From 4dea9436f3678c9f5640001b0e5b66c582048498 Mon Sep 17 00:00:00 2001
From: BonfaceKilz
Date: Thu, 20 May 2021 23:23:50 +0300
Subject: templates: edit_trait: Update edit btn to point to editing endpoint

---
 wqflask/wqflask/templates/edit_trait.html | 171 +++++++++++++++++++++++-------
 1 file changed, 135 insertions(+), 36 deletions(-)

diff --git a/wqflask/wqflask/templates/edit_trait.html b/wqflask/wqflask/templates/edit_trait.html
index ae6bc0d5..e945e730 100644
--- a/wqflask/wqflask/templates/edit_trait.html
+++ b/wqflask/wqflask/templates/edit_trait.html
@@ -5,96 +5,195 @@
 Edit Trait for Published Database
 Submit Trait | Reset
 
+{% if publish_xref.comments %}
+<h2>Update History:</h2>
+
+{{ publish_xref.comments }}
+
+{% endif %}
+
 <form class="form-horizontal" method="post" action="/show_temp_trait">
     <h2 class="text-center">Trait Information:</h2>
     <div class="form-group">
-        <label for="pubmedId" class="col-sm-2 control-label">
-            Pubmed ID:
-        </label>
+        <label for="pubmedId" class="col-sm-2 control-label">Pubmed ID:</label>
         <!-- Do not enter PubMed_ID if this trait has not been Published.
              If the PubMed_ID you entered is alreday stored in our
              database, all the following fields except Post Publication
              Description will be ignored.  Do not enter any non-digit
              character in this field. -->
-        <div class="col-sm-10">
-            <textarea id="pubmedId" class="col-sm-10 form-control" rows="1"></textarea>
+        <div class="col-sm-8">
+            <textarea id="pubmedId" class="form-control" rows="1">
+{{ publish_xref.publication_id |default('', true) }}
+            </textarea>
         </div>
     </div>
     <div class="form-group">
         <label for="prePubDesc" class="col-sm-2 control-label">Pre Publication Description:</label>
-        <div class="col-sm-10">
-            <textarea id="prePubDesc" class="form-control" rows="5"></textarea>
+        <div class="col-sm-8">
+            <textarea id="prePubDesc" class="form-control" rows="4">
+{{ phenotype.pre_pub_description |default('', true) }}
+            </textarea>
         </div>
         <!-- If the PubMed ID is entered, the Post Publication Description
              will be shown to all users. If there is no PubMed ID, and the
              Pre Publication Description is entered, only you and
              authorized users can see the Post Publication Description -->
     </div>
+    <div class="form-group">
+        <label for="postPubDesc" class="col-sm-2 control-label">Post Publication Description:</label>
+        <div class="col-sm-8">
+            <textarea id="prePubDesc" class="form-control" rows="4">
+{{ phenotype.post_pub_description |default('', true) }}
+            </textarea>
+        </div>
+    </div>
+    <div class="form-group">
+        <label for="origDesc" class="col-sm-2 control-label">Original Description:</label>
+        <div class="col-sm-8">
+            <textarea id="origDesc" class="form-control" rows="4">
+{{ phenotype.original_description |default('', true) }}
+            </textarea>
+        </div>
+    </div>
+    <div class="form-group">
+        <label for="units" class="col-sm-2 control-label">Units:</label>
+        <div class="col-sm-8">
+            <textarea id="units" class="form-control" rows="1">
+{{ phenotype.units |default('', true) }}
+            </textarea>
+        </div>
+    </div>
+    <div class="form-group">
+        <label for="prePubAbbrev" class="col-sm-2 control-label">
+            Pre Publication Abbreviation:
+        </label>
+        <div class="col-sm-8">
+            <textarea id="prePubAbbrev" class="form-control" rows="1">
+{{ phenotype.pre_pub_abbreviation |default('', true) }}
+            </textarea>
+        </div>
+    </div>
+    <div class="form-group">
+        <label for="postPubAbbrev" class="col-sm-2 control-label">
+            Post Publication Abbreviation:
+        </label>
+        <div class="col-sm-8">
+            <textarea id="postPubAbbrev" class="form-control" rows="1">
+{{ phenotype.post_pub_abbreviation |default('', true) }}
+            </textarea>
+        </div>
+    </div>
+    <div class="form-group">
+        <label for="labcode" class="col-sm-2 control-label">
+            Lab Code:
+        </label>
+        <div class="col-sm-8">
+            <textarea id="labcode" class="form-control" rows="1">
+{{ phenotype.lab_code |default('', true) }}
+            </textarea>
+        </div>
+    </div>
+    <div class="form-group">
+        <label for="labcode" class="col-sm-2 control-label">
+            Submitter:
+        </label>
+        <div class="col-sm-8">
+            <textarea id="submitter" class="form-control" rows="1">
+{{ phenotype.submitter |default('', true) }}
+            </textarea>
+        </div>
+    </div>
     <div class="form-group">
         <label for="owner" class="col-sm-2 control-label">Owner:</label>
-        <div class="col-sm-10">
-            <textarea id="owner" class="form-control" rows="1"></textarea>
+        <div class="col-sm-8">
+            <textarea id="owner" class="form-control" rows="1">
+{{ phenotype.owner |default('', true) }}
+            </textarea>
         </div>
-        <!-- Please provide detailed owner contact information including
-             full name, title, institution, address, email etc -->
     </div>
     <div class="form-group">
-        <label for="authors" class="col-sm-2 control-label">*Authors:</label>
-        <div class="col-sm-10">
-            <textarea id="authors" class="form-control" rows="2"></textarea>
+        <label for="owner" class="col-sm-2 control-label">
+            Authorized Users:
+        </label>
+        <div class="col-sm-8">
+            <textarea id="owner" class="form-control" rows="1">
+{{ phenotype.authorized_users |default('', true) }}
+            </textarea>
         </div>
     </div>
     <div class="form-group">
-        <label for="title" class="col-sm-2 control-label">*Title:</label>
-        <div class="col-sm-10">
-            <textarea id="title" class="col-sm-10 form-control" rows="2"></textarea>
+        <label for="authors" class="col-sm-2 control-label">Authors:</label>
+        <div class="col-sm-8">
+            <textarea id="authors" class="form-control" rows="2">
+{{ publication.authors |default('', true) }}
+            </textarea>
+        </div>
+    </div>
+    <div class="form-group">
+        <label for="title" class="col-sm-2 control-label">Title:</label>
+        <div class="col-sm-8">
+            <textarea id="title" class="form-control" rows="2">
+{{ publication.title |default('', true) }}
+            </textarea>
         </div>
     </div>
     <div class="form-group">
         <label for="abstract" class="col-sm-2 control-label">Abstract:</label>
-        <div class="col-sm-10">
-            <textarea id="abstract" class="col-sm-10 form-control" rows="6"></textarea>
+        <div class="col-sm-8">
+            <textarea id="abstract" class="form-control" rows="6">
+{{ publication.abstract |default('', true) }}
+            </textarea>
         </div>
     </div>
     <div class="form-group">
         <label for="journal" class="col-sm-2 control-label">Journal:</label>
-        <div class="col-sm-10">
-            <textarea id="journal" class="col-sm-10 form-control" rows="1"></textarea>
+        <div class="col-sm-8">
+            <textarea id="journal" class="form-control" rows="1">
+{{ publication.journal |default('', true) }}
+            </textarea>
         </div>
     </div>
     <div class="form-group">
         <label for="pages" class="col-sm-2 control-label">Pages:</label>
-        <div class="col-sm-10">
-            <textarea id="pages" class="col-sm-10 form-control" rows="1"></textarea>
+        <div class="col-sm-8">
+            <textarea id="pages" class="form-control" rows="1">
+{{ publication.pages |default('', true) }}
+            </textarea>
         </div>
     </div>
     <div class="form-group">
         <label for="month" class="col-sm-2 control-label">Month:</label>
-        <div class="col-sm-10">
-            <textarea id="month" class="col-sm-10 form-control" rows="1"></textarea>
+        <div class="col-sm-8">
+            <textarea id="month" class="form-control" rows="1">
+{{ publication.month |default('', true) }}
+            </textarea>
         </div>
     </div>
     <div class="form-group">
-        <label for="year" class="col-sm-2 control-label">*Year:</label>
-        <div class="col-sm-10">
-            <textarea id="year" class="col-sm-10 form-control" rows="6"></textarea>
+        <label for="year" class="col-sm-2 control-label">Year:</label>
+        <div class="col-sm-8">
+            <textarea id="year" class="form-control" rows="1">
+{{ publication.year |default('', true) }}
+            </textarea>
         </div>
     </div>
     <div class="form-group">
-        <label for="units" class="col-sm-2 control-label">*Units:</label>
-        <div class="col-sm-10">
-            <textarea id="units" class="col-sm-10 form-control" rows="1"></textarea>
-        </div>
+        <label for="sequence" class="col-sm-2 control-label">Sequence:</label>
+        <div class="col-sm-8">
+            <textarea id="sequence" class="form-control" rows="6">
+{{ publish_xref.sequence |default('', true) }}
+            </textarea>
         </div>
-    <!-- 
-         <h2 class="text-center">Trait Data:</h2>
-         Strain Name | Trait Data | SE | N Per Strain -->
+    </div>
+    <div class="controls" style="display:block; margin-left: 40%; margin-right: 20%;">
+        <input type="submit" style="width: 125px; margin-right: 25px;" class="btn btn-primary form-control col-xs-2" value="Submit Change">
+        <input type="reset" style="width: 110px;" class="btn btn-primary form-control col-xs-2" value="Reset">
+    </div>
 </form>
 
 {%endblock%}
 
 {% block js %}
-<script src="/static/new/javascript/dataset_select_menu_edit_trait.js"></script>
 <script>
  gn_server_url = "{{ gn_server_url }}";
 </script>
-- 
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