diff options
Diffstat (limited to 'wqflask/wqflask/my_pylmm/pyLMM/runlmm.py')
| -rw-r--r-- | wqflask/wqflask/my_pylmm/pyLMM/runlmm.py | 8 |
1 files changed, 8 insertions, 0 deletions
diff --git a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py index 52c3c80a..6b241cd6 100644 --- a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py +++ b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py @@ -21,6 +21,14 @@ from optparse import OptionParser import sys import tsvreader import numpy as np + +# Add local dir to PYTHONPATH +import os +cwd = os.path.dirname(__file__) +if sys.path[0] != cwd: + sys.path.insert(1,cwd) + +# pylmm modules from lmm import gn2_load_redis, gn2_load_redis_iter, calculate_kinship_new, run_gwas from kinship import kinship, kinship_full import genotype |