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2024-04-02Display a history page containing all the edits.•••* gn2/wqflask/edit.py (__fetch_dataset_git_history__): New function. (view_history): New end-point. * gn2/wqflask/templates/dataset.html: Use htmx to fetch history. * gn2/wqflask/templates/dataset_history.html: New history page. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-04-02Use the dataset id to fetch the authorisation roles.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-04-02Load the edit page on the same page using HTMX.•••* gn2/wqflask/templates/dataset.html: Delete target="_blank" for the edit links. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-04-02Properly chain all the git and write operations together.•••* gn2/wqflask/edit.py (save_dataset_metadata): Chain running the git commands and the write operation together. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-04-02Refactor __run_cmd into private function __run_cmd__.•••* gn2/wqflask/edit.py: Import Right. Delete curry. (save_dataset_metadata)[__run_cmd]: Move this... (__run_cmd__): ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-04-02Add a "View History" link.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-27Add some styling to gnqa answer page.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Fix htmx swap.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Delete unused javascript in gnqa page.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Add missing braces/brackets.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Enable auto-complete in form.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Clean up gnqa answer page.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Delete unused template.•••* gn2/wqflask/templates/pubmed_modal.html: Delete. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Delete llm.css and it's references.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Require ouath2 for gnqa history search.•••* gn2/wqflask/views.py (gnqna_hist): Add "require_oauth2" decorator. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Add htmx indicator.•••Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-27Add some styling to AI search bar.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Move search box to below the header.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Wrap "search" block round entire div that nests the search box.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Format files.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Re-locate gnqa search box to gnqa.html.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Require log-in to use the gn-qa search system.•••* gn2/wqflask/views.py: Import require_oauth2. (gnqna): Add "require_oauth2" decorator. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Clean up base.html.•••* gn2/wqflask/templates/base.html: Replace TABS with white-space. Fix hanging html tags. Format file. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Rework GN-QA landing page.•••Co-authored-by: Alexander Kabui <alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-27Fix mark-up in gn-qa landing page.•••Co-authored-by: Alexander Kabui <Alexanderkabua@gmail.com> Munyoki Kilyungi
2024-03-26Patch correct module to fix tests.Frederick Muriuki Muriithi
2024-03-26Revert "bug: gn2.wqflask.resource_manager has no `requests` defined"•••This reverts commit dde660453fc402b020178db41d136334a1b91b89. Frederick Muriuki Muriithi
2024-03-26Revert "Update test function signatures and remove obsolete tests."•••This reverts commit 77af7c016749998d62b769bdd24069f511925ef9. Frederick Muriuki Muriithi
2024-03-26Update test function signatures and remove obsolete tests.Frederick Muriuki Muriithi
2024-03-26bug: gn2.wqflask.resource_manager has no `requests` defined•••gn2.wqflask.resource_manager module does not have a `requests` variable or function defined, leading to errors in the test. Frederick Muriuki Muriithi
2024-03-26Revert "Disable CaseAttributeId - because it needs an update to the database"•••This reverts commit 4539ef0297bb4b8c2954f250697c237069a16d64. This commit was ignoring the historical context that led to the changes in the schema of the `CaseAttribute*` tables, and leads to errors when the database schema is updated. Frederick Muriuki Muriithi
2024-03-26Add missing docstrings to save/metadata_edit functions.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Add "dataset.name" field to the editor form.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Only display the "edit" link when a user has edit permissions.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Add a final fallback for match expression.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Use correct variable name.•••* gn2/wqflask/oauth2/client.py (no_token_post): "uri" does not exist. Replace it with "uri_path." Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Delete unused variable.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Use "require_oauth2_edit_resource_access" for edit/save endpoints.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Implement "require_oauth2_edit_resource_access" decorator.•••* gn2/wqflask/oauth2/checks.py (require_oauth2): New function. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Replace "__" prefix for with "_".•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Import user_logged_in from the clients module.•••Importing "user_logged_in" in the checks module just to export adds a layer of indirection and makes the code hard to read. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Delete repetitive statement in "render_ui".•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Remove unused imports.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Auto-pep8 (using flake8) file.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Replace "login_required" with "require_oauth2".•••* gn2/wqflask/edit.py: Replace "login_required" import with "require_oauth2". (metadata_edit): Replace "login_required" with "require_oauth2". (edit): Ditto. (save): Ditto. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Remove unused declared variable.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Remove typo from template.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Add extra "edit" buttons to the relevant sections.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Make the description bold.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi
2024-03-26Reset repo and pull then write changes before committing.•••* gn2/wqflask/edit.py: Import session_info. (save_dataset_metadata): Add author as an argument. Reset repo and pull then write changes before committing. Split strings before __run_cmd is called. (metadata_edit): Rename "metadata" -> "__metadata". (save): Save the output to the correct path. Pass author to "save_dataset_metadata". Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Munyoki Kilyungi