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genecup: pubmed updater uses genecup guix profile

master
Efraim Flashner 9 months ago
committed by Shepherd
parent
commit
e84380c518
  1. 2
      update_archive-pubmed.sh

2
update_archive-pubmed.sh

@ -1,2 +1,2 @@
#!/bin/sh
/bin/su -l hchen -c 'export EDIRECT_PUBMED_MASTER=/export2/PubMed; export PERL_LWP_SSL_CA_FILE=/etc/ssl/certs/ca-certificates.crt; export NLTK_DATA=/export2/PubMed/nltk_data; unset PATH; $(/var/guix/profiles/per-user/shepherd/current-guix/bin/guix build edirect)/bin/archive-pubmed'
/bin/su -l hchen -c 'export EDIRECT_PUBMED_MASTER=/export2/PubMed; export PERL_LWP_SSL_CA_FILE=/etc/ssl/certs/ca-certificates.crt; export NLTK_DATA=/export2/PubMed/nltk_data; unset PATH; $(/var/guix/profiles/per-user/genecup/current-guix/bin/guix build edirect)/bin/archive-pubmed'

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