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Author
2013-01-12
Commented out a couple things in requirements.txt to get pip
Zachary Sloan
2013-01-11
Commented out import of rpy2 in correlationFunction.py due to
Zachary Sloan
2013-01-11
Upgraded packages requirements.txt but haven't tested
Zachary Sloan
2013-01-11
Overwrote requirements.txt
Zachary Sloan
2013-01-11
Trimmed a bunch of code off of marker_regression.py
Zachary Sloan
2013-01-10
Checking in before we try to write our own code for the manhattan
Zachary Sloan
2013-01-10
Checking in before trying to put manhattan plot sections closer together
Zachary Sloan
2013-01-10
Normalized the y axis for each manhattan plot section
Zachary Sloan
2013-01-10
The plots now correctly appear above/below each other.
Zachary Sloan
2013-01-10
Edited marker_regression.coffee to make every sub-manhattan plot
Zachary Sloan
2013-01-10
Made Chromosome class in marker_regression.coffee; current
Zachary Sloan
2013-01-10
Made x-axis values into ints; committing before trying to add multiple graphs
Zachary Sloan
2013-01-10
Worked with the manhattan plot coffeescript to set x-axis and change
Zachary Sloan
2013-01-09
Manhattan plot results are appearing correctly for chromosome 1
Zachary Sloan
2013-01-09
The histogram coffeescript is now in its own class and the graph
Zachary Sloan
2013-01-09
Checking in before putting the histogram coffeescript into its own
Zachary Sloan
2013-01-09
More or less finished the permutation histogram
Zachary Sloan
2013-01-09
Got the permutation plot working as a line plot; still need to make
Zachary Sloan
2013-01-09
jqplot added
Zachary Sloan
2013-01-09
Got the marker regression page to display again
Zachary Sloan
2013-01-08
js_data is being printed out (seemingly) correctly now for the
Zachary Sloan
2013-01-08
Created IndChromosome class in species.py and wrote functions for
Zachary Sloan
2013-01-08
Deleted some unnecessary code in marker_regression.py and fixed some bugs
Zachary Sloan
2013-01-04
Continued rewriting marker_regression.py code
Zachary Sloan
2013-01-04
Correct results are being returned from reaper for the marker regression page
Zachary Sloan
2013-01-03
Began working on marker_regression.py and created Chromosomes class
Zachary Sloan
2013-01-03
marker_regression page is up again
Zachary Sloan
2013-01-03
Created template for marek regression page and made the compute button direct
Zachary Sloan
2012-12-20
Changed layout of marker regression options
Zachary Sloan
2012-12-20
The control locus field in the interval mapping settings is now disabled if
Zachary Sloan
2012-12-20
Made composite mapping options show/hide for the interval mapping section
Zachary Sloan
2012-12-20
More changes to the layout of interval mapping options
Zachary Sloan
2012-12-20
Continued to customize the interval mapping menu
Zachary Sloan
2012-12-20
Improved appearance/layout of the interval mapping tab using bootstrap
Zachary Sloan
2012-12-20
Form data passed via POST for marker regression
Zachary Sloan
2012-12-18
Changed html for the marker regression tab
Zachary Sloan
2012-12-18
Created new file species.py and species class object TheSpecies
Zachary Sloan
2012-12-07
Got links working for statistics table labels
Zachary Sloan
2012-12-07
Got basic statistics in show_trait to display the correct number
Zachary Sloan
2012-12-07
Got show_trait page to appear again for phenotype traits
Zachary Sloan
2012-12-06
All 10 stats working
Zachary Sloan
2012-12-06
Continued work on basic statistics table in show_trait
Zachary Sloan
2012-12-06
Added minimum/maximum to basic statistics table
Zachary Sloan
2012-12-06
Got show_trait running again for MrnaAssay traits
Zachary Sloan
2012-12-06
Made many small changes to show_trait/data_set/search_results/trait to
Zachary Sloan
2012-12-05
Renamed webqtlTrait.py to trait.py
Zachary Sloan
2012-12-05
Continued to make changes related to getting rid of cursor/db_conn
Zachary Sloan
2012-12-04
Changed parser to allow quotes (i.e. name="rw williams")
Zachary Sloan
2012-12-04
Began changing references to cursor/db_conn to use sqlalchemy
Zachary Sloan
2012-11-30
Added example of escaping strings now that trasitioning to simple SQLAlchemy
Zachary Sloan
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