From 4dafd017ec1fc0cd1e78487560ed15d705a44b98 Mon Sep 17 00:00:00 2001 From: zsloan Date: Mon, 23 Aug 2021 17:11:28 +0000 Subject: For some reason sample_data was being set twice, and the second time used a test function that does not exclude parents/f1s (causing the N to be wrong if parents/f1s exist) --- wqflask/wqflask/correlation/correlation_gn3_api.py | 2 -- 1 file changed, 2 deletions(-) diff --git a/wqflask/wqflask/correlation/correlation_gn3_api.py b/wqflask/wqflask/correlation/correlation_gn3_api.py index f7c06a46..a78cb0b9 100644 --- a/wqflask/wqflask/correlation/correlation_gn3_api.py +++ b/wqflask/wqflask/correlation/correlation_gn3_api.py @@ -150,8 +150,6 @@ def fetch_sample_data(start_vars, this_trait, this_dataset, target_dataset): sample_data = process_samples( start_vars, this_dataset.group.samplelist) - sample_data = test_process_data(this_trait, this_dataset, start_vars) - if target_dataset.type == "ProbeSet": target_dataset.get_probeset_data(list(sample_data.keys())) else: -- cgit v1.2.3