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author | zsloan | 2020-10-08 15:32:18 -0500 |
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committer | zsloan | 2020-10-08 15:32:18 -0500 |
commit | 217f527e873d5197c7efcaec627e1df5afadefa4 (patch) | |
tree | 81c07fa8db94cc477a4f021253cdaf8d8dc83ad2 /wqflask/base/data_set.py | |
parent | 5880b399efbc0175e726be5a61945c30a5fe6260 (diff) | |
download | genenetwork2-217f527e873d5197c7efcaec627e1df5afadefa4.tar.gz |
Fixed issue where new phenotype groups wouldn't be saved to the self.datasets property because the group name was used as the key (instead of the group name + "Publish", which is the full dataset name for phenotypes)
* wqflask/base/data_set.py - Set "group_name" as a separate variable from "name" to avoid it being used as the key in self.datasets
Diffstat (limited to 'wqflask/base/data_set.py')
-rw-r--r-- | wqflask/base/data_set.py | 5 |
1 files changed, 3 insertions, 2 deletions
diff --git a/wqflask/base/data_set.py b/wqflask/base/data_set.py index e0ef559c..aeafc027 100644 --- a/wqflask/base/data_set.py +++ b/wqflask/base/data_set.py @@ -150,10 +150,11 @@ Publish or ProbeSet. E.g. "geno": "Geno", } + group_name = name if t in ['pheno', 'other_pheno']: - name = name.replace("Publish", "") + group_name = name.replace("Publish", "") - if bool(len(g.db.execute(sql_query_mapping[t].format(name)).fetchone())): + if bool(len(g.db.execute(sql_query_mapping[t].format(group_name)).fetchone())): self.datasets[name] = dataset_name_mapping[t] self.redis_instance.set("dataset_structure", json.dumps(self.datasets)) return True |