From 1e7644dd49d7a4af771a1dd00600ae595a9b8d27 Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Mon, 3 Jan 2022 11:40:33 +0300
Subject: Add more items to trait string

Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi
---
 wqflask/wqflask/partial_correlations_views.py                 | 4 +++-
 wqflask/wqflask/static/new/javascript/partial_correlations.js | 3 ++-
 wqflask/wqflask/templates/collections/view.html               | 2 +-
 wqflask/wqflask/templates/partial_correlations.html           | 8 ++++----
 4 files changed, 10 insertions(+), 7 deletions(-)

diff --git a/wqflask/wqflask/partial_correlations_views.py b/wqflask/wqflask/partial_correlations_views.py
index 82287312..f3ec0f78 100644
--- a/wqflask/wqflask/partial_correlations_views.py
+++ b/wqflask/wqflask/partial_correlations_views.py
@@ -9,7 +9,9 @@ from wqflask import app
 from utility.tools import GN_SERVER_URL
 
 def parse_trait(trait_str: str) -> Union[dict, None]:
-    keys = ("name", "dataset", "symbol", "description", "data_hmac")
+    keys = (
+        "name", "dataset", "symbol", "description", "location", "mean_expr",
+        "max_lrs", "data_hmac")
     parts = tuple(part.strip() for part in trait_str.split(":::"))
     if len(parts) == len(keys):
         return dict(zip(keys, parts))
diff --git a/wqflask/wqflask/static/new/javascript/partial_correlations.js b/wqflask/wqflask/static/new/javascript/partial_correlations.js
index a6a07558..dea4c675 100644
--- a/wqflask/wqflask/static/new/javascript/partial_correlations.js
+++ b/wqflask/wqflask/static/new/javascript/partial_correlations.js
@@ -18,7 +18,8 @@ function key_value(keys, values) {
 
 function trait(trait_str) {
     return key_value(
-	["name", "dataset", "symbol", "description", "data_hmac"],
+	["name", "dataset", "symbol", "description", "location", "mean_expr",
+	 "max_lrs", "data_hmac"],
 	trait_str.split(":::"));
 }
 
diff --git a/wqflask/wqflask/templates/collections/view.html b/wqflask/wqflask/templates/collections/view.html
index f4270b67..432393a7 100644
--- a/wqflask/wqflask/templates/collections/view.html
+++ b/wqflask/wqflask/templates/collections/view.html
@@ -42,7 +42,7 @@
 		 value="{{uc.uc_id}}" />
 	  <input type="hidden"
 		 name="traits_list"
-		 value="{% for this_trait in trait_obs %}{{ this_trait.name }}:::{{ this_trait.dataset.name }}:::{{this_trait.symbol}}:::{{this_trait.description_display}}:::{{data_hmac('{}:{}'.format(this_trait.name, this_trait.dataset.name))}}|||{% endfor %}" />
+		 value="{% for this_trait in trait_obs %}{{ this_trait.name }}:::{{ this_trait.dataset.name }}:::{{this_trait.symbol}}:::{{this_trait.description_display}}:::{{this_trait.location_repr}}:::{{this_trait.mean}}:::{{this_trait['LRS_location_repr']}}:::{{data_hmac('{}:{}'.format(this_trait.name, this_trait.dataset.name))}}|||{% endfor %}" />
 	  <button id="run-partial-correlations"
 		  class="btn btn-primary"
 		  title="Run partial correlations"
diff --git a/wqflask/wqflask/templates/partial_correlations.html b/wqflask/wqflask/templates/partial_correlations.html
index c565d4bf..54468155 100644
--- a/wqflask/wqflask/templates/partial_correlations.html
+++ b/wqflask/wqflask/templates/partial_correlations.html
@@ -142,12 +142,12 @@
     <input type="hidden" name="step" id="step-indicator" value="{{step}}" />
     <input type="hidden"
 	   name="traits_list"
-	   value="{% for trait in traits_list %}{{trait['name']}}:::{{trait['dataset']}}:::{{trait['symbol']}}:::{{trait['description']}}:::{{trait['data_hmac']}}|||{% endfor %}">
+	   value="{% for trait in traits_list %}{{trait['name']}}:::{{trait['dataset']}}:::{{trait['symbol']}}:::{{trait['description']}}:::{{trait['location']}}:::{{trait['mean_expr']}}:::{{trait['max_lrs']}}:::{{trait['data_hmac']}}|||{% endfor %}">
 
     {%if primary_trait:%}
     <input type="hidden"
 	   name="primary_trait"
-	   value="{{primary_trait['name']}}:::{{primary_trait['dataset']}}:::{{primary_trait['symbol']}}:::{{primary_trait['description']}}:::{{primary_trait['data_hmac']}}"
+	   value="{{primary_trait['name']}}:::{{primary_trait['dataset']}}:::{{primary_trait['symbol']}}:::{{primary_trait['description']}}:::{{primary_trait['location']}}:::{{primary_trait['mean_expr']}}:::{{primary_trait['max_lrs']}}:::{{primary_trait['data_hmac']}}"
 	   id="trait_{{primary_trait['data_hmac']}}" />
 
     <div class="panel panel-info">
@@ -162,7 +162,7 @@
     {%if target_traits:%}
     <input type="hidden"
 	   name="target_traits"
-	   value="{%for trait in target_traits:%}{{trait['name']}}:::{{trait['dataset']}}:::{{trait['symbol']}}:::{{trait['description']}}:::{{trait['data_hmac']}},{%endfor%}" />
+	   value="{%for trait in target_traits:%}{{trait['name']}}:::{{trait['dataset']}}:::{{trait['symbol']}}:::{{trait['description']}}:::{{trait['location']}}:::{{trait['mean_expr']}}:::{{trait['max_lrs']}}:::{{trait['data_hmac']}}|||{%endfor%}" />
     <div class="panel panel-info">
       <div class="panel-heading">Target Traits (Y)</div>
       <div class="panel-body">
@@ -180,7 +180,7 @@
     {%if control_traits:%}
     <input type="hidden"
 	   name="control_traits"
-	   value="{%for trait in control_traits:%}{{trait['name']}}:::{{trait['dataset']}}:::{{trait['symbol']}}:::{{trait['description']}}:::{{trait['data_hmac']}}|||{%endfor%}" />
+	   value="{%for trait in control_traits:%}{{trait['name']}}:::{{trait['dataset']}}:::{{trait['symbol']}}:::{{trait['description']}}:::{{trait['location']}}:::{{trait['mean_expr']}}:::{{trait['max_lrs']}}:::{{trait['data_hmac']}}|||{%endfor%}" />
     <div class="panel panel-info">
       <div class="panel-heading">Control Traits (Z)</div>
       <div class="panel-body">
-- 
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