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author | zsloan | 2020-10-29 14:35:09 -0500 |
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committer | zsloan | 2020-10-29 14:35:09 -0500 |
commit | 7c1c9e2a519ba662e9f293eea73eb7922b2160e4 (patch) | |
tree | f6d4db465d338c1433bbb126e911062a6c31748b /wqflask/utility/gen_geno_ob.py | |
parent | 5a1f69aa85809768577069ae63d92c9ef6aecc02 (diff) | |
parent | 6e6911b466c2727b16a190d8b714f55d7842d7e2 (diff) | |
download | genenetwork2-7c1c9e2a519ba662e9f293eea73eb7922b2160e4.tar.gz |
Merge branch 'testing' of github.com:genenetwork/genenetwork2 into reaper_bootstrap_fix
Diffstat (limited to 'wqflask/utility/gen_geno_ob.py')
-rw-r--r-- | wqflask/utility/gen_geno_ob.py | 6 |
1 files changed, 2 insertions, 4 deletions
diff --git a/wqflask/utility/gen_geno_ob.py b/wqflask/utility/gen_geno_ob.py index 23b0b650..81085ffe 100644 --- a/wqflask/utility/gen_geno_ob.py +++ b/wqflask/utility/gen_geno_ob.py @@ -1,5 +1,3 @@ -from __future__ import absolute_import, division, print_function - import utility.logger logger = utility.logger.getLogger(__name__ ) @@ -175,7 +173,7 @@ class Locus(object): start_pos = 3 for allele in marker_row[start_pos:]: - if allele in geno_table.keys(): + if allele in list(geno_table.keys()): self.genotype.append(geno_table[allele]) else: #ZS: Some genotype appears that isn't specified in the metadata, make it unknown - self.genotype.append("U")
\ No newline at end of file + self.genotype.append("U") |