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authorzsloan2018-10-01 16:09:47 +0000
committerzsloan2018-10-01 16:09:47 +0000
commita3365dae23f204e489939d3defc55edc1b4872d8 (patch)
treed4b06818cd0af291cfa34a484e25a6c07621f1ea /wqflask/utility
parentee8e1eacd88399609f530a33e2d91cf7895da5b0 (diff)
downloadgenenetwork2-a3365dae23f204e489939d3defc55edc1b4872d8.tar.gz
- Can now remove cofactors from correlation scatterplot and select them by just clicking their row in collection
- Cofactor color picker now works in Safari/Macs - Displays N for relevant samples in trait page sample table - Don't show bar chart when N>256 - Mapping loading page contents better centered - Anonymous collections timeout correctly listed as 30 days now - Minor allele frequency can actually be changed for GEMMA now (previously didn't work) - Fixed transcript position marker location for mapping results - Notifies user if their e-mail isn't associated with an account when they attempt to request forgotten password - Users can now map with submitted traits - Histogram width changes depending upon number of bins (need to improve this still) - Improved Q-q plot (previously called "probability plot")
Diffstat (limited to 'wqflask/utility')
-rw-r--r--wqflask/utility/helper_functions.py8
1 files changed, 7 insertions, 1 deletions
diff --git a/wqflask/utility/helper_functions.py b/wqflask/utility/helper_functions.py
index cf16879f..1c8dad10 100644
--- a/wqflask/utility/helper_functions.py
+++ b/wqflask/utility/helper_functions.py
@@ -14,7 +14,13 @@ logger = logging.getLogger(__name__ )
def get_species_dataset_trait(self, start_vars):
#assert type(read_genotype) == type(bool()), "Expecting boolean value for read_genotype"
- self.dataset = data_set.create_dataset(start_vars['dataset'])
+ if "temp_trait" in start_vars.keys():
+ if start_vars['temp_trait'] == "True":
+ self.dataset = data_set.create_dataset(dataset_name = "Temp", dataset_type = "Temp", group_name = start_vars['group'])
+ else:
+ self.dataset = data_set.create_dataset(start_vars['dataset'])
+ else:
+ self.dataset = data_set.create_dataset(start_vars['dataset'])
logger.debug("After creating dataset")
self.species = TheSpecies(dataset=self.dataset)
logger.debug("After creating species")