diff options
Diffstat (limited to 'wqflask')
| -rw-r--r-- | wqflask/wqflask/correlation/pre_computes.py | 11 |
1 files changed, 11 insertions, 0 deletions
diff --git a/wqflask/wqflask/correlation/pre_computes.py b/wqflask/wqflask/correlation/pre_computes.py index cb2f4470..95047fc7 100644 --- a/wqflask/wqflask/correlation/pre_computes.py +++ b/wqflask/wqflask/correlation/pre_computes.py @@ -167,3 +167,14 @@ def get_datasets_data(base_dataset, target_dataset_data): samples_fetched, base_traits_data) return (target_results, base_results) + +def fetch_text_file(dataset_name, text_dir, conn): + """fetch textfiles with strain vals if exists""" + with conn.cursor() as cursor: + query = 'SELECT Id, FullName FROM ProbeSetFreeze WHERE Name = "%s"' % dataset_name + cursor.execute(query) + results = cursor.fetchone() + if (results): + for file in os.listdir(text_dir): + if file.startswith(f"ProbeSetFreezeId_{results[0]}_"): + return os.path.join(text_dir, file) |