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authorPjotr Prins2020-04-26 13:20:13 -0500
committerPjotr Prins2020-04-26 13:20:13 -0500
commitc0909b461effecb8051020a4f186a40b8867b574 (patch)
tree8a910a67072299a48d70ff40e304641f4c1953b4 /wqflask/base/data_set.py
parentcdcfb086de9277a1c1b2d8de57ceb78ae8683f53 (diff)
parent14d49450c47e8ef3b34bca9e759acd371319a854 (diff)
downloadgenenetwork2-c0909b461effecb8051020a4f186a40b8867b574.tar.gz
Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing
Diffstat (limited to 'wqflask/base/data_set.py')
-rw-r--r--wqflask/base/data_set.py14
1 files changed, 5 insertions, 9 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py
index 8652e6b7..1f99df49 100644
--- a/wqflask/base/data_set.py
+++ b/wqflask/base/data_set.py
@@ -64,7 +64,7 @@ logger = getLogger(__name__ )
# Each subclass will add to this
DS_NAME_MAP = {}
-def create_dataset(dataset_name, rebuild=True, dataset_type = None, get_samplelist = True, group_name = None):
+def create_dataset(dataset_name, dataset_type = None, get_samplelist = True, group_name = None):
if not dataset_type:
dataset_type = Dataset_Getter(dataset_name)
@@ -77,7 +77,7 @@ def create_dataset(dataset_name, rebuild=True, dataset_type = None, get_sampleli
class Dataset_Types(object):
- def __init__(self, rebuild=False):
+ def __init__(self):
"""Create a dictionary of samples where the value is set to Geno,
Publish or ProbeSet. E.g.
@@ -93,13 +93,9 @@ Publish or ProbeSet. E.g.
"""
self.datasets = {}
- if rebuild: #ZS: May make this the only option
- data = json.loads(requests.get(GN2_BASE_URL + "/api/v_pre1/gen_dropdown").content)
- #data = gen_menu.gen_dropdown_json()
- else:
- file_name = "wqflask/static/new/javascript/dataset_menu_structure.json"
- with open(file_name, 'r') as fh:
- data = json.load(fh)
+ data = json.loads(requests.get(GN2_BASE_URL + "/api/v_pre1/gen_dropdown").content)
+ #data = gen_menu.gen_dropdown_json()
+
for species in data['datasets']:
for group in data['datasets'][species]: