genenetwork2 - GeneNetwork (2nd generation)

Age	Commit message (Expand)	Author
2019-12-04	Added M to the possible non-number 'chromosome' names	zsloan
2019-12-04	Fixed error that sometimes occurs if there's no mean expression and changed i...	zsloan
2019-11-21	Use updated phenotype display IDs for all phenotypes with codes now, not just...	zsloan
2019-11-21	Added 3-letter codes to unpublished phenotype traits and fixed issue with ord...	zsloan
2019-11-14	Changed code to rebuild dataset list each time you view the trait page to avo...	zsloan
2019-11-05	Fixed issue with ordering items in correlation dataset select dropdown	zsloan
2019-10-24	Changed logic for generating drop-downs such that it shows the correct Phenot...	zsloan
2019-10-18	Added UniProt link and fixed issue that caused sample lists to not be formed ...	zsloan
2019-10-04	Fixed issue where there was an error if the REST API used for aliases was down	zsloan
2019-08-22	Changed header drop-down menu layout	zsloan
2019-08-01	Updated aliases to get all species aliases and remove duplicates	zsloan
2019-08-01	Added wikidata aliases	zsloan
2019-08-01	Made some more aesthetic changes to various pages and charts/figures	zsloan
2019-07-23	Added change to automatically update datasets list using rest api instead of ...	zsloan
2019-07-18	Made change that should fix encoding issue, fingers crossed	zsloan
2019-07-03	Fixed bug for creating one of the third party links on the trait page	zsloan
2019-06-24	Got non-LOCO GEMMA mapping working with gemma-wrapper (so caching should work...	zsloan
2019-06-18	Fixed issue with sorting involving 0's on trait page	zsloan
2019-06-05	Fixed issue that caused interval mapping to not work because the python imple...	zsloan
2019-06-04	Added GeneMANIA link	zsloan
2019-05-24	Replaced qtlreaper Dataset object with python object	zsloan
2019-05-14	Added all of the third party links from GN1	zsloan
2019-05-06	Removed some unused imports of htmlgen	zsloan
2019-03-18	- Added PCA traits to correlation matrix. You can't change their names yet or...	zsloan
2019-03-07	Changed the way covariates are displayed when selected for mapping	zsloan
2019-02-22	Fixed some appearance issues with several tables	zsloan
2019-02-15	Fixed error caused by change to N values in database (now takes strings inste...	zsloan
2019-02-13	Removed pylmm references and related functions	Pjotr Prins
2019-02-12	Added GeneWeaver linkout	zsloan
2019-02-05	Fixed issue with getting marker info that affected heatmap and possibly other...	zsloan
2019-01-11	Got InDel working for Variant Browser	zsloan
2018-12-21	Fixed collections so they can be very large (1000+ traits)	zsloan
2018-10-24	- SNP Browser is mostly complete; just need to test more and add SNP density ...	zsloan
2018-10-11	- Added fix for GEMMA LOCO	zsloan
2018-10-01	- Can now remove cofactors from correlation scatterplot and select them by ju...	zsloan
2018-08-14	Added cofactors to correlation scatterplot and changed it to use Plotly	zsloan
2018-05-17	Added script to quantile normalize a data set and enter its normalized sample...	zsloan
2018-04-19	Changed width of top bar and a couple other html objects to 100% instead of s...	zsloan
2018-04-16	Resolved conflicts after pulling changes	zsloan
2018-04-11	Added tissue correlation p value to correlation page results, since it was mi...	zsloan
2018-04-09	Removed svg.py, which I know isn't used, and webqtlFormData, which I'm pretty...	zsloan
2018-04-09	Removed unused code from webqtlFormData.py	zsloan
2018-04-09	Removed some unused code in webqtlConfig; some might need to be added back in...	zsloan
2018-04-06	Mapping figure output now gives more accurate information	zsloan
2018-03-22	Fix 'def' statement	Muriithi Frederick Muriuki
2018-02-10	Check for bimbam path and bail out if it is missing	Pjotr Prins
2017-12-20	Bring in some earlier work - mostly documentation and startup handling	Pjotr Prins
2017-11-06	Replaced Histogram and Bar Chart with Plotly version and added new Box Plot w...	zsloan
2017-08-29	Mostly changes related to getting gemma working with covariates and BIMBAM fi...	zsloan
2017-06-12	Fixed issue where 0.0 values would be converted into X's on the trait page	zsloan