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2021-11-23merge commit :added some logic that takes into account corr_sample_group ↵Alexander Kabui
when determining which samples to use when getting sample_data
2021-11-18refactor code for metadataAlexander Kabui
2021-11-18remove unused functions rename function namesAlexander Kabui
2021-11-18pep8 formatting;minor fixesAlexander Kabui
2021-11-17add generic functio for generating filenameAlexander Kabui
2021-11-17refactor sql query & date formattingAlexander Kabui
2021-11-17pep8 formatting;delete remove redis dependencyAlexander Kabui
2021-11-17isolate function to cache new traits metadataAlexander Kabui
2021-11-17isolate function to fetch the traits metadataAlexander Kabui
2021-11-17replace redis fetch for cached timestamp with a queryAlexander Kabui
2021-11-17isolate SQL_URI parse to a functionAlexander Kabui
2021-11-17use a dynamic value for the db_nameAlexander Kabui
2021-11-16use comprehension list;fix typoAlexander Kabui
2021-11-16pep8 formatting remove debug statementsAlexander Kabui
2021-11-16init disable fast compute:memory fork issuesAlexander Kabui
2021-11-16test generate new filesAlexander Kabui
2021-11-16refactor:fix on the query :modify cache pointAlexander Kabui
2021-11-15fetch only strains from the primary datasetsAlexander Kabui
2021-11-15test precomppute caching integrationAlexander Kabui
2021-11-15pep8 formatting & fix variable namesAlexander Kabui
2021-11-15refactor function to fetch datasets data for precomputesAlexander Kabui
2021-11-15fix for truncating filesAlexander Kabui
2021-11-11pep8 formatting + minor fixing for writing to filesAlexander Kabui
2021-11-11minor fix for updating dictAlexander Kabui
2021-11-11minor fix for generating file_nameAlexander Kabui
2021-11-11code to cache frequently run probeset correlationAlexander Kabui
2021-11-11fix issue with number for samplesAlexander Kabui
2021-11-11init test for precomputing sample correlationAlexander Kabui
2021-11-11add fast compute from gn3Alexander Kabui
2021-11-10add compute gifAlexander Kabui
2021-11-10rename:loading correlation results to computing correlationsAlexander Kabui
2021-11-08Fix runtime errorsBonfaceKilz
* wqflask/wqflask/__init__.py: when registering a URL, the url_prefix should begin with a trailing slash. * wqflask/wqflask/jupyter_notebooks.py: fix imports.
2021-11-08Hook up new UI page to the main menuFrederick Muriuki Muriithi
* Hook up the new Jupyter Notebooks UI to the main menu
2021-11-08Build UI for Jupyter Notebooks LauncherFrederick Muriuki Muriithi
* Build a HTML UI for the Jupyter Notebooks Launcher feature that fits in, aesthetically, with that of the whole GeneNetwork look and feel.
2021-11-05Add template for displaying changed dataBonfaceKilz
2021-11-04Removes unused importjgart
2021-11-04Use the correct dataset_id in sql queryBonfaceKilz
2021-11-04Remove variables that are only used onceBonfaceKilz
2021-11-04Delete obsolete template filesBonfaceKilz
2021-11-04Move "*/diffs/*" to metadata_edits moduleBonfaceKilz
2021-11-04Sort import according to pep-8 specBonfaceKilz
2021-11-04use gn3 importsBonfaceKilz
2021-11-04Remove "author" from file name when storing csvBonfaceKilz
2021-11-04Move authentication logic to gn3BonfaceKilz
2021-11-04metadata_edits.py: Embed resource-id in a given file-name csvBonfaceKilz
2021-11-04edit_phenotype.html: Update endpoint for downloading csvBonfaceKilz
2021-11-04Move "get_sample_data_as_csv" to metadata_edits.pyBonfaceKilz
2021-11-04Add "login_required" decorator to metadata edit endpointsBonfaceKilz
2021-11-04Delete "check_access_permissions"BonfaceKilz
This check happens before every single request! Remove this.
2021-11-04Delete noisy debuggingBonfaceKilz
Logging happens before every request, twice! Remove these.