genecup: update service.

genecup-channels.scm

@@ -0,0 +1,16 @@
+(list
+  (channel
+    (name 'gn-bioinformatics)
+    (url "http://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics")
+    (commit
+     "90b466488a778cfea3693fb2157c58377849f4a6"))
+  (channel
+    (name 'guix)
+    (url "https://git.savannah.gnu.org/git/guix.git")
+    (commit
+      "2ca982ff41270288913ad6b7d5d9e1cad87b06d9")
+    (introduction
+      (make-channel-introduction
+	"9edb3f66fd807b096b48283debdcddccfea34bad"
+	(openpgp-fingerprint
+	  "BBB0 2DDF 2CEA F6A8 0D1D  E643 A2A0 6DF2 A33A 54FA")))))

run_genecup.sh

@@ -1,6 +1,13 @@
 #!/bin/sh
-cd $(/home/shepherd/guix-profiles/genecup/bin/guix build -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics genecup-with-tensorflow-native)
+
 export EDIRECT_PUBMED_MASTER=/export2/PubMed
 export PERL_LWP_SSL_CA_FILE=/etc/ssl/certs/ca-certificates.crt
 export TMPDIR=/export/ratspub/tmp
-/home/shepherd/guix-profiles/genecup/bin/guix environment -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics --ad-hoc genecup-with-tensorflow-native -- ./server.py
+
+# This version for the genecup guix profile which includes guix-bioinformatics, using genecup-channels.scm.
+/home/shepherd/guix-profiles/genecup/bin/guix environment --no-grafts genecup-with-tensorflow-native -- /home/shepherd/guix-profiles/genecup/bin/guix build --no-grafts genecup-with-tensorflow-native --cores=4
+cd $(/home/shepherd/guix-profiles/genecup/bin/guix build genecup-with-tensorflow-native)
+/home/shepherd/guix-profiles/genecup/bin/guix environment --ad-hoc genecup-with-tensorflow-native -- ./server.py
+
+#cd $(/home/shepherd/guix-profiles/genecup/bin/guix build -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics genecup-with-tensorflow-native)
+#/home/shepherd/guix-profiles/genecup/bin/guix environment -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics --ad-hoc genecup-with-tensorflow-native -- ./server.py