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AgeCommit message (Expand)Author
2019-03-01Added more information to the top-right corner of the mapping resultszsloan
2019-02-27Added loading page for correlationzsloan
2019-02-22Fixed some appearance issues with several tableszsloan
2019-02-18Updated installation instructions and SERVER_PORT for single flask serverPjotr Prins
2019-02-15Fixed error caused by change to N values in database (now takes strings inste...zsloan
2019-02-14Fixed minor bug with updating stats figures when sample values changedzsloan
2019-02-14Changed trait page tables to load JSONzsloan
2019-02-13Removed pylmm references and related functionsPjotr Prins
2019-02-13Remove all coffee filesPjotr Prins
2019-02-12Added GeneWeaver linkoutzsloan
2019-02-05Removed redundant header text from search page to save vertical spacezsloan
2019-02-05Fixed issue with getting marker info that affected heatmap and possibly other...zsloan
2019-02-04Changed the way the table is drawn for the search pages so that it can show w...zsloan
2019-01-22Fixed issue where Haplotype Analyst in mapping results would always show resu...zsloan
2019-01-17Redid gene global search to take JSON data input instead of converting an HTM...zsloan
2019-01-16Pushing SNP browser updateszsloan
2019-01-11Got InDel working for Variant Browserzsloan
2018-12-21Fixed collections so they can be very large (1000+ traits)zsloan
2018-12-05Fixed Verify linkzsloan
2018-12-05Fixed issue where SNP track for mapping did not appear correctlyzsloan
2018-11-20Added option to select chromosome from trait page when mappingzsloan
2018-11-13Changed trait sample table appearance to be more compactzsloan
2018-11-12Added change to remove qtlreaper use from correlation and prevent the inconsi...zsloan
2018-11-05Fixed quantile normalization issuezsloan
2018-11-04Fixed one more thingzsloan
2018-11-04Quick fix to issue where GEMMA wouldn't be run simultaneously on traits from ...zsloan
2018-11-02Minor fix since sometimes number of samples with values wasn't counted correctlyzsloan
2018-11-02Committing some changes that get non-LOCO GEMMA mapping working without using...zsloan
2018-11-01Updated the way snpbrowser initializes parameters, in preparation for drawing...zsloan
2018-10-24- SNP Browser is mostly complete; just need to test more and add SNP density ...zsloan
2018-10-12Fixed issue that caused error when mapping single-chromosome, since a second ...zsloan
2018-10-11- Added fix for GEMMA LOCOzsloan
2018-10-01Missed something when previously resolving the merge conflictzsloan
2018-10-01Resolved conflictzsloan
2018-10-01- Can now remove cofactors from correlation scatterplot and select them by ju...zsloan
2018-09-15Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testingPjotr Prins
2018-09-15Run gemma without debug and checks in productionPjotr Prins
2018-08-15The issue with adding anonymous collections should be fixed nowzsloan
2018-08-14Fixed minor issue in user_manager.pyzsloan
2018-08-14Added cofactors to correlation scatterplot and changed it to use Plotlyzsloan
2018-07-06Added square root transform optionszsloan
2018-07-02Added option to transform/normalize trait sample values (log2 and qnorm) on t...zsloan
2018-06-08Added option to add traits to existing collection, which I had forgotten prev...zsloan
2018-06-08User collections (now stored in ElasticSearch) are reimplemented now and shou...zsloan
2018-05-25Fixed issue causing anonymous collections to not work on my branch and stagin...zsloan
2018-05-17Added script to quantile normalize a data set and enter its normalized sample...zsloan
2018-05-01Merge /home/lei/gene into testingzsloan
2018-05-01Removed all code related to using GEMMA with PLINK input fileszsloan
2018-04-27Added marker filtering for data set groups with larger genotype fileszsloan
2018-04-23Changed GEMMA mapping to use -lmm 2 (Likelihood ratio test) as a parameter in...zsloan
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