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authorzsloan2017-11-06 22:10:34 +0000
committerzsloan2017-11-06 22:10:34 +0000
commitb2a3979f055492c0eef11253d669ee35c79c2004 (patch)
tree3dce3862172d2328b8640eacaee4aba7165e8d65 /wqflask/base/data_set.py
parente6a9a6719e03e2ac0acf328d29188ac00813e150 (diff)
parente3b27c18f379e969c06f8e0b79daf8b762d4fc1d (diff)
downloadgenenetwork2-b2a3979f055492c0eef11253d669ee35c79c2004.tar.gz
Merge branch 'testing' of https://github.com/genenetwork/genenetwork2
Diffstat (limited to 'wqflask/base/data_set.py')
-rw-r--r--wqflask/base/data_set.py9
1 files changed, 6 insertions, 3 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py
index dbdbb51c..6649f8af 100644
--- a/wqflask/base/data_set.py
+++ b/wqflask/base/data_set.py
@@ -111,7 +111,7 @@ Publish or ProbeSet. E.g.
new_type = "ProbeSet"
self.datasets[short_dataset_name] = new_type
# Set LOG_LEVEL_DEBUG=5 to see the following:
- logger.debugf(5,"datasets",self.datasets)
+ logger.debugf(5, "datasets",self.datasets)
def __call__(self, name):
return self.datasets[name]
@@ -426,13 +426,15 @@ def datasets(group_name, this_group = None):
FROM PublishFreeze,InbredSet
WHERE PublishFreeze.InbredSetId = InbredSet.Id
and InbredSet.Name = '%s'
- and PublishFreeze.public > %s)
+ and PublishFreeze.public > %s
+ and PublishFreeze.confidentiality < 1)
UNION
(SELECT '#GenoFreeze',GenoFreeze.FullName,GenoFreeze.Name
FROM GenoFreeze, InbredSet
WHERE GenoFreeze.InbredSetId = InbredSet.Id
and InbredSet.Name = '%s'
- and GenoFreeze.public > %s)
+ and GenoFreeze.public > %s
+ and GenoFreeze.confidentiality < 1)
UNION
(SELECT Tissue.Name, ProbeSetFreeze.FullName,ProbeSetFreeze.Name
FROM ProbeSetFreeze, ProbeFreeze, InbredSet, Tissue
@@ -441,6 +443,7 @@ def datasets(group_name, this_group = None):
and ProbeFreeze.InbredSetId = InbredSet.Id
and InbredSet.Name like %s
and ProbeSetFreeze.public > %s
+ and ProbeSetFreeze.confidentiality < 1
ORDER BY Tissue.Name, ProbeSetFreeze.CreateTime desc, ProbeSetFreeze.AvgId)
''' % (group_name, webqtlConfig.PUBLICTHRESH,
group_name, webqtlConfig.PUBLICTHRESH,