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Added more info to trait details for phenotype traits
Changed order of mapping methods
Fixed layout of mapping loading screen to hopefully be centered on different screen sizes
Improved layout of some elements in mapping results page
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Merge some older commits
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throw an error
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problem preventing it from working)
Added some code related to new plotly probability plot, though it's commented out until it looks how I want it to
Added some code for adding the BNW link to GN2, though it's not working yet
Updated dataset menu structure JSON file
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(though there's still a minor issue with a few datasets)
Added some header data to mapping output file
Fixed links in Network Group nodes/edges
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improved scatter plots
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with Plotly
GEMMA now has option to select genotypes
Updated dataset select dropdowns to be ordered correctly
Fixed dataset select dropdowns for correlations to not show confidential datasets
Added Skewness and Kurtosis to Basic Statistics table
Fixed Verify and RNA-seq buttons on trait page
Temporarily hardcoded Reference page until we get it to link with database
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chromosome view
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do more testing
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./bin/genenetwork2: add GEM_PATH for gemma-wrapper
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gemma-wrapper: find binary in profile
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file format
Other changes include:
- Fixing links in the network graph
- Changing button colors on show trait page
- Changing color scheme for heatmap
- Making rows highlight in yellow when clicked on
- Some changes to table appearance (like giving gene global search a horizontal scroll)
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Variety of changes
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Scatterplot Matrix works again
Added the first few changes to get covariates working (not done yet)
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Correlation Scatterplot updates
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