genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Expand)	Author
2016-04-20	Introducing TEMPDIR	pjotrp
2016-04-20	[PATCH 024/100] Sanitizing file handling	Pjotr Prins
2016-04-20	[PATCH 023/100] WIP fixing all paths	Pjotr Prins
2016-04-20	Remover dependency to logger_tree (may reintroduce later)	pjotrp
2016-04-20	[PATCH 018/100] Find external tools: refactored code to work with GNU Guix	Pjotr Prins
2016-04-20	Removed import htmlgen as is not used (apparently)	pjotrp
2016-04-19	Merge branch 'master' of github.com:genenetwork/genenetwork2 into development	zsloan
2016-04-18	Additive effect lines are now separated by chromosome (like the qtl line in t...	zsloan
2016-04-14	Fixed issue where qtl lines in interval mapping wouldn't connect between chro...	zsloan
2016-04-13	Moved the code getting the description/location because it was throwing an er...	zsloan
2016-04-13	Global search should be able to return description and location columns now	zsloan
2016-04-13	All the datatables stuff should be passable by AJAX now, just need to figure ...	zsloan
2016-04-12	Fixed order of columns in AJAX-loading global search and added trait link	zsloan
2016-04-11	Changing global gene search to use gsearch_gene.html instead of gsearch_gene_...	zsloan
2016-04-11	Figured out how to load results into dataTable using AJAX, but still need to ...	zsloan
2016-04-11	Changed the way trait data is retrieved for the global search page (it now ge...	zsloan
2016-04-07	Added option to change the maximum y-axis value for GN1 mapping figure	zsloan
2016-04-07	Permutation figure and x-axis label should change to correctly reflect the ma...	zsloan
2016-04-07	SNP Track option should now work for GN1 mapping figure	zsloan
2016-04-06	The option to switch between LRS and LOD for the GN1 mapping figure should no...	zsloan
2016-04-06	Setting lodm to always be 1.0 fixes the issue where it would incorrectly disp...	zsloan
2016-04-06	Permutations (suggestive/significant lines, legend, and histogram) should now...	zsloan
2016-04-05	Bootstrap test should now work correctly for qtl reaper mapping method on ful...	zsloan
2016-04-05	Fixed issue where haplotype analyst option would appear when using genetic(ce...	zsloan
2016-03-30	Disabled Haplotype Analyst option if mapping scale is centimorgan/genetic	zsloan
2016-03-30	GN1 mapping now when mapping scale is centimorgan (for R/qtl)	zsloan
2016-03-29	Additive effect option now works for GN1 mapping figure	zsloan
2016-03-29	Forgot to add GeneralObject file needed for haplotype analyst in last commit	zsloan
2016-03-29	Haplotype Analyst now works for GN1 mapping figure	zsloan
2016-03-28	Legend option now works for GN1 mapping figure	zsloan
2016-03-28	Trait sample data table width now dynamically changes with number of attribut...	zsloan
2016-03-24	Graph width can now be set in Mapping Results	zsloan
2016-03-24	Add the Gene Track option to display the Gene Band for single chromosome view	zsloan
2016-03-24	Mapping results table is now limited to the top 200 markers; previously the p...	zsloan
2016-03-23	You can now select chromosome and an Mb range from the top menu and remap	zsloan
2016-03-23	Fixed GN1 mapping plots so that Y axis and the Y coordinates of manhattan plo...	zsloan
2016-03-21	Manhattan plot option now works for GN1 map, and GEMMA is set to display as m...	zsloan
2016-03-21	Changed code parsing marker csv file to increase GEMMA speed	zsloan
2016-03-18	Forgot to not retrieve sample data for the phenotype global search with the l...	zsloan
2016-03-18	Replaced header with other information in qtl map	zsloan
2016-03-15	Merge branch 'master' of github.com:genenetwork/genenetwork2 into development	zsloan
2016-03-15	Merge branch 'master' of https://github.com/genenetwork/genenetwork2	zsloan
2016-03-15	Fixed the mapping figure track that lets you zoom into a smaller range	zsloan
2016-03-14	Changed the way headers look across all pages	zsloan
2016-03-03	Fixed issue where correlation would do mapping if run after mapping	zsloan
2016-03-03	Merge branch 'master' of github.com:genenetwork/genenetwork2 into development	zsloan
2016-03-03	Fixed trait export to include SE values	zsloan
2016-03-03	Merge branch 'master' of https://github.com/genenetwork/genenetwork2	zsloan
2016-03-03	Update gsearch.py	Lei Yan
2016-03-02	Increased gsearch speed by removing unnecessary query for sample data	zsloan