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path: root/wqflask/base/webqtlConfig.py
AgeCommit message (Expand)Author
2022-10-14Add BXD_GROUP_EXCEPTIONS to webqtlConfig.py instead of having the groups hard...zsloan
2022-08-31add new environment variable:TEXTDIRAlexander_Kabui
2021-04-30autopep8: Run autopep8 100 times with target rulesBonfaceKilz
2021-04-30autopep8: Fix E20-E27BonfaceKilz
2021-03-17Added the RRID urls for mouse and rat to webqtlConfigzsloan
2021-02-18Changed DEFAULT_PERMISSIONS AND SUPER_PERMISSIONS to not have permissions be ...zsloan
2021-02-18Fixed SUPER_PRIVILEGES and DEFAULT_PRIVILEGESzsloan
2020-07-25Removing bimbam check. We'll get rid of bimbam anyway.Pjotr Prins
2020-06-20Added some admin functionality and fixed issue with temp traitszsloan
2020-05-21Made search result table width variable again and fixed row highlighting, tho...zsloan
2019-12-17Added RGD link to trait page and removed Genotation link since it isn't workingzsloan
2019-10-18Added UniProt link and fixed issue that caused sample lists to not be formed ...zsloan
2019-08-22Changed header drop-down menu layoutzsloan
2019-07-03Fixed bug for creating one of the third party links on the trait pagezsloan
2019-06-04Added GeneMANIA linkzsloan
2019-05-14Added all of the third party links from GN1zsloan
2018-10-24- SNP Browser is mostly complete; just need to test more and add SNP density ...zsloan
2018-04-09Removed some unused code in webqtlConfig; some might need to be added back in...zsloan
2018-02-10Check for bimbam path and bail out if it is missingPjotr Prins
2017-11-06Replaced Histogram and Bar Chart with Plotly version and added new Box Plot w...zsloan
2017-08-29Mostly changes related to getting gemma working with covariates and BIMBAM fi...zsloan
2017-05-21Merge from the diet branch.Pjotr Prins
2017-04-05- Temporary traits can be created, viewed, and added to collectionszsloan
2016-10-07Saner handling of TMPDIR and TEMPDIRPjotr Prins
2016-09-25tools: export GENENETWORK_FILES and move cache into TMPDIR/gn2Pjotr Prins
2016-09-10Support for running maintenance scripts so they can pick up all webserver set...Pjotr Prins
2016-06-17Removed trailing spaces in .py and .js filesPjotr Prins
2016-05-31Allow the json dir to be in the old location.Pjotr Prins
2016-05-26Issue with certain samples (like BXD65a, ones were there are multiple for a s...zsloan
2016-05-23Reaper mapping results are now correct and account for samples with two names...zsloan
2016-05-13Removing ref. to HTMLPATHPjotr Prins
2016-05-13WebqtlConfig.py: Constant handlingPjotr Prins
2016-05-13Fix paths for imagesPjotr Prins
2016-04-20Add filePjotr Prins
2016-02-25fixed untracked fileszsloan
2015-12-14GN1 mapping full genome figure now correct for pylmm and output to web pagezsloan
2015-12-12Changed loop drawing qtl curve to fix some issues; still need to make it draw...zsloan
2015-07-09Mapping methods now check for existing genotype files.zsloan
2015-03-27Changed HTMLPATH in webqtlConfig since I forgot to in the last commit (since ...zsloan
2015-03-25Pair scan image now loads properlyzsloan
2015-03-24Change back port location and home directory location; this should be in exte...zsloan
2015-03-23Updates to make GN2 work on my version of penguin (ports, and paths)DannyArends
2013-08-07Fixed things with the dataset dropdowns and mRNA datasetsZachary Sloan
2013-07-19Created file gen_group_samplelists that iterates through all genofilesZachary Sloan
2013-07-18Added Amelie's rat data genotypesZachary Sloan
2013-07-18Added to installation notesZachary Sloan
2013-06-13Merge /home/sam/gene into flaskZachary Sloan
2013-04-17Created file with pickled SNPIterator (from input.py) dataZachary Sloan
2013-04-02pylmm code is running for human data (plink .bed genotype files)Zachary Sloan
2013-02-07Added code to marker_regression.py that creates the numpy arrays toZachary Sloan
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