From 08054314542485da15fc2d2c1903d844348a4fe3 Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Fri, 13 Mar 2015 11:50:43 +0300 Subject: runlmm.py: remove extraneous conversion --- wqflask/wqflask/my_pylmm/pyLMM/runlmm.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py index 16e88419..69a80411 100644 --- a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py +++ b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py @@ -98,7 +98,7 @@ if cmd == 'redis': gnt = np.array(gn).T Y,G = removeMissingPhenotypes(y,gnt,options.verbose) print "G",G.shape,G - ps, ts = gn2_load_redis('testrun','other',np.array(k),Y,G,options.testing) + ps, ts = gn2_load_redis('testrun','other',k,Y,G,options.testing) print np.array(ps) print round(ps[0],4) assert(options.testing and round(ps[0],4)==0.7262) -- cgit v1.2.3