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author | Pjotr Prins | 2016-02-24 11:25:10 +0000 |
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committer | Pjotr Prins | 2016-04-20 09:16:44 +0000 |
commit | 31a1c126185adb747028d035717ad72728a52b0e (patch) | |
tree | 05391053049ba4085b93865a9bfe65cb1b5fd3cd /wqflask/base/data_set.py | |
parent | 5fffa1aa4260af6663c1f9b4cf7494d3ebc6995d (diff) | |
download | genenetwork2-31a1c126185adb747028d035717ad72728a52b0e.tar.gz |
-a
[PATCH 038/100] Fix compile errors
Diffstat (limited to 'wqflask/base/data_set.py')
-rwxr-xr-x | wqflask/base/data_set.py | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py index 6527657a..8b2a9f01 100755 --- a/wqflask/base/data_set.py +++ b/wqflask/base/data_set.py @@ -44,7 +44,7 @@ from dbFunction import webqtlDatabaseFunction from utility import webqtlUtil from utility.benchmark import Bench from utility import chunks -from utility.tools import locate, locate_without_error +from utility.tools import locate, locate_ignore_error from maintenance import get_group_samplelists @@ -405,8 +405,8 @@ class DatasetGroup(object): else: print("Cache not hit") - genotype_fn = locate_without_error(self.name+".geno",'genotype') - mapping_fn = locate_without_error(self.name+".fam",'mapping') + genotype_fn = locate_ignore_error(self.name+".geno",'genotype') + mapping_fn = locate_ignore_error(self.name+".fam",'mapping') if mapping_fn: self.samplelist = get_group_samplelists.get_samplelist("plink", mapping_fn) elif genotype_fn: |