Add all the source codes into the github.

1 files changed, 130 insertions, 0 deletions

diff --git a/web/webqtl/management/managerMainPage.py b/web/webqtl/management/managerMainPage.py
new file mode 100755
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+++ b/web/webqtl/management/managerMainPage.py
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+# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
+#
+# This program is free software: you can redistribute it and/or modify it
+# under the terms of the GNU Affero General Public License
+# as published by the Free Software Foundation, either version 3 of the
+# License, or (at your option) any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+# See the GNU Affero General Public License for more details.
+#
+# This program is available from Source Forge: at GeneNetwork Project
+# (sourceforge.net/projects/genenetwork/).
+#
+# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
+# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
+#
+#
+#
+# This module is used by GeneNetwork project (www.genenetwork.org)
+#
+# Created by GeneNetwork Core Team 2010/08/10
+#
+# Last updated by GeneNetwork Core Team 2010/10/20
+
+import os
+
+from htmlgen import HTMLgen2 as HT
+
+from base.templatePage import templatePage
+from utility import webqtlUtil
+from base import webqtlConfig
+
+#XZ, 02/06/2009: Xiaodong created this class
+class managerMainPage(templatePage):
+
+    def __init__(self, fd):
+
+        templatePage.__init__(self, fd)
+
+        if not self.openMysql():
+            return
+
+        ifVerified = None
+
+        ifVerified = fd.formdata.getvalue('ifVerified')
+
+        if ifVerified != 'GN@UTHSC':
+            user = fd.formdata.getvalue('user')
+            password = fd.formdata.getvalue('password')
+            privilege, user_id, userExist = webqtlUtil.authUser(user,password,self.cursor,encrypt = None)[:3]
+
+            if userExist and webqtlConfig.USERDICT[privilege] >= webqtlConfig.USERDICT['admin']:
+                ifVerified = True
+
+
+        if not ifVerified:
+            heading = "Error page"
+            detail = ["You do not have privilege to change system configuration."]
+            self.error(heading=heading,detail=detail)
+            return
+	else:
+            TD_LR = HT.TD(height=200,width="100%", bgColor='#eeeeee')
+            
+            heading = "Please click button to make your selection"
+
+            createUserAccountForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='createUserAccountForm', submit=HT.Input(type='hidden'))
+            createUserAccountForm.append(
+                HT.Input(type='button', name='', value='Manage User Accounts', Class="button", onClick="submitToNewWindow(this.form);"),
+                HT.Input(type='hidden',name='FormID',value='createUserAccount'),
+                HT.Input(type='hidden',name='ifVerified',value='GN@UTHSC')
+            )
+
+            assignUserToDatasetForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='assignUserToDatasetForm', submit=HT.Input(type='hidden'))
+            assignUserToDatasetForm.append(
+                HT.Input(type='button', name='', value='Manage Confidential Datasets', Class="button", onClick="submitToNewWindow(this.form);"),
+                HT.Input(type='hidden',name='FormID',value='assignUserToDataset'),
+                HT.Input(type='hidden',name='ifVerified',value='GN@UTHSC')
+            )
+
+            deletePhenotypeTraitForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='deletePhenotypeTraitForm', submit=HT.Input(type='hidden'))
+            deletePhenotypeTraitForm.append(
+                HT.Input(type='button', name='', value='Delete Phenotype Trait', Class="button", onClick="submitToNewWindow(this.form);"),
+                HT.Input(type='hidden',name='FormID',value='deletePhenotypeTrait'),
+                HT.Input(type='hidden',name='ifVerified',value='GN@UTHSC'),
+                HT.Input(type='hidden',name='status',value='input')
+            )
+
+            exportPhenotypeDatasetForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='exportPhenotypeDatasetForm', submit=HT.Input(type='hidden'))
+            exportPhenotypeDatasetForm.append(
+                HT.Input(type='button', name='', value='Export Phenotype Dataset', Class="button", onClick="submitToNewWindow(this.form);"),
+                HT.Input(type='hidden',name='FormID',value='exportPhenotypeDataset'),
+                HT.Input(type='hidden',name='ifVerified',value='GN@UTHSC'),
+                HT.Input(type='hidden',name='status',value='input')
+            )
+
+            updateGenotypeForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='updateGenotypeForm', submit=HT.Input(type='hidden'))
+            updateGenotypeForm.append(
+                HT.Input(type='button', name='', value='Update Genotype', Class="button", onClick="submitToNewWindow(this.form);"),
+                HT.Input(type='hidden',name='FormID',value='updGeno'),
+                HT.Input(type='hidden',name='ifVerified',value='GN@UTHSC')
+            )
+
+            editHeaderForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='editHeaderForm', submit=HT.Input(type='hidden'))
+            editHeaderForm.append(
+                HT.Input(type='button', name='', value='Edit Header', Class="button", onClick="submitToNewWindow(this.form);"),
+		HT.Input(type='hidden', name='FormID', value='editHeaderFooter'),
+		HT.Input(type='hidden', name='hf', value='h'),
+            )
+
+            editFooterForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='editFooterForm', submit=HT.Input(type='hidden'))
+            editFooterForm.append(
+                HT.Input(type='button', name='', value='Edit Footer', Class="button", onClick="submitToNewWindow(this.form);"),
+                HT.Input(type='hidden', name='FormID', value='editHeaderFooter'),
+		HT.Input(type='hidden', name='hf', value='f'),
+            )
+
+            TD_LR.append(heading, HT.P(),HT.P(), 
+			createUserAccountForm, HT.P(),HT.P(), 
+			assignUserToDatasetForm, HT.P(),HT.P(), 
+			deletePhenotypeTraitForm, HT.P(),HT.P(), 
+			exportPhenotypeDatasetForm, HT.P(),HT.P(),
+                        updateGenotypeForm, HT.P(),HT.P(),
+			editHeaderForm, HT.P(),HT.P(),
+			editFooterForm)
+
+            self.dict['body'] =  str(TD_LR)
+            self.dict['title'] =  'Manager Main Page'
+