| Age | Commit message (Expand) | Author |
|---|---|---|
| 2024-08-29 | Apply dj-lint jinja linter against genewiki.html.•••* gn2/wqflask/templates/genewiki.html: Run: ``` djlint gn2/wqflask/templates/genewiki.html \ --profile=jinja --reformat --format-css \ --format-js ``` Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-08-29 | Rename generif -> genewiki.•••Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-08-29 | Auto-pep8 file.•••* gn2/wqflask/views.py: Run auto-pep8 against file. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | Munyoki Kilyungi |
| 2024-08-29 | Add delete to monad requests http methods. | Alexander_Kabui |
| 2024-08-29 | Update docstring for put. | Alexander_Kabui |
| 2024-08-29 | Add put method to monad requests. | Alexander_Kabui |
| 2024-08-29 | Modify gnqna search method from post to put. | Alexander_Kabui |
| 2024-08-29 | Add htmx js api for delete functionality. | Alexander_Kabui |
| 2024-08-29 | integrate gnqa history delete functionality. | Alexander_Kabui |
| 2024-08-29 | Handle attributeError when getting error codes. | Alexander_Kabui |
| 2024-08-29 | BugFix: return correct status code for generic exceptions handler. | Alexander_Kabui |
| 2024-08-29 | Fix bug: Update DOM correctly when rating error occurs. | Alexander_Kabui |
| 2024-08-29 | Mark answer and references as safe to render a tags. | Alexander_Kabui |
| 2024-08-29 | Add UI code for gnqa history search delete functionality. | Alexander_Kabui |
| 2024-08-29 | Update endpoints and add search history functionality. | Alexander_Kabui |
| 2024-08-29 | View file code cleanup for gnqa. | Alexander_Kabui |
| 2024-08-29 | Refactor template code for gnqa search history | Alexander_Kabui |
| 2024-08-28 | Allow '@' and '.' characters in searches•••This is mainly so e-mail searches work | zsloan |
| 2024-08-28 | Set fixed width of 500px for phenotype descriptions | zsloan |
| 2024-08-28 | Fix timestamp attribute names•••They were previously stored as 'created_timestamp' and 'changed_timestamp', but are now stored as 'created' and 'changed' | zsloan |
| 2024-08-28 | Edit Haplotype Analyst legend content•••- Change order from Pat/Mat to Mat/Pat - Increase width of example color bars - Change 'Unk' to 'Unknown' and shift everything to the left so it fits | zsloan |
| 2024-08-28 | Change 'Sequence Site' text to 'Gene Location' | zsloan |
| 2024-08-28 | Only draw position marker if position exists•••Previous it was drawing the marker at the end of the map even when mapping with traits that don't have a position (like Publish/phenotype traits) | zsloan |
| 2024-08-28 | Remove javascript escape function from View Collection page to fix encoding i... | zsloan |
| 2024-08-28 | Add Wiki and RIF search terms to Xapian normal search | zsloan |
| 2024-08-28 | chore: remove passing bearer token to end user | John Nduli |
| 2024-08-28 | fix: remove bearer token from html and javascript | John Nduli |
| 2024-08-28 | fix: use bearer token to query auth server | John Nduli |
| 2024-08-28 | fix: pass in proper list of priviledge_ids | John Nduli |
| 2024-08-28 | Fix typo. | Frederick Muriuki Muriithi |
| 2024-08-28 | minor code formatting. | Frederick Muriuki Muriithi |
| 2024-08-28 | Update JWKs endpoint documentation. | Frederick Muriuki Muriithi |
| 2024-08-28 | Fix URL | Frederick Muriuki Muriithi |
| 2024-08-28 | Override 'client_secret_post' auth with a JSON equivalent•••In order to use JSON consistently across the board, we make even the authentication method use JSON rather than FORMDATA. | Frederick Muriuki Muriithi |
| 2024-08-28 | Move check for target_trait mb/chr into the if statement for ProbeSet/Geno da...•••Previously it would throw an error for Publish datasets, since they don't have a location | zsloan |
| 2024-08-28 | Consistently use JSON for all endpoints. | Frederick Muriuki Muriithi |
| 2024-08-28 | Remove obsolete configurations. | Frederick Muriuki Muriithi |
| 2024-08-28 | bug: add missing `count_per_page` variable. | Frederick Muriuki Muriithi |
| 2024-08-28 | Use auto-created and auto-rotated JSON Web Keys•••Use auto-created JWKs for better security. | Frederick Muriuki Muriithi |
| 2024-08-28 | Use JWKs from auth server public endpoint•••* Fetch keys from auth server * Validate token is signed with one of the keys from server * Ensure refreshing of token is still synchronised | Frederick Muriuki Muriithi |
| 2024-08-28 | Add module to help with rotation of JSON Web Keys. | Frederick Muriuki Muriithi |
| 2024-08-28 | Fix correlation bug caused by a result trait not having a location | zsloan |
| 2024-08-28 | Fix misnamed variable that caused correlation location filter to not work | zsloan |
| 2024-08-28 | Fix collections import by allowing GET method for collections/add endpoint | zsloan |
| 2024-08-28 | Improve logging•••Add more logging information to help with tracking and fixing bugs. | Frederick Muriuki Muriithi |
| 2024-08-28 | Synchronise token refreshes•••The application can be run in a multi-threaded server, leading to a situation where the multiple threads attempt to get a new JWT using the exact same refresh token. This synchronises the various threads ensuring only a single thread is able to retrieve the new JWT that all the rest of the threads then use. | Frederick Muriuki Muriithi |
| 2024-08-28 | Fix GN3 URIs for case attribute editing•••Also improve error logging somewhat (but still need to properly display the error in a template) | zsloan |
| 2024-08-28 | Include trait and dataset name in hmac passed to search results page for non-...•••Previously it only had the hmac, which caused adding to a collection to not work for such searches | zsloan |
| 2024-08-28 | Include CaseAttribute.InbredSetId in the query that fetches case attributes•••Previously issues could occur if a difference InbredSet had the same CaseAtribute Id | zsloan |
| 2024-08-28 | Add BXD-JAX-OFS to BXD_GROUP_EXCEPTION | zsloan |
 |
index : genenetwork2 | |
| GeneNetwork (2nd generation) |
| aboutsummaryrefslogtreecommitdiff |