb99243082ba609290c8eba61e08c02eb2c Mon Sep 17 00:00:00 2001
From: zsloan
Date: Thu, 24 Oct 2019 11:53:55 -0500
Subject: Changed logic for generating drop-downs such that it shows the
 correct Phenotypes name when there's no accession ID

---
 wqflask/base/data_set.py                           |  2 +-
 wqflask/wqflask/api/gen_menu.py                    | 10 ++++--
 .../new/javascript/dataset_menu_structure.json     | 36 ++++++++++++++++++++--
 3 files changed, 42 insertions(+), 6 deletions(-)

diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py
index 4df47083..16720656 100644
--- a/wqflask/base/data_set.py
+++ b/wqflask/base/data_set.py
@@ -346,7 +346,7 @@ class DatasetGroup(object):
 
     def get_samplelist(self):
         result = None
-        key = "samplelist:v2:" + self.name
+        key = "samplelist:v3:" + self.name
         if USE_REDIS:
             result = Redis.get(key)
 
diff --git a/wqflask/wqflask/api/gen_menu.py b/wqflask/wqflask/api/gen_menu.py
index 77ca6525..078e3782 100644
--- a/wqflask/wqflask/api/gen_menu.py
+++ b/wqflask/wqflask/api/gen_menu.py
@@ -201,9 +201,15 @@ def build_datasets(species, group, type_name):
                     dataset_text = str(result[2])
                 datasets.append([dataset_id, dataset_value, dataset_text])
         else:
+            result = g.db.execute("""SELECT PublishFreeze.Name, PublishFreeze.FullName
+                                      FROM PublishFreeze, InbredSet
+                                      WHERE InbredSet.Name = '{}' AND
+                                          PublishFreeze.InbredSetId = InbredSet.Id
+                                      ORDER BY PublishFreeze.CreateTime ASC""".format(group)).fetchone()
+
             dataset_id = "None"
-            dataset_value = "%sPublish" % group
-            dataset_text = "%s Phenotypes" % group
+            dataset_value = str(result[0])
+            dataset_text = str(result[1])
             datasets.append([dataset_id, dataset_value, dataset_text])
 
     elif type_name == "Genotypes":
diff --git a/wqflask/wqflask/static/new/javascript/dataset_menu_structure.json b/wqflask/wqflask/static/new/javascript/dataset_menu_structure.json
index 0fd9321c..f9bce083 100644
--- a/wqflask/wqflask/static/new/javascript/dataset_menu_structure.json
+++ b/wqflask/wqflask/static/new/javascript/dataset_menu_structure.json
@@ -1518,6 +1518,13 @@
       }, 
       "mouse": {
          "AIL": {
+            "Genotypes": [
+               [
+                  "None", 
+                  "AILGeno", 
+                  "AIL Genotypes"
+               ]
+            ], 
             "Hippocampus mRNA": [
                [
                   "874", 
@@ -1768,7 +1775,7 @@
                [
                   "None", 
                   "B6D2F2-PSUPublish", 
-                  "B6D2F2-PSU Phenotypes"
+                  "B6D2F2 PSU Phenotypes"
                ]
             ]
          }, 
@@ -3189,7 +3196,7 @@
                [
                   "None", 
                   "BXD300Publish", 
-                  "BXD300 Phenotypes"
+                  "BXD300 Published Phenotypes"
                ]
             ]
          }, 
@@ -3323,7 +3330,7 @@
                [
                   "None", 
                   "CIE-INIAPublish", 
-                  "CIE-INIA Phenotypes"
+                  "LCM Phenotypes"
                ]
             ]
          }, 
@@ -3552,6 +3559,15 @@
                ]
             ]
          }, 
+         "LGSM-AIG34_50-56-GBS": {
+            "Phenotypes": [
+               [
+                  "None", 
+                  "LGSM-AIG34_50-56-GBSPublish", 
+                  "LGSM AIG34/50-56 GBS Phenotypes"
+               ]
+            ]
+         }, 
          "LXS": {
             "Genotypes": [
                [
@@ -4217,6 +4233,10 @@
             "LXS", 
             "ILSXISS (LXS) RI Family (strain means)"
          ], 
+         [
+            "LGSM-AIG34_50-56-GBS", 
+            "LGSM AI G34/50-56 Lionikas (GBS)"
+         ], 
          [
             "MDP", 
             "Mouse Diversity Panel (strain means)"
@@ -5008,6 +5028,10 @@
                "Phenotypes", 
                "Phenotypes"
             ], 
+            [
+               "Genotypes", 
+               "Genotypes"
+            ], 
             [
                "Hippocampus mRNA", 
                "Hippocampus mRNA"
@@ -5541,6 +5565,12 @@
                "Striatum mRNA"
             ]
          ], 
+         "LGSM-AIG34_50-56-GBS": [
+            [
+               "Phenotypes", 
+               "Phenotypes"
+            ]
+         ], 
          "LXS": [
             [
                "Phenotypes", 
-- 
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