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author | Pjotr Prins | 2020-04-26 13:20:13 -0500 |
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committer | Pjotr Prins | 2020-04-26 13:20:13 -0500 |
commit | c0909b461effecb8051020a4f186a40b8867b574 (patch) | |
tree | 8a910a67072299a48d70ff40e304641f4c1953b4 /README.md | |
parent | cdcfb086de9277a1c1b2d8de57ceb78ae8683f53 (diff) | |
parent | 14d49450c47e8ef3b34bca9e759acd371319a854 (diff) | |
download | genenetwork2-c0909b461effecb8051020a4f186a40b8867b574.tar.gz |
Merge branch 'testing' of github.com:genenetwork/genenetwork2 into testing
Diffstat (limited to 'README.md')
-rw-r--r-- | README.md | 11 |
1 files changed, 5 insertions, 6 deletions
@@ -25,16 +25,15 @@ Once installed GN2 can be run online through a browser interface genenetwork2 ``` -(default is http://localhost:5003/). For full examples (you'll need to -set a number of environment variables), including running scripts and -a Python REPL, for example +(default is http://localhost:5003/). A quick example is ```sh -env GN2_PROFILE=~/opt/gn-latest GENENETWORK_FILES=~/data/gn2_data ./bin/genenetwork2 +env GN2_PROFILE=~/opt/gn-latest SERVER_PORT=5300 GENENETWORK_FILES=~/data/gn2_data/ ./bin/genenetwork2 ./etc/default_settings.py -gunicorn-dev ``` -see the startup script -[./bin/genenetwork2](https://github.com/genenetwork/genenetwork2/blob/testing/bin/genenetwork2). +For full examples (you may need to set a number of environment +variables), including running scripts and a Python REPL, also see the +startup script [./bin/genenetwork2](https://github.com/genenetwork/genenetwork2/blob/testing/bin/genenetwork2). Also Mysql and Elasticsearch need to be running, see [INSTALL](./doc/README.org). |