| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2022-07-25 | Remove Comparison Bar Chart button | zsloan | |
| 2022-07-25 | Change Interval Analyst genome browser link to use mm10 instead of mm9 | zsloan | |
| 2022-07-25 | Return config in app.config or None | Frederick Muriuki Muriithi | |
| Update the code to return the setting already set up in the app.config dictionary if it exists or None if it does not exist. | |||
| 2022-07-20 | Add marker hmac to mapping result markers so it can be directly passed to ↵ | zsloan | |
| the table | |||
| 2022-07-20 | Add drawCallback for highlighting selected rows to default tableSettings | zsloan | |
| 2022-07-20 | Change mapping results table (minus Interval Analyst) to use new ↵ | zsloan | |
| create_datatable.js code and load table from JSON row data | |||
| 2022-07-19 | Change search_result_page.html to generate its table with create_datatable.js | zsloan | |
| 2022-07-19 | Fix issue where customSettings weren't being passed when manually adjusting ↵ | zsloan | |
| column widths | |||
| 2022-07-19 | Added createdRow callback function to custom table settings for View | zsloan | |
| Collection page Also set a default table width of 2000px | |||
| 2022-07-19 | Change JS variables to camelCase and assign ID to table container div | zsloan | |
| 2022-07-14 | Remove column toggle JS from show_trait.html since it's in ↵ | zsloan | |
| initialize_show_trait_tables.js | |||
| 2022-07-14 | Call DataTable() on the table id instead of referring to the_table; not | zsloan | |
| sure why this is necessary, but the search doesn't work otherwise | |||
| 2022-07-12 | Include genotypes for F1s/reference/non-reference strains when fetching | zsloan | |
| sample data for genotype traits | |||
| 2022-07-11 | Increase min-width for div containing tool buttons on search page | zsloan | |
| 2022-07-08 | Add python for exporting case attributes | zsloan | |
| 2022-07-08 | Add JS for exporting case attributes (sample metadata) | zsloan | |
| 2022-07-04 | wqflask: Remove DebugToolbarExtension | BonfaceKilz | |
| This functionality, at least how we use it, is already provided natively in python's pdb. Should someone need this, they can add it manually. * wqflask/runserver.py (app_config): Remove "flask_debugtoolbar" import and instantiation. * wqflask/utility/startup_config.py (app_config): Ditto. | |||
| 2022-07-04 | wqflask: use the raw user string if value is non-existent in redis | BonfaceKilz | |
| * wqflask/wqflask/metadata_edits.py (_get_diffs): If a user---whose value is extracted from Redis and encoded in the file name---doesn't exist in Redis, use the raw string extracted from the file. | |||
| 2022-07-04 | wqflask: Use a map over a tuple when fetching case-attributes | BonfaceKilz | |
| * wqflask/wqflask/metadata_edits.py (update_phenotype): Replace old "get_case_attributes" function call which returned a dict with the new updated version that returns a tuple. | |||
| 2022-06-23 | Fix manual column width change feature to work in create_datatable.js | zsloan | |
| 2022-06-23 | Add columnDefs as parameter for setUserColumnDefWidths | zsloan | |
| Now that the function is in a separate JS file it needs the parameter to be directly provided | |||
| 2022-06-23 | Fix JS/CSS imports and include scroller setting in custom table settings | zsloan | |
| 2022-06-23 | Change some variables in search_result_page.html to camelCase | zsloan | |
| 2022-06-23 | Remove HTML table from collections/view.html and replace with list of | zsloan | |
| column definitions passed to create_datatable.js | |||
| 2022-06-23 | Change tableSettings in loadDataTable parameters to customSettings | zsloan | |
| 2022-06-23 | Change jsonable in GeneralTrait so that it passes all necessary table | zsloan | |
| information | |||
| 2022-06-23 | Convert trait.view to string for conversion to JSON | zsloan | |
| It's originally a boolean, which causes an error when passed to the JS code as JSON | |||
| 2022-06-23 | Change create_datatable.js from CRLF to LF + fix a couple syntax bugs | zsloan | |
| 2022-06-23 | Pass table data to collections/view template and create_table.js | zsloan | |
| 2022-06-21 | wqflask: views: Delete noisy logging and dead code | BonfaceKilz | |
| - Remove commented out code-blocks - Remove calls with this pattern: logger.info("Sending ...") logger.info(request.url) Should you want to inspect the local context of an environment when troubleshooting, set a breakpoint() and inspect the environment. To view everything in the local context, use "pp locals()"; and to view everything in the global context, use "pp globals()". | |||
| 2022-06-20 | Simplify partial correlation method choices | Frederick Muriuki Muriithi | |
| - Have only `Pearson's r` and `Spearman's rho` as the available choices for the partial correlations. | |||
| 2022-06-16 | Change table_functions.js variables to camelCase | zsloan | |
| 2022-06-16 | Replace DataTables code in collection view page with call to new create_table.js | zsloan | |
| 2022-06-16 | Initial commit for create_datatable.js | zsloan | |
| This file will contain the generic function for initializing datatables, that will take the table ID, table data, column definitions, and custom settings as input (custom settings being additional DataTables settings or settings differing from the defaults) | |||
| 2022-06-16 | Include json version of collection trait list, so it can be passed directly ↵ | zsloan | |
| to DataTables | |||
| 2022-06-15 | templates: base: Update GN2 footer | BonfaceKilz | |
| * wqflask/wqflask/templates/base: Remove links to non-functioning mailing list. Remove link to "#genenetwork" channel that isn't currently owned/moderated. Co-authored-by: Ethan Willis <elwillis1@gmail.com> | |||
| 2022-06-13 | Check chromosome for 'Un' in search results and print N/A in such cases | zsloan | |
| 2022-06-13 | Check for chromosome of 'Un' and print location as 'Not available' in such cases | zsloan | |
| 2022-06-13 | Increase width threshold for using scroller, to prevent issue with blue ↵ | zsloan | |
| lines at bottom of table | |||
| 2022-06-13 | Limit search result descriptions to 500 characters | zsloan | |
| 2022-06-13 | Add |safe to ensure HTML entites are correctly escaped for trait descriptions | zsloan | |
| 2022-06-10 | Skip failing integration test | BonfaceKilz | |
| ATM, it's hard to by-pass the authentication decorators, and as such, skip this test for. This may be deleted later. | |||
| 2022-06-10 | Reverse polarity for gemma additive effects in tests | BonfaceKilz | |
| Fixes broken test. See: #89a7868. | |||
| 2022-06-07 | Define gn_server_url before running the drop-down menu JS code | zsloan | |
| 2022-06-07 | Make indentation and spacing more consistent for | zsloan | |
| dataset_select_menu_orig.js | |||
| 2022-06-07 | Fix issue that caused Submit Trait page drop-down menus to not work | zsloan | |
| Also removes a bunch of unnecessary console logging | |||
| 2022-06-01 | Fix the way R/qtl is called in the GN2 REST API | zsloan | |
| 2022-06-01 | Remove IDs called 'submit' to prevent forms from breaking | zsloan | |
| Apparently if a button has an ID called 'submit', trying to submit a form via JS won't work | |||
| 2022-05-31 | Check if entered pubmed_id is already associated with a publication, and | zsloan | |
| set PublishXRef.PublicationId equal to that Id if it exists | |||
| 2022-05-31 | Reverse polarity for gemma additive effects | zsloan | |
| This is basically just a quick pseudo-fix to at least get the polarity right | |||
 |
index : genenetwork2 | |
| GeneNetwork (2nd generation) |
| aboutsummaryrefslogtreecommitdiff |