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genenetwork2
acenteno
authentication_test
blatseq_fix
chores/code-refactoring
chores/lmdb-integration
chores/replace-cdns
chores/script-textfile-generator
correlations-return-fewer-results
debug-too-many-connections-error
decouple_tools_and_wqflask_app
development
epysode
feature/search-history
feature/textfile-generator
gn-master
guix-shell
hook-up-auth-to-traits-page
itp_covariate_testing
jupyter_notebooks_ui
lmdb-code/refactoring
master
notebooks_api
oauth2-migrate-user-details-and-data
partial-correlations
partial_corr_ui_rework
pcorrs_targets
penguin2
phewas
production
proxy-integration
refactor-configurations
refactor-data_set_py-20220920
revert-366-360_update_htmlgen
rework-genotype-linking
run-corrs-in-external-process
stable
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GeneNetwork (2nd generation)
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Author
2016-06-17
Removed trailing spaces in .py and .js files
Pjotr Prins
2016-06-16
Introduce behaviour parameters to facilitate development
Pjotr Prins
2016-05-17
Merge branch 'staging' of github.com:genenetwork/genenetwork2
zsloan
2016-05-10
Correlation successfully uses materialized views and parallel processing, but...
zsloan
2016-04-20
A few fixes to get the webserver running again
Pjotr Prins
2016-04-20
Parsing the names of the individuals, and coding H as -999
DannyArends
2016-04-20
Adding the geno file parser from Zach
DannyArends
2016-04-20
Show error when GENODIR is missing
Pjotr Prins
2016-04-20
external program should fail on return value not zero
pjotrp
2016-04-20
Minor fixes
pjotrp
2016-04-20
[PATCH 042/100] Sanitizing locations
Pjotr Prins
2016-04-20
[PATCH 041/100] Fixes for running tools
Pjotr Prins
2016-04-20
-a
Pjotr Prins
2016-04-20
[PATCH 037/100] WebQtlConfig: sanitizing naming and used vars
Pjotr Prins
2016-04-20
Settled on the _COMMAND syntax over _RUN
pjotrp
2016-04-20
[PATCH 033/100] Refactored file searching
Pjotr Prins
2016-04-20
Fine tuning file locating
pjotrp
2016-04-20
tools.py: add function locate_without_error
pjotrp
2016-04-20
[PATCH 027/100] Introduce tools.locate
Pjotr Prins
2016-04-20
[PATCH 026/100] Introducing cached values PYLMM_COMMAND,
Pjotr Prins
2016-04-20
Introducing TEMPDIR
pjotrp
2016-04-20
[PATCH 024/100] Sanitizing file handling
Pjotr Prins
2016-04-20
[PATCH 023/100] WIP fixing all paths
Pjotr Prins
2016-04-20
[PATCH 018/100] Find external tools: refactored code to work with GNU Guix
Pjotr Prins
2016-04-07
SNP Track option should now work for GN1 mapping figure
zsloan
2016-04-06
Permutations (suggestive/significant lines, legend, and histogram) should now...
zsloan
2015-11-09
Fixed issue that caused mapping to not work; for some reason the path to pylm...
zsloan
2015-07-09
Mapping methods now check for existing genotype files.
zsloan
2015-06-29
Merge pull request #72 from lomereiter/issue69
zsloan
2015-06-29
Merge pull request #77 from lomereiter/fix_sql
zsloan
2015-06-26
Fixed bug where mapping results sometimes wouldn't display. This would occur
zsloan
2015-06-18
removed unused function
Artem Tarasov
2015-06-18
add missing line to webqtlUtil
Artem Tarasov
2015-05-12
Add info to warning
pjotrp
2015-05-12
More elaborate handling of finding pylmm
Pjotr Prins
2015-05-12
Move path search into tools.py
pjotrp
2015-05-11
Moving pylmm out of the tree
pjotrp
2014-08-12
Fixed the scrollable data tables for the show trait page
Zachary Sloan
2014-07-18
Added outlier highlighting
Zachary Sloan
2014-05-05
Committing a bunch of changes related to integrating GEMMA and
Zachary Sloan
2014-02-27
Began working on a TraitCollection.py file that will contain both the
Zachary Sloan
2013-10-17
Sample objects are now passed to js_data for drawing the correlation
Lei Yan
2013-10-11
Merge /home/sam/gene
Lei Yan
2013-10-07
Worked on logins, session_ids, flash messages, etc.
Sam
2013-09-13
Merge https://github.com/zsloan/genenetwork
Lei Yan
2013-07-19
Finished integrating code that reads sample list from geno files
Zachary Sloan
2013-07-12
Rewrote code related to getting the tissue correlation column to display
Lei Yan
2013-06-20
Added file corr_result_helpers.py that includes the function that
Zachary Sloan
2013-06-19
Merge branch 'flask' of git://github.com/leiyan/GeneNetwork2-Python into flask
Zachary Sloan
2013-06-13
Fixed issue where too much memory was used as a result of creating a
Lei Yan
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