aboutsummaryrefslogtreecommitdiff
AgeCommit message (Expand)Author
2022-03-18Merge pull request #671 from Alexanderlacuna/feature/gn3-pcaAlexander Kabui
2022-03-18Apply "python-black" on fileBonfaceKilz
2022-03-18Remove outdated integration tests on different login mechanismsBonfaceKilz
2022-03-18Delete deprecated modulesBonfaceKilz
2022-03-18Delete "app" import in MRBonfaceKilz
2022-03-18Document configurationsFrederick Muriuki Muriithi
2022-03-17Fix/change Authors column in phenotype search resultszsloan
2022-03-17Set min-width for table container, so the table never ends up so narrow it lo...zsloan
2022-03-17Fix authentication for phenotype search resultszsloan
2022-03-17Lint some test filesBonfaceKilz
2022-03-17Fix failing testBonfaceKilz
2022-03-17Create a db connection correctlyBonfaceKilz
2022-03-17Skip unittestsBonfaceKilz
2022-03-17Replace "g.db" object with a proper database connectionBonfaceKilz
2022-03-17Delete dead codeBonfaceKilz
2022-03-17Delete unused "logger" importBonfaceKilz
2022-03-17Document how to run testsFrederick Muriuki Muriithi
2022-03-17Provide path to default settings/configuration file as a fallbackFrederick Muriuki Muriithi
2022-03-16Remove unnecessary print statementzsloan
2022-03-16Replace top comment with docstringzsloan
2022-03-16Add code generating the new genotype fileszsloan
2022-03-16Generate JSON file for target genotypeszsloan
2022-03-16Fix the way target/source genofiles were being processed + some other changeszsloan
2022-03-16Add function for mapping strain to sample pos + begin creating generate_new_g...zsloan
2022-03-16Add function for getting strain name from sample namezsloan
2022-03-16Change EOL from CRLF to LFzsloan
2022-03-16Minor changes/bug fixeszsloan
2022-03-16Add in-progress gen_ind_genofiles.pyzsloan
2022-03-16Delete unused issue templatesBonfaceKilz
2022-03-16Delete GitHub CI runnerBonfaceKilz
2022-03-14instantiate plotly objectAlexander Kabui
2022-03-14add custom configs for scree plotAlexander Kabui
2022-03-14add scree plot dataAlexander Kabui
2022-03-14add scree plot layoutAlexander Kabui
2022-03-14add plotlyAlexander Kabui
2022-03-14init scree plot templateAlexander Kabui
2022-03-14Warn when someone uploads a csv file that has columns not in the dbBonfaceKilz
2022-03-14Remove button for "Edit Privileges"BonfaceKilz
2022-03-14Reword link text for downloading csv sample dataBonfaceKilz
2022-03-12Use "database_connection" within a context-managerBonfaceKilz
2022-03-12Remove unused importsBonfaceKilz
2022-03-12Close a connection after it's useBonfaceKilz
2022-03-12Use updated `update_sample_data` from gn3BonfaceKilz
2022-03-12Use updated `delete_sample_data` from gn3BonfaceKilz
2022-03-12Use updated `insert_sample_data` from gn3BonfaceKilz
2022-03-12Fix broken f-stringsBonfaceKilz
2022-03-12Replace `db.traits` with `db.sample_data`BonfaceKilz
2022-03-12display_diffs.html: Display the csv columns header in the diffs pageBonfaceKilz
2022-03-12metadata_edits.py: Use `csv_diff` and `remove_insignificant_edits`BonfaceKilz
2022-03-12metadata_edits.py: Use "create_dirs_if_not_exists" for creating dirsBonfaceKilz