Add all the source codes into the github.

1 files changed, 108 insertions, 0 deletions

diff --git a/web/webqtl/collection/RemoveSelectionPage.py b/web/webqtl/collection/RemoveSelectionPage.py
new file mode 100755
index 00000000..b9560c6b
--- /dev/null
+++ b/web/webqtl/collection/RemoveSelectionPage.py
@@ -0,0 +1,108 @@
+# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
+#
+# This program is free software: you can redistribute it and/or modify it
+# under the terms of the GNU Affero General Public License
+# as published by the Free Software Foundation, either version 3 of the
+# License, or (at your option) any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+# See the GNU Affero General Public License for more details.
+#
+# This program is available from Source Forge: at GeneNetwork Project
+# (sourceforge.net/projects/genenetwork/).
+#
+# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
+# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
+#
+#
+#
+# This module is used by GeneNetwork project (www.genenetwork.org)
+#
+# Created by GeneNetwork Core Team 2010/08/10
+#
+# Last updated by GeneNetwork Core Team 2010/10/20
+
+
+
+import string
+
+from base.templatePage import templatePage
+from base.webqtlTrait import webqtlTrait	
+from AddToSelectionPage import AddToSelectionPage
+
+#########################################
+#      Remove Selection Page
+#########################################
+class RemoveSelectionPage(AddToSelectionPage):
+
+	def __init__(self, fd):
+
+		templatePage.__init__(self, fd)
+
+		if not self.openMysql():
+			return
+
+		if not fd.genotype:
+			fd.readGenotype()
+		
+		self.searchResult = fd.formdata.getvalue('searchResult')
+		if self.searchResult:
+			pass
+		else:
+			templatePage.__init__(self, fd)
+			heading = 'Remove Selections'
+			detail = ['You need to select at least one trait to remove from your selection.']
+			self.error(heading=heading,detail=detail)
+			return
+
+		self.genSelection(fd=fd)
+		self.writeHTML(fd)
+
+
+
+	def genSelection(self, fd=None):
+		collectionName = '%s_Select' % fd.RISet
+
+		try:
+			preSelection = fd.input_session_data[collectionName]
+			preSelection = list(string.split(preSelection,','))
+		except:
+			preSelection = []
+		
+		if type("1") == type(self.searchResult):
+			self.searchResult = [self.searchResult]
+		
+		if preSelection:
+			for item in self.searchResult:
+				try:
+					preSelection.remove(item)
+				except:
+					pass
+		self.searchResult = preSelection[:]
+		
+		if not self.searchResult:
+			self.session_data_changed[collectionName] = ""
+			return
+		
+		#self.searchResult.sort()
+		for item in self.searchResult:
+			if not item:
+				self.searchResult.remove(item)
+				
+		searchResult2 = []
+		self.theseTraits = []
+		for item in self.searchResult:
+			try:
+				thisTrait = webqtlTrait(fullname=item, cursor=self.cursor)
+				thisTrait.retrieveInfo(QTL=1)
+				self.theseTraits.append(thisTrait)
+				searchResult2.append(item)
+			except:
+				pass
+
+		allTraitStr = string.join(searchResult2,',')
+
+		self.session_data_changed[collectionName] = allTraitStr
+