Age | Commit message (Collapse) | Author | |
---|---|---|---|
2016-05-13 | Fix paths for images | Pjotr Prins | |
2016-05-13 | Nginx configuration | Pjotr Prins | |
2016-05-13 | Added IRC log | Pjotr Prins | |
2016-05-13 | Added IRC log | Pjotr Prins | |
2016-05-11 | README: nginx | Pjotr Prins | |
2016-05-11 | nginx: add README info | Pjotr Prins | |
2016-05-11 | Nginx configuration example | Pjotr Prins | |
2016-05-10 | Correlation successfully uses materialized views and parallel processing, ↵ | zsloan | |
but for some reason is taking an immense amount of time so need to troubleshoot that Changed order of mapping options to display Interval Mapping first Changed some links to no longer open in new tab/window | |||
2016-05-10 | Merge branch 'master' of github.com:genenetwork/genenetwork2 into merge_zach | Pjotr Prins | |
2016-04-29 | Fixed database link in trait page details | zsloan | |
2016-04-29 | Also fixed links in statistics section (for normal probability plot) and ↵ | zsloan | |
removed 'target=_blank's | |||
2016-04-29 | Fixed links in correlation descriptions on trait page and removed ↵ | zsloan | |
target=_blank (so will not open in new window unless user specifies) Fixed javascript so description changes when user changes the method and "Type" option is removed for literature correlation | |||
2016-04-29 | URL: removed _blank from first URL | Pjotr Prins | |
2016-04-29 | README: on missing modules | Pjotr Prins | |
2016-04-29 | Updated mailing list URL | Pjotr Prins | |
2016-04-29 | Plotting: using cairo-png for headless environments | Pjotr Prins | |
2016-04-29 | Merge | Pjotr Prins | |
2016-04-28 | Added option to export permutation results for mapping page | zsloan | |
Added data_scale to dataset objects and basic stats table will now check data scale when calculating range Made interval analyst results table work with datatables Changed the appearance of the basic stats table some by giving it a border | |||
2016-04-28 | README | Pjotr Prins | |
2016-04-28 | Test: splitting out static URL tests | Pjotr Prins | |
2016-04-28 | Test: splitting out static URL tests | Pjotr Prins | |
2016-04-28 | Changed the defunct GeneRIF URL to a working Wikipedia URL (which | Pjotr Prins | |
also points to the non-working NCBI link) | |||
2016-04-27 | test: test for broken links | Pjotr Prins | |
2016-04-27 | Test: get to trait page | Pjotr Prins | |
2016-04-26 | Test: main page and first search | Pjotr Prins | |
2016-04-26 | Interval mapping: fix font and image path | Pjotr Prins | |
2016-04-26 | README: add environment paths info | Pjotr Prins | |
2016-04-26 | Merging with Zach's latest branch | Pjotr Prins | |
2016-04-25 | Interval Analyst table mostly working, just need to work out a few more things | zsloan | |
2016-04-22 | Fixed issue where manhattan plot setting wasn't being carried over to single ↵ | zsloan | |
chromosome view for mapping results Removed a useless "if 1 == 1" line that was in marker_regression_gn1.py for testing. | |||
2016-04-20 | Interval Mapping now correctly does interval mapping if Marker Regression ↵ | zsloan | |
isn't checked (it used to just "connect the dots" of the marker regression output) Changed "Manhattan Plot" label to "Marker Regr." to accurately reflect what the option does | |||
2016-04-20 | Added borders to stats table in trait page | zsloan | |
2016-04-20 | Fix typo | Pjotr Prins | |
2016-04-20 | A few fixes to get the webserver running again | Pjotr Prins | |
2016-04-20 | Add file | Pjotr Prins | |
2016-04-20 | No longer ignore webqtlConfig.py - it should be genereic anyway | Pjotr Prins | |
2016-04-20 | Database information | Pjotr Prins | |
2016-04-20 | README: point to gn-latest SHA values | Pjotr Prins | |
2016-04-20 | trasnform to transform | DannyArends | |
2016-04-20 | Main README | Pjotr Prins | |
2016-04-20 | README | Pjotr Prins | |
2016-04-20 | Changed the file stem of generated pictures to CTL | DannyArends | |
2016-04-20 | Adding small figures per trait, so that users can see CTL and QTL for each ↵ | DannyArends | |
individual phenotype | |||
2016-04-20 | Adding parameters, and passing them to the CTL algorithm | DannyArends | |
2016-04-20 | Working on the output template of CTL | DannyArends | |
2016-04-20 | Updates to the CTL code adding the significant results to the result object | DannyArends | |
2016-04-20 | Cleaning code, adding comments | DannyArends | |
2016-04-20 | Adding the lineplot image to the output | DannyArends | |
2016-04-20 | Adding code to do initial CTL mapping (working on the BXD) | DannyArends | |
2016-04-20 | Parsing the names of the individuals, and coding H as -999 | DannyArends | |