From 324ebc8ddacab8e154047b8518afd5cbb5bb2fa4 Mon Sep 17 00:00:00 2001 From: ziejd2 Date: Thu, 28 Sep 2017 15:28:12 -0500 Subject: Deleting old files --- sourcecodes/data/Eyoban.txt | 1 - sourcecodes/data/Eyocontinuous_input.txt | 202 --- sourcecodes/data/Eyographviz.txt | 12 - sourcecodes/data/Eyographviz_new.txt | 11 - sourcecodes/data/Eyogrviz_name_file.txt | 9 - sourcecodes/data/Eyogrviz_name_file_new.txt | 9 - sourcecodes/data/Eyok.txt | 1 - sourcecodes/data/Eyomap.txt | 8 - sourcecodes/data/Eyomapdata.txt | 1 - sourcecodes/data/Eyoname.txt | 1 - sourcecodes/data/Eyonet_figure.txt | 652 --------- sourcecodes/data/Eyonet_figure_new.txt | 552 -------- sourcecodes/data/Eyonlevels.txt | 2 - sourcecodes/data/Eyonnode.txt | 1 - sourcecodes/data/Eyonrows.txt | 1 - sourcecodes/data/Eyoparent.txt | 1 - sourcecodes/data/Eyostructure_input.txt | 9 - sourcecodes/data/Eyostructure_input_new.txt | 10 - sourcecodes/data/Eyostructure_input_temp.txt | 9 - sourcecodes/data/Eyostructure_old.txt | 7 - sourcecodes/data/Eyothr.txt | 1 - sourcecodes/data/Eyotype.txt | 2 - sourcecodes/data/Eyovar.txt | 1 - sourcecodes/data/Eyovardata.txt | 1 - sourcecodes/data/Eyovarname.txt | 1 - sourcecodes/data/Eyowhite.txt | 1 - sourcecodes/data/Swzban.txt | 51 - sourcecodes/data/Swzcontinuous_input.txt | 76 -- sourcecodes/data/Swzgraphviz.txt | 32 - sourcecodes/data/Swzgraphviz_new.txt | 29 - sourcecodes/data/Swzk.txt | 1 - sourcecodes/data/Swzmap.txt | 14 - sourcecodes/data/Swzmapdata.txt | 1 - sourcecodes/data/Swzname.txt | 1 - sourcecodes/data/Swznet_figure.txt | 1387 -------------------- sourcecodes/data/Swznet_figure_new.txt | 1287 ------------------ sourcecodes/data/Swznlevels.txt | 2 - sourcecodes/data/Swznnode.txt | 1 - sourcecodes/data/Swznrows.txt | 1 - sourcecodes/data/Swzparent.txt | 1 - sourcecodes/data/Swzstructure_input.txt | 15 - sourcecodes/data/Swzstructure_input_new.txt | 16 - sourcecodes/data/Swzstructure_input_temp.txt | 15 - sourcecodes/data/Swzstructure_old.txt | 14 - sourcecodes/data/Swzthr.txt | 1 - sourcecodes/data/Swztier.txt | 1 - sourcecodes/data/Swztype.txt | 2 - sourcecodes/data/Swzvar.txt | 1 - sourcecodes/data/Swzvardata.txt | 1 - sourcecodes/data/Swzvarname.txt | 1 - sourcecodes/data/Swzwhite.txt | 1 - sourcecodes/data/evidencemodified | Bin 452271 -> 0 bytes sourcecodes/data/initialstructure | Bin 452404 -> 0 bytes sourcecodes/data/newintervention | Bin 452401 -> 0 bytes sourcecodes/data/standardized_data.txt | 201 --- sourcecodes/data/temp_evidence_file | 36 - sourcecodes/data/temp_intervention_file | 36 - sourcecodes/data/temp_shell_file_initial_structure | 36 - 58 files changed, 4767 deletions(-) delete mode 100644 sourcecodes/data/Eyoban.txt delete mode 100644 sourcecodes/data/Eyocontinuous_input.txt delete mode 100644 sourcecodes/data/Eyographviz.txt delete mode 100644 sourcecodes/data/Eyographviz_new.txt delete mode 100644 sourcecodes/data/Eyogrviz_name_file.txt delete mode 100644 sourcecodes/data/Eyogrviz_name_file_new.txt delete mode 100644 sourcecodes/data/Eyok.txt delete mode 100644 sourcecodes/data/Eyomap.txt delete mode 100644 sourcecodes/data/Eyomapdata.txt delete mode 100644 sourcecodes/data/Eyoname.txt delete mode 100644 sourcecodes/data/Eyonet_figure.txt delete mode 100644 sourcecodes/data/Eyonet_figure_new.txt delete mode 100644 sourcecodes/data/Eyonlevels.txt delete mode 100644 sourcecodes/data/Eyonnode.txt delete mode 100644 sourcecodes/data/Eyonrows.txt delete mode 100644 sourcecodes/data/Eyoparent.txt delete mode 100644 sourcecodes/data/Eyostructure_input.txt delete mode 100644 sourcecodes/data/Eyostructure_input_new.txt delete mode 100644 sourcecodes/data/Eyostructure_input_temp.txt delete mode 100644 sourcecodes/data/Eyostructure_old.txt delete mode 100644 sourcecodes/data/Eyothr.txt delete mode 100644 sourcecodes/data/Eyotype.txt delete mode 100644 sourcecodes/data/Eyovar.txt delete mode 100644 sourcecodes/data/Eyovardata.txt delete mode 100644 sourcecodes/data/Eyovarname.txt delete mode 100644 sourcecodes/data/Eyowhite.txt delete mode 100644 sourcecodes/data/Swzban.txt delete mode 100644 sourcecodes/data/Swzcontinuous_input.txt delete mode 100644 sourcecodes/data/Swzgraphviz.txt delete mode 100644 sourcecodes/data/Swzgraphviz_new.txt delete mode 100644 sourcecodes/data/Swzk.txt delete mode 100644 sourcecodes/data/Swzmap.txt delete mode 100644 sourcecodes/data/Swzmapdata.txt delete mode 100644 sourcecodes/data/Swzname.txt delete mode 100644 sourcecodes/data/Swznet_figure.txt delete mode 100644 sourcecodes/data/Swznet_figure_new.txt delete mode 100644 sourcecodes/data/Swznlevels.txt delete mode 100644 sourcecodes/data/Swznnode.txt delete mode 100644 sourcecodes/data/Swznrows.txt delete mode 100644 sourcecodes/data/Swzparent.txt delete mode 100644 sourcecodes/data/Swzstructure_input.txt delete mode 100644 sourcecodes/data/Swzstructure_input_new.txt delete mode 100644 sourcecodes/data/Swzstructure_input_temp.txt delete mode 100644 sourcecodes/data/Swzstructure_old.txt delete mode 100644 sourcecodes/data/Swzthr.txt delete mode 100644 sourcecodes/data/Swztier.txt delete mode 100644 sourcecodes/data/Swztype.txt delete mode 100644 sourcecodes/data/Swzvar.txt delete mode 100644 sourcecodes/data/Swzvardata.txt delete mode 100644 sourcecodes/data/Swzvarname.txt delete mode 100644 sourcecodes/data/Swzwhite.txt delete mode 100644 sourcecodes/data/evidencemodified delete mode 100644 sourcecodes/data/initialstructure delete mode 100644 sourcecodes/data/newintervention delete mode 100644 sourcecodes/data/standardized_data.txt delete mode 100644 sourcecodes/data/temp_evidence_file delete mode 100644 sourcecodes/data/temp_intervention_file delete mode 100644 sourcecodes/data/temp_shell_file_initial_structure (limited to 'sourcecodes') diff --git a/sourcecodes/data/Eyoban.txt b/sourcecodes/data/Eyoban.txt deleted file mode 100644 index 83e81b8b..00000000 --- a/sourcecodes/data/Eyoban.txt +++ /dev/null @@ -1 +0,0 @@ -From To diff --git a/sourcecodes/data/Eyocontinuous_input.txt b/sourcecodes/data/Eyocontinuous_input.txt deleted file mode 100644 index 90b5d097..00000000 --- a/sourcecodes/data/Eyocontinuous_input.txt +++ /dev/null @@ -1,202 +0,0 @@ -Geno1 Geno2 Trait1 Trait2 Trait3 Trait4 Trait5 Trait6 -2 2 1 1 1 1 1 1 -1 1 0.46259 1.2692 -1.3164 -0.44096 0.5929 -0.75422 -2 2 -0.10011 -0.88834 1.6407 0.99972 0.31288 0.65602 -2 2 -1.0533 -0.55296 1.2715 1.3686 -0.19153 0.37361 -2 1 0.042371 0.13573 -0.72659 -0.66133 0.43157 -1.6715 -2 1 -0.68686 -1.6152 -0.95019 -1.2239 0.12319 -0.79155 -2 2 -0.4558 0.090877 0.94224 1.2354 -0.36356 0.34937 -2 2 0.237 -0.49002 1.8939 1.4399 0.033059 1.3229 -2 1 0.070265 0.22547 -1.4903 -0.069341 -0.16148 -0.01449 -2 2 -0.69146 -0.43461 1.1501 0.21205 -0.18087 0.32746 -2 2 0.31535 -0.9858 0.57816 0.35924 0.12866 1.0553 -1 2 1.2718 0.39314 0.6669 0.90002 -0.30206 1.3376 -2 2 1.1871 -0.45611 0.87227 0.31014 -0.092846 0.81278 -1 2 -1.0168 -0.44286 1.6933 0.72968 0.038808 0.81906 -1 1 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-0.052581 0.99511 -2 1 0.55023 -0.20403 0.138 -0.70518 0.66927 -0.28861 -1 1 0.57423 1.1886 0.092876 0.025677 -0.41099 -1.2858 -1 1 -0.14179 1.5827 -0.94328 0.7703 -0.43967 -0.50448 -1 1 0.14666 1.0492 -0.0030259 -0.62418 -0.087515 -0.048386 diff --git a/sourcecodes/data/Eyographviz.txt b/sourcecodes/data/Eyographviz.txt deleted file mode 100644 index 343e8cad..00000000 --- a/sourcecodes/data/Eyographviz.txt +++ /dev/null @@ -1,12 +0,0 @@ -digraph G { -size="10,10"; ratio = fill; -node [shape=square,width=1.5]; -0 -> 3; -1 -> 4; -1 -> 5; -1 -> 7; -3 -> 2; -3 -> 5; -4 -> 5; -7 -> 4; -} \ No newline at end of file diff --git a/sourcecodes/data/Eyographviz_new.txt b/sourcecodes/data/Eyographviz_new.txt deleted file mode 100644 index 6428ed29..00000000 --- a/sourcecodes/data/Eyographviz_new.txt +++ /dev/null @@ -1,11 +0,0 @@ -digraph G { -size="10,10"; ratio = fill; -node [shape=square,width=1.5]; -0 -> 3; -1 -> 4; -1 -> 5; -3 -> 2; -3 -> 5; -4 -> 5; -7 -> 4; -} \ No newline at end of file diff --git a/sourcecodes/data/Eyogrviz_name_file.txt b/sourcecodes/data/Eyogrviz_name_file.txt deleted file mode 100644 index 26cc6e02..00000000 --- a/sourcecodes/data/Eyogrviz_name_file.txt +++ /dev/null @@ -1,9 +0,0 @@ -Geno1 -Geno2 -Trait1 -Trait2 -Trait3 -Trait4 -Trait5 -Trait6 - diff --git a/sourcecodes/data/Eyogrviz_name_file_new.txt b/sourcecodes/data/Eyogrviz_name_file_new.txt deleted file mode 100644 index 26cc6e02..00000000 --- a/sourcecodes/data/Eyogrviz_name_file_new.txt +++ /dev/null @@ -1,9 +0,0 @@ -Geno1 -Geno2 -Trait1 -Trait2 -Trait3 -Trait4 -Trait5 -Trait6 - diff --git a/sourcecodes/data/Eyok.txt b/sourcecodes/data/Eyok.txt deleted file mode 100644 index d00491fd..00000000 --- a/sourcecodes/data/Eyok.txt +++ /dev/null @@ -1 +0,0 @@ -1 diff --git a/sourcecodes/data/Eyomap.txt b/sourcecodes/data/Eyomap.txt deleted file mode 100644 index e31c6365..00000000 --- a/sourcecodes/data/Eyomap.txt +++ /dev/null @@ -1,8 +0,0 @@ -Geno1 1 0.473175 1.665000 -Geno2 2 0.496318 1.430000 -Trait1 1 0.667809 -0.023687 -Trait2 1 0.796873 0.038552 -Trait3 2 1.036694 0.068708 -Trait4 1 0.984008 -0.010125 -Trait5 1 0.316471 0.008911 -Trait6 1 0.904542 -0.114267 diff --git a/sourcecodes/data/Eyomapdata.txt b/sourcecodes/data/Eyomapdata.txt deleted file mode 100644 index 42b2fd9c..00000000 --- a/sourcecodes/data/Eyomapdata.txt +++ /dev/null @@ -1 +0,0 @@ -Trait5 Geno2 Trait6 Trait3 Geno1 Trait2 Trait4 Trait1 diff --git a/sourcecodes/data/Eyoname.txt b/sourcecodes/data/Eyoname.txt deleted file mode 100644 index 8f42b468..00000000 --- a/sourcecodes/data/Eyoname.txt +++ /dev/null @@ -1 +0,0 @@ -Geno1 Geno2 Trait1 Trait2 Trait3 Trait4 Trait5 Trait6 diff --git a/sourcecodes/data/Eyonet_figure.txt b/sourcecodes/data/Eyonet_figure.txt deleted file mode 100644 index 87b08c02..00000000 --- a/sourcecodes/data/Eyonet_figure.txt +++ /dev/null @@ -1,652 +0,0 @@ -8 -1200 1200 -Trait5 0 0 -Geno2 300 0 -Trait6 220 240 -Trait3 100 480 -Geno1 600 0 -Trait2 620 240 -Trait4 420 720 -Trait1 500 480 -Trait5 1 -250 150 -0 -0 --3.2055 0.0025 --3.1368 0.0030 --3.0681 0.0038 --2.9994 0.0046 --2.9308 0.0057 --2.8621 0.0069 --2.7934 0.0083 --2.7247 0.0101 --2.6561 0.0121 --2.5874 0.0144 --2.5187 0.0172 --2.4500 0.0203 --2.3813 0.0240 --2.3127 0.0281 --2.2440 0.0328 --2.1753 0.0381 --2.1066 0.0441 --2.0379 0.0508 --1.9693 0.0582 --1.9006 0.0664 --1.8319 0.0754 --1.7632 0.0852 --1.6945 0.0958 --1.6259 0.1073 --1.5572 0.1195 --1.4885 0.1326 --1.4198 0.1463 --1.3511 0.1608 --1.2825 0.1758 --1.2138 0.1914 --1.1451 0.2074 --1.0764 0.2237 --1.0078 0.2401 --0.9391 0.2565 --0.8704 0.2728 --0.8017 0.2888 --0.7330 0.3042 --0.6644 0.3190 --0.5957 0.3330 --0.5270 0.3460 --0.4583 0.3578 --0.3896 0.3682 --0.3210 0.3772 --0.2523 0.3846 --0.1836 0.3904 --0.1149 0.3944 --0.0462 0.3965 -0.0224 0.3969 -0.0911 0.3953 -0.1598 0.3920 -0.2285 0.3868 -0.2971 0.3800 -0.3658 0.3715 -0.4345 0.3615 -0.5032 0.3502 -0.5719 0.3376 -0.6405 0.3240 -0.7092 0.3095 -0.7779 0.2942 -0.8466 0.2784 -0.9153 0.2622 -0.9839 0.2458 -1.0526 0.2294 -1.1213 0.2130 -1.1900 0.1969 -1.2587 0.1812 -1.3273 0.1659 -1.3960 0.1513 -1.4647 0.1373 -1.5334 0.1240 -1.6021 0.1114 -1.6707 0.0997 -1.7394 0.0888 -1.8081 0.0787 -1.8768 0.0694 -1.9454 0.0610 -2.0141 0.0533 -2.0828 0.0464 -2.1515 0.0401 -2.2202 0.0346 -2.2888 0.0297 -2.3575 0.0253 -2.4262 0.0215 -2.4949 0.0182 -2.5636 0.0153 -2.6322 0.0129 -2.7009 0.0107 -2.7696 0.0089 -2.8383 0.0074 -2.9070 0.0061 -2.9756 0.0050 -3.0443 0.0040 -3.1130 0.0033 -3.1817 0.0026 -3.2503 0.0021 -3.3190 0.0017 -3.3877 0.0014 -3.4564 0.0011 -3.5251 0.0008 -3.5937 0.0007 -3.6624 0.0005 -Geno2 2 -250 150 -0 -3 3 4 7 -1 0.5700 -2 0.4300 -Trait6 1 -250 150 -1 2 -1 4 --3.6825 0.0005 --3.6140 0.0006 --3.5455 0.0008 --3.4769 0.0010 --3.4084 0.0013 --3.3399 0.0016 --3.2713 0.0020 --3.2028 0.0025 --3.1343 0.0031 --3.0658 0.0038 --2.9972 0.0046 --2.9287 0.0057 --2.8602 0.0069 --2.7917 0.0084 --2.7231 0.0101 --2.6546 0.0121 --2.5861 0.0145 --2.5176 0.0172 --2.4490 0.0204 --2.3805 0.0240 --2.3120 0.0282 --2.2435 0.0329 --2.1749 0.0382 --2.1064 0.0441 --2.0379 0.0508 --1.9694 0.0582 --1.9008 0.0664 --1.8323 0.0753 --1.7638 0.0851 --1.6953 0.0957 --1.6267 0.1071 --1.5582 0.1193 --1.4897 0.1323 --1.4212 0.1461 --1.3526 0.1605 --1.2841 0.1755 --1.2156 0.1910 --1.1471 0.2069 --1.0785 0.2232 --1.0100 0.2396 --0.9415 0.2560 --0.8730 0.2722 --0.8044 0.2881 --0.7359 0.3036 --0.6674 0.3184 --0.5989 0.3324 --0.5303 0.3454 --0.4618 0.3572 --0.3933 0.3677 --0.3248 0.3768 --0.2562 0.3843 --0.1877 0.3901 --0.1192 0.3942 --0.0507 0.3965 -0.0179 0.3969 -0.0864 0.3955 -0.1549 0.3923 -0.2234 0.3873 -0.2920 0.3806 -0.3605 0.3722 -0.4290 0.3624 -0.4975 0.3512 -0.5661 0.3387 -0.6346 0.3252 -0.7031 0.3108 -0.7716 0.2956 -0.8402 0.2799 -0.9087 0.2638 -0.9772 0.2474 -1.0457 0.2310 -1.1143 0.2147 -1.1828 0.1986 -1.2513 0.1829 -1.3198 0.1676 -1.3884 0.1529 -1.4569 0.1388 -1.5254 0.1255 -1.5939 0.1129 -1.6625 0.1011 -1.7310 0.0901 -1.7995 0.0799 -1.8680 0.0706 -1.9366 0.0620 -2.0051 0.0542 -2.0736 0.0472 -2.1421 0.0409 -2.2107 0.0353 -2.2792 0.0303 -2.3477 0.0259 -2.4162 0.0221 -2.4848 0.0187 -2.5533 0.0157 -2.6218 0.0132 -2.6903 0.0110 -2.7589 0.0092 -2.8274 0.0076 -2.8959 0.0062 -2.9644 0.0051 -3.0330 0.0042 -3.1015 0.0034 -3.1700 0.0027 -Trait3 1 -250 150 -2 2 3 -1 7 --2.7825 0.0086 --2.7216 0.0101 --2.6608 0.0119 --2.5999 0.0140 --2.5390 0.0163 --2.4782 0.0190 --2.4173 0.0220 --2.3565 0.0254 --2.2956 0.0292 --2.2347 0.0335 --2.1739 0.0383 --2.1130 0.0435 --2.0521 0.0494 --1.9913 0.0558 --1.9304 0.0628 --1.8695 0.0704 --1.8087 0.0786 --1.7478 0.0875 --1.6870 0.0970 --1.6261 0.1072 --1.5652 0.1181 --1.5044 0.1295 --1.4435 0.1415 --1.3826 0.1541 --1.3218 0.1672 --1.2609 0.1807 --1.2000 0.1946 --1.1392 0.2088 --1.0783 0.2232 --1.0175 0.2378 --0.9566 0.2524 --0.8957 0.2668 --0.8349 0.2811 --0.7740 0.2951 --0.7131 0.3086 --0.6523 0.3216 --0.5914 0.3338 --0.5305 0.3453 --0.4697 0.3559 --0.4088 0.3654 --0.3480 0.3738 --0.2871 0.3811 --0.2262 0.3870 --0.1654 0.3916 --0.1045 0.3948 --0.0436 0.3966 -0.0172 0.3969 -0.0781 0.3957 -0.1389 0.3932 -0.1998 0.3892 -0.2607 0.3838 -0.3215 0.3771 -0.3824 0.3692 -0.4433 0.3601 -0.5041 0.3500 -0.5650 0.3389 -0.6259 0.3270 -0.6867 0.3143 -0.7476 0.3010 -0.8084 0.2872 -0.8693 0.2731 -0.9302 0.2587 -0.9910 0.2441 -1.0519 0.2295 -1.1128 0.2150 -1.1736 0.2007 -1.2345 0.1867 -1.2954 0.1730 -1.3562 0.1597 -1.4171 0.1469 -1.4779 0.1346 -1.5388 0.1229 -1.5997 0.1119 -1.6605 0.1014 -1.7214 0.0916 -1.7823 0.0824 -1.8431 0.0739 -1.9040 0.0660 -1.9649 0.0587 -2.0257 0.0521 -2.0866 0.0460 -2.1474 0.0405 -2.2083 0.0355 -2.2692 0.0310 -2.3300 0.0270 -2.3909 0.0234 -2.4518 0.0203 -2.5126 0.0174 -2.5735 0.0150 -2.6344 0.0128 -2.6952 0.0109 -2.7561 0.0092 -2.8169 0.0078 -2.8778 0.0066 -2.9387 0.0055 -2.9995 0.0046 -3.0604 0.0038 -3.1213 0.0032 -3.1821 0.0026 -3.2430 0.0022 -3.3039 0.0018 -Geno1 2 -250 150 -0 -1 6 -1 0.3350 -2 0.6650 -Trait2 1 -250 150 -1 5 -2 7 8 --3.0753 0.0037 --3.0078 0.0045 --2.9403 0.0055 --2.8728 0.0067 --2.8053 0.0081 --2.7378 0.0097 --2.6702 0.0116 --2.6027 0.0139 --2.5352 0.0165 --2.4677 0.0195 --2.4002 0.0229 --2.3327 0.0268 --2.2652 0.0313 --2.1977 0.0363 --2.1302 0.0420 --2.0627 0.0483 --1.9951 0.0553 --1.9276 0.0631 --1.8601 0.0716 --1.7926 0.0809 --1.7251 0.0910 --1.6576 0.1019 --1.5901 0.1135 --1.5226 0.1260 --1.4551 0.1392 --1.3876 0.1530 --1.3201 0.1675 --1.2525 0.1826 --1.1850 0.1981 --1.1175 0.2139 --1.0500 0.2300 --0.9825 0.2462 --0.9150 0.2623 --0.8475 0.2782 --0.7800 0.2937 --0.7125 0.3088 --0.6450 0.3231 --0.5775 0.3366 --0.5099 0.3490 --0.4424 0.3603 --0.3749 0.3703 --0.3074 0.3788 --0.2399 0.3858 --0.1724 0.3912 --0.1049 0.3948 --0.0374 0.3967 -0.0301 0.3968 -0.0976 0.3951 -0.1652 0.3916 -0.2327 0.3865 -0.3002 0.3796 -0.3677 0.3713 -0.4352 0.3614 -0.5027 0.3503 -0.5702 0.3379 -0.6377 0.3246 -0.7052 0.3103 -0.7727 0.2954 -0.8402 0.2799 -0.9078 0.2640 -0.9753 0.2479 -1.0428 0.2317 -1.1103 0.2156 -1.1778 0.1998 -1.2453 0.1842 -1.3128 0.1691 -1.3803 0.1546 -1.4478 0.1406 -1.5153 0.1274 -1.5829 0.1148 -1.6504 0.1031 -1.7179 0.0921 -1.7854 0.0819 -1.8529 0.0725 -1.9204 0.0640 -1.9879 0.0561 -2.0554 0.0490 -2.1229 0.0426 -2.1904 0.0369 -2.2579 0.0318 -2.3255 0.0273 -2.3930 0.0233 -2.4605 0.0198 -2.5280 0.0168 -2.5955 0.0141 -2.6630 0.0119 -2.7305 0.0099 -2.7980 0.0082 -2.8655 0.0068 -2.9330 0.0056 -3.0005 0.0046 -3.0681 0.0038 -3.1356 0.0031 -3.2031 0.0025 -3.2706 0.0020 -3.3381 0.0016 -3.4056 0.0013 -3.4731 0.0010 -3.5406 0.0008 -3.6081 0.0006 -3.6756 0.0005 -Trait4 1 -250 150 -3 2 4 6 -0 --3.2636 0.0025 --3.1926 0.0031 --3.1216 0.0039 --3.0506 0.0048 --2.9796 0.0059 --2.9086 0.0071 --2.8376 0.0086 --2.7666 0.0104 --2.6957 0.0125 --2.6247 0.0150 --2.5537 0.0178 --2.4827 0.0211 --2.4117 0.0248 --2.3407 0.0291 --2.2697 0.0340 --2.1987 0.0395 --2.1277 0.0456 --2.0567 0.0525 --1.9857 0.0601 --1.9148 0.0685 --1.8438 0.0777 --1.7728 0.0877 --1.7018 0.0986 --1.6308 0.1102 --1.5598 0.1226 --1.4888 0.1358 --1.4178 0.1497 --1.3468 0.1643 --1.2758 0.1794 --1.2049 0.1949 --1.1339 0.2108 --1.0629 0.2270 --0.9919 0.2432 --0.9209 0.2593 --0.8499 0.2751 --0.7789 0.2906 --0.7079 0.3055 --0.6369 0.3196 --0.5659 0.3328 --0.4949 0.3448 --0.4240 0.3557 --0.3530 0.3651 --0.2820 0.3730 --0.2110 0.3792 --0.1400 0.3838 --0.0690 0.3865 -0.0020 0.3874 -0.0730 0.3865 -0.1440 0.3838 -0.2150 0.3792 -0.2859 0.3730 -0.3569 0.3651 -0.4279 0.3557 -0.4989 0.3448 -0.5699 0.3328 -0.6409 0.3196 -0.7119 0.3055 -0.7829 0.2906 -0.8539 0.2752 -0.9249 0.2593 -0.9959 0.2432 -1.0668 0.2270 -1.1378 0.2109 -1.2088 0.1950 -1.2798 0.1794 -1.3508 0.1643 -1.4218 0.1498 -1.4928 0.1359 -1.5638 0.1227 -1.6348 0.1102 -1.7058 0.0986 -1.7767 0.0877 -1.8477 0.0777 -1.9187 0.0685 -1.9897 0.0601 -2.0607 0.0525 -2.1317 0.0456 -2.2027 0.0395 -2.2737 0.0340 -2.3447 0.0291 -2.4157 0.0248 -2.4867 0.0211 -2.5576 0.0178 -2.6286 0.0150 -2.6996 0.0125 -2.7706 0.0104 -2.8416 0.0086 -2.9126 0.0071 -2.9836 0.0059 -3.0546 0.0048 -3.1256 0.0039 -3.1966 0.0031 -3.2675 0.0025 -3.3385 0.0020 -3.4095 0.0016 -3.4805 0.0013 -3.5515 0.0010 -3.6225 0.0008 -3.6935 0.0006 -3.7645 0.0005 -3.8355 0.0004 -Trait1 1 -250 150 -1 6 -0 --3.6887 0.0005 --3.6108 0.0006 --3.5329 0.0008 --3.4550 0.0011 --3.3772 0.0014 --3.2993 0.0018 --3.2214 0.0024 --3.1436 0.0030 --3.0657 0.0038 --2.9878 0.0048 --2.9099 0.0060 --2.8321 0.0075 --2.7542 0.0093 --2.6763 0.0115 --2.5984 0.0141 --2.5206 0.0172 --2.4427 0.0208 --2.3648 0.0250 --2.2870 0.0299 --2.2091 0.0356 --2.1312 0.0420 --2.0533 0.0494 --1.9755 0.0577 --1.8976 0.0669 --1.8197 0.0772 --1.7418 0.0886 --1.6640 0.1010 --1.5861 0.1144 --1.5082 0.1289 --1.4303 0.1443 --1.3525 0.1606 --1.2746 0.1777 --1.1967 0.1954 --1.1189 0.2136 --1.0410 0.2322 --0.9631 0.2508 --0.8852 0.2693 --0.8074 0.2874 --0.7295 0.3049 --0.6516 0.3215 --0.5737 0.3371 --0.4959 0.3512 --0.4180 0.3638 --0.3401 0.3746 --0.2623 0.3833 --0.1844 0.3900 --0.1065 0.3944 --0.0286 0.3964 -0.0492 0.3961 -0.1271 0.3934 -0.2050 0.3884 -0.2829 0.3812 -0.3607 0.3719 -0.4386 0.3606 -0.5165 0.3476 -0.5943 0.3331 -0.6722 0.3172 -0.7501 0.3003 -0.8280 0.2826 -0.9058 0.2644 -0.9837 0.2459 -1.0616 0.2272 -1.1395 0.2088 -1.2173 0.1907 -1.2952 0.1731 -1.3731 0.1562 -1.4509 0.1401 -1.5288 0.1250 -1.6067 0.1108 -1.6846 0.0976 -1.7624 0.0855 -1.8403 0.0744 -1.9182 0.0644 -1.9961 0.0554 -2.0739 0.0473 -2.1518 0.0402 -2.2297 0.0340 -2.3075 0.0286 -2.3854 0.0238 -2.4633 0.0198 -2.5412 0.0163 -2.6190 0.0134 -2.6969 0.0109 -2.7748 0.0088 -2.8527 0.0071 -2.9305 0.0057 -3.0084 0.0045 -3.0863 0.0036 -3.1641 0.0028 -3.2420 0.0022 -3.3199 0.0017 -3.3978 0.0013 -3.4756 0.0010 -3.5535 0.0008 -3.6314 0.0006 -3.7093 0.0004 -3.7871 0.0003 -3.8650 0.0002 -3.9429 0.0002 -4.0207 0.0001 -4.0986 0.0001 diff --git a/sourcecodes/data/Eyonet_figure_new.txt b/sourcecodes/data/Eyonet_figure_new.txt deleted file mode 100644 index b0cb2df5..00000000 --- a/sourcecodes/data/Eyonet_figure_new.txt +++ /dev/null @@ -1,552 +0,0 @@ -3 5 -8 -1200 1200 -Trait5 0 0 -Geno2 300 0 -Trait6 220 240 -Trait3 100 480 -Geno1 600 0 -Trait2 620 240 -Trait4 420 720 -Trait1 500 480 -Trait5 1 -250 150 -0 -0 --3.2055 0.0025 --3.1368 0.0030 --3.0681 0.0038 --2.9994 0.0046 --2.9308 0.0057 --2.8621 0.0069 --2.7934 0.0083 --2.7247 0.0101 --2.6561 0.0121 --2.5874 0.0144 --2.5187 0.0172 --2.4500 0.0203 --2.3813 0.0240 --2.3127 0.0281 --2.2440 0.0328 --2.1753 0.0381 --2.1066 0.0441 --2.0379 0.0508 --1.9693 0.0582 --1.9006 0.0664 --1.8319 0.0754 --1.7632 0.0852 --1.6945 0.0958 --1.6259 0.1073 --1.5572 0.1195 --1.4885 0.1326 --1.4198 0.1463 --1.3511 0.1608 --1.2825 0.1758 --1.2138 0.1914 --1.1451 0.2074 --1.0764 0.2237 --1.0078 0.2401 --0.9391 0.2565 --0.8704 0.2728 --0.8017 0.2888 --0.7330 0.3042 --0.6644 0.3190 --0.5957 0.3330 --0.5270 0.3460 --0.4583 0.3578 --0.3896 0.3682 --0.3210 0.3772 --0.2523 0.3846 --0.1836 0.3904 --0.1149 0.3944 --0.0462 0.3965 -0.0224 0.3969 -0.0911 0.3953 -0.1598 0.3920 -0.2285 0.3868 -0.2971 0.3800 -0.3658 0.3715 -0.4345 0.3615 -0.5032 0.3502 -0.5719 0.3376 -0.6405 0.3240 -0.7092 0.3095 -0.7779 0.2942 -0.8466 0.2784 -0.9153 0.2622 -0.9839 0.2458 -1.0526 0.2294 -1.1213 0.2130 -1.1900 0.1969 -1.2587 0.1812 -1.3273 0.1659 -1.3960 0.1513 -1.4647 0.1373 -1.5334 0.1240 -1.6021 0.1114 -1.6707 0.0997 -1.7394 0.0888 -1.8081 0.0787 -1.8768 0.0694 -1.9454 0.0610 -2.0141 0.0533 -2.0828 0.0464 -2.1515 0.0401 -2.2202 0.0346 -2.2888 0.0297 -2.3575 0.0253 -2.4262 0.0215 -2.4949 0.0182 -2.5636 0.0153 -2.6322 0.0129 -2.7009 0.0107 -2.7696 0.0089 -2.8383 0.0074 -2.9070 0.0061 -2.9756 0.0050 -3.0443 0.0040 -3.1130 0.0033 -3.1817 0.0026 -3.2503 0.0021 -3.3190 0.0017 -3.3877 0.0014 -3.4564 0.0011 -3.5251 0.0008 -3.5937 0.0007 -3.6624 0.0005 -Geno2 2 -250 150 -0 -3 3 4 7 -1 0.0094 -2 0.9906 -Trait6 1 -250 150 -1 2 -1 4 -1.3424 1.0000 -Trait3 1 -250 150 -2 2 3 -1 7 --2.7825 0.0000 --2.7216 0.0000 --2.6608 0.0000 --2.5999 0.0000 --2.5390 0.0000 --2.4782 0.0000 --2.4173 0.0000 --2.3565 0.0000 --2.2956 0.0000 --2.2347 0.0000 --2.1739 0.0000 --2.1130 0.0000 --2.0521 0.0000 --1.9913 0.0000 --1.9304 0.0000 --1.8695 0.0000 --1.8087 0.0000 --1.7478 0.0000 --1.6870 0.0000 --1.6261 0.0000 --1.5652 0.0000 --1.5044 0.0000 --1.4435 0.0000 --1.3826 0.0000 --1.3218 0.0000 --1.2609 0.0000 --1.2000 0.0000 --1.1392 0.0000 --1.0783 0.0000 --1.0175 0.0000 --0.9566 0.0000 --0.8957 0.0000 --0.8349 0.0000 --0.7740 0.0000 --0.7131 0.0000 --0.6523 0.0000 --0.5914 0.0000 --0.5305 0.0000 --0.4697 0.0000 --0.4088 0.0000 --0.3480 0.0000 --0.2871 0.0000 --0.2262 0.0000 --0.1654 0.0001 --0.1045 0.0003 --0.0436 0.0008 -0.0172 0.0019 -0.0781 0.0042 -0.1389 0.0089 -0.1998 0.0178 -0.2607 0.0338 -0.3215 0.0610 -0.3824 0.1048 -0.4433 0.1712 -0.5041 0.2660 -0.5650 0.3928 -0.6259 0.5516 -0.6867 0.7366 -0.7476 0.9353 -0.8084 1.1292 -0.8693 1.2964 -0.9302 1.4152 -0.9910 1.4690 -1.0519 1.4500 -1.1128 1.3608 -1.1736 1.2144 -1.2345 1.0306 -1.2954 0.8316 -1.3562 0.6380 -1.4171 0.4655 -1.4779 0.3229 -1.5388 0.2130 -1.5997 0.1336 -1.6605 0.0797 -1.7214 0.0452 -1.7823 0.0244 -1.8431 0.0125 -1.9040 0.0061 -1.9649 0.0028 -2.0257 0.0012 -2.0866 0.0005 -2.1474 0.0002 -2.2083 0.0001 -2.2692 0.0000 -2.3300 0.0000 -2.3909 0.0000 -2.4518 0.0000 -2.5126 0.0000 -2.5735 0.0000 -2.6344 0.0000 -2.6952 0.0000 -2.7561 0.0000 -2.8169 0.0000 -2.8778 0.0000 -2.9387 0.0000 -2.9995 0.0000 -3.0604 0.0000 -3.1213 0.0000 -3.1821 0.0000 -3.2430 0.0000 -3.3039 0.0000 -Geno1 2 -250 150 -0 -1 6 -1.0000 1.0000 -Trait2 1 -250 150 -1 5 -2 7 8 --3.0753 0.0000 --3.0078 0.0000 --2.9403 0.0000 --2.8728 0.0000 --2.8053 0.0000 --2.7378 0.0000 --2.6702 0.0000 --2.6027 0.0000 --2.5352 0.0000 --2.4677 0.0000 --2.4002 0.0000 --2.3327 0.0001 --2.2652 0.0001 --2.1977 0.0001 --2.1302 0.0002 --2.0627 0.0002 --1.9951 0.0003 --1.9276 0.0005 --1.8601 0.0006 --1.7926 0.0009 --1.7251 0.0012 --1.6576 0.0016 --1.5901 0.0021 --1.5226 0.0028 --1.4551 0.0037 --1.3876 0.0049 --1.3201 0.0064 --1.2525 0.0082 --1.1850 0.0106 --1.1175 0.0134 --1.0500 0.0170 --0.9825 0.0212 --0.9150 0.0264 --0.8475 0.0325 --0.7800 0.0398 --0.7125 0.0483 --0.6450 0.0583 --0.5775 0.0697 --0.5099 0.0827 --0.4424 0.0974 --0.3749 0.1139 --0.3074 0.1321 --0.2399 0.1520 --0.1724 0.1737 --0.1049 0.1969 --0.0374 0.2215 -0.0301 0.2473 -0.0976 0.2739 -0.1652 0.3012 -0.2327 0.3286 -0.3002 0.3558 -0.3677 0.3823 -0.4352 0.4076 -0.5027 0.4313 -0.5702 0.4529 -0.6377 0.4719 -0.7052 0.4880 -0.7727 0.5008 -0.8402 0.5100 -0.9078 0.5155 -0.9753 0.5170 -1.0428 0.5145 -1.1103 0.5082 -1.1778 0.4981 -1.2453 0.4845 -1.3128 0.4677 -1.3803 0.4480 -1.4478 0.4259 -1.5153 0.4018 -1.5829 0.3761 -1.6504 0.3494 -1.7179 0.3222 -1.7854 0.2948 -1.8529 0.2676 -1.9204 0.2411 -1.9879 0.2156 -2.0554 0.1913 -2.1229 0.1685 -2.1904 0.1472 -2.2579 0.1277 -2.3255 0.1099 -2.3930 0.0938 -2.4605 0.0795 -2.5280 0.0669 -2.5955 0.0558 -2.6630 0.0462 -2.7305 0.0380 -2.7980 0.0310 -2.8655 0.0251 -2.9330 0.0202 -3.0005 0.0161 -3.0681 0.0127 -3.1356 0.0100 -3.2031 0.0078 -3.2706 0.0060 -3.3381 0.0046 -3.4056 0.0035 -3.4731 0.0027 -3.5406 0.0020 -3.6081 0.0015 -3.6756 0.0011 -Trait4 1 -250 150 -3 2 4 6 -0 --3.2636 0.0000 --3.1926 0.0000 --3.1216 0.0000 --3.0506 0.0000 --2.9796 0.0000 --2.9086 0.0000 --2.8376 0.0000 --2.7666 0.0000 --2.6957 0.0000 --2.6247 0.0000 --2.5537 0.0000 --2.4827 0.0000 --2.4117 0.0000 --2.3407 0.0000 --2.2697 0.0000 --2.1987 0.0000 --2.1277 0.0000 --2.0567 0.0000 --1.9857 0.0000 --1.9148 0.0000 --1.8438 0.0000 --1.7728 0.0000 --1.7018 0.0000 --1.6308 0.0000 --1.5598 0.0000 --1.4888 0.0000 --1.4178 0.0000 --1.3468 0.0000 --1.2758 0.0000 --1.2049 0.0000 --1.1339 0.0000 --1.0629 0.0000 --0.9919 0.0000 --0.9209 0.0000 --0.8499 0.0000 --0.7789 0.0000 --0.7079 0.0000 --0.6369 0.0000 --0.5659 0.0000 --0.4949 0.0000 --0.4240 0.0001 --0.3530 0.0002 --0.2820 0.0004 --0.2110 0.0009 --0.1400 0.0019 --0.0690 0.0037 -0.0020 0.0070 -0.0730 0.0129 -0.1440 0.0227 -0.2150 0.0386 -0.2859 0.0630 -0.3569 0.0990 -0.4279 0.1497 -0.4989 0.2176 -0.5699 0.3043 -0.6409 0.4094 -0.7119 0.5299 -0.7829 0.6599 -0.8539 0.7905 -0.9249 0.9110 -0.9959 1.0099 -1.0668 1.0772 -1.1378 1.1052 -1.2088 1.0909 -1.2798 1.0359 -1.3508 0.9463 -1.4218 0.8317 -1.4928 0.7031 -1.5638 0.5719 -1.6348 0.4475 -1.7058 0.3368 -1.7767 0.2439 -1.8477 0.1699 -1.9187 0.1139 -1.9897 0.0734 -2.0607 0.0455 -2.1317 0.0272 -2.2027 0.0156 -2.2737 0.0086 -2.3447 0.0046 -2.4157 0.0023 -2.4867 0.0011 -2.5576 0.0005 -2.6286 0.0002 -2.6996 0.0001 -2.7706 0.0000 -2.8416 0.0000 -2.9126 0.0000 -2.9836 0.0000 -3.0546 0.0000 -3.1256 0.0000 -3.1966 0.0000 -3.2675 0.0000 -3.3385 0.0000 -3.4095 0.0000 -3.4805 0.0000 -3.5515 0.0000 -3.6225 0.0000 -3.6935 0.0000 -3.7645 0.0000 -3.8355 0.0000 -Trait1 1 -250 150 -1 6 -0 --3.6887 0.0001 --3.6108 0.0002 --3.5329 0.0002 --3.4550 0.0003 --3.3772 0.0004 --3.2993 0.0005 --3.2214 0.0007 --3.1436 0.0009 --3.0657 0.0012 --2.9878 0.0016 --2.9099 0.0020 --2.8321 0.0026 --2.7542 0.0034 --2.6763 0.0043 --2.5984 0.0054 --2.5206 0.0068 --2.4427 0.0085 --2.3648 0.0106 --2.2870 0.0131 --2.2091 0.0161 --2.1312 0.0196 --2.0533 0.0237 --1.9755 0.0285 --1.8976 0.0341 --1.8197 0.0406 --1.7418 0.0479 --1.6640 0.0562 --1.5861 0.0656 --1.5082 0.0761 --1.4303 0.0876 --1.3525 0.1003 --1.2746 0.1141 --1.1967 0.1291 --1.1189 0.1450 --1.0410 0.1619 --0.9631 0.1796 --0.8852 0.1981 --0.8074 0.2171 --0.7295 0.2364 --0.6516 0.2558 --0.5737 0.2751 --0.4959 0.2940 --0.4180 0.3123 --0.3401 0.3296 --0.2623 0.3457 --0.1844 0.3603 --0.1065 0.3732 --0.0286 0.3842 -0.0492 0.3930 -0.1271 0.3995 -0.2050 0.4036 -0.2829 0.4052 -0.3607 0.4042 -0.4386 0.4008 -0.5165 0.3949 -0.5943 0.3866 -0.6722 0.3762 -0.7501 0.3637 -0.8280 0.3495 -0.9058 0.3338 -0.9837 0.3167 -1.0616 0.2987 -1.1395 0.2799 -1.2173 0.2607 -1.2952 0.2413 -1.3731 0.2219 -1.4509 0.2028 -1.5288 0.1842 -1.6067 0.1663 -1.6846 0.1492 -1.7624 0.1330 -1.8403 0.1178 -1.9182 0.1037 -1.9961 0.0907 -2.0739 0.0789 -2.1518 0.0681 -2.2297 0.0585 -2.3075 0.0499 -2.3854 0.0423 -2.4633 0.0357 -2.5412 0.0299 -2.6190 0.0248 -2.6969 0.0205 -2.7748 0.0169 -2.8527 0.0138 -2.9305 0.0112 -3.0084 0.0090 -3.0863 0.0072 -3.1641 0.0058 -3.2420 0.0046 -3.3199 0.0036 -3.3978 0.0028 -3.4756 0.0022 -3.5535 0.0017 -3.6314 0.0013 -3.7093 0.0010 -3.7871 0.0007 -3.8650 0.0006 -3.9429 0.0004 -4.0207 0.0003 -4.0986 0.0002 diff --git a/sourcecodes/data/Eyonlevels.txt b/sourcecodes/data/Eyonlevels.txt deleted file mode 100644 index c8ca46d0..00000000 --- a/sourcecodes/data/Eyonlevels.txt +++ /dev/null @@ -1,2 +0,0 @@ -Geno1 2 1 -Geno2 2 1 diff --git a/sourcecodes/data/Eyonnode.txt b/sourcecodes/data/Eyonnode.txt deleted file mode 100644 index 45a4fb75..00000000 --- a/sourcecodes/data/Eyonnode.txt +++ /dev/null @@ -1 +0,0 @@ -8 diff --git a/sourcecodes/data/Eyonrows.txt b/sourcecodes/data/Eyonrows.txt deleted file mode 100644 index 08839f6b..00000000 --- a/sourcecodes/data/Eyonrows.txt +++ /dev/null @@ -1 +0,0 @@ -200 diff --git a/sourcecodes/data/Eyoparent.txt b/sourcecodes/data/Eyoparent.txt deleted file mode 100644 index b8626c4c..00000000 --- a/sourcecodes/data/Eyoparent.txt +++ /dev/null @@ -1 +0,0 @@ -4 diff --git a/sourcecodes/data/Eyostructure_input.txt b/sourcecodes/data/Eyostructure_input.txt deleted file mode 100644 index 09955440..00000000 --- a/sourcecodes/data/Eyostructure_input.txt +++ /dev/null @@ -1,9 +0,0 @@ -Geno1 Geno2 Trait1 Trait2 Trait3 Trait4 Trait5 Trait6 -0 0 0 1 0 0 0 0 -0 0 0 0 1 1 0 1 -0 0 0 0 0 0 0 0 -0 0 1 0 0 1 0 0 -0 0 0 0 0 1 0 0 -0 0 0 0 0 0 0 0 -0 0 0 0 0 0 0 0 -0 0 0 0 1 0 0 0 diff --git a/sourcecodes/data/Eyostructure_input_new.txt b/sourcecodes/data/Eyostructure_input_new.txt deleted file mode 100644 index 8c029bcd..00000000 --- a/sourcecodes/data/Eyostructure_input_new.txt +++ /dev/null @@ -1,10 +0,0 @@ -Geno1 Geno2 Trait1 Trait2 Trait3 Trait4 Trait5 Trait6 -0 0 0 1 0 0 0 0 0 -0 0 0 0 1 1 0 0 0 -0 0 0 0 0 0 0 0 0 -0 0 1 0 0 1 0 0 0 -0 0 0 0 0 1 0 0 0 -0 0 0 0 0 0 0 0 0 -0 0 0 0 0 0 0 0 0 -0 0 0 0 1 0 0 0 0 -0 0 0 0 0 0 0 0 0 diff --git a/sourcecodes/data/Eyostructure_input_temp.txt b/sourcecodes/data/Eyostructure_input_temp.txt deleted file mode 100644 index fc815603..00000000 --- a/sourcecodes/data/Eyostructure_input_temp.txt +++ /dev/null @@ -1,9 +0,0 @@ -Geno1 Geno2 Trait1 Trait2 Trait3 Trait4 Trait5 Trait6 -0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 -0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 1.000000 -0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 -0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 -0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 -0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 diff --git a/sourcecodes/data/Eyostructure_old.txt b/sourcecodes/data/Eyostructure_old.txt deleted file mode 100644 index 2cbd496f..00000000 --- a/sourcecodes/data/Eyostructure_old.txt +++ /dev/null @@ -1,7 +0,0 @@ -Geno1 0.3350 0.6650 -Trait2 0.0037 0.0045 0.0055 0.0067 0.0081 0.0097 0.0116 0.0139 0.0165 0.0195 0.0229 0.0268 0.0313 0.0363 0.0420 0.0483 0.0553 0.0631 0.0716 0.0809 0.0910 0.1019 0.1135 0.1260 0.1392 0.1530 0.1675 0.1826 0.1981 0.2139 0.2300 0.2462 0.2623 0.2782 0.2937 0.3088 0.3231 0.3366 0.3490 0.3603 0.3703 0.3788 0.3858 0.3912 0.3948 0.3967 0.3968 0.3951 0.3916 0.3865 0.3796 0.3713 0.3614 0.3503 0.3379 0.3246 0.3103 0.2954 0.2799 0.2640 0.2479 0.2317 0.2156 0.1998 0.1842 0.1691 0.1546 0.1406 0.1274 0.1148 0.1031 0.0921 0.0819 0.0725 0.0640 0.0561 0.0490 0.0426 0.0369 0.0318 0.0273 0.0233 0.0198 0.0168 0.0141 0.0119 0.0099 0.0082 0.0068 0.0056 0.0046 0.0038 0.0031 0.0025 0.0020 0.0016 0.0013 0.0010 0.0008 0.0006 0.0005 -Geno2 0.5700 0.4300 -Trait3 0.0086 0.0101 0.0119 0.0140 0.0163 0.0190 0.0220 0.0254 0.0292 0.0335 0.0383 0.0435 0.0494 0.0558 0.0628 0.0704 0.0786 0.0875 0.0970 0.1072 0.1181 0.1295 0.1415 0.1541 0.1672 0.1807 0.1946 0.2088 0.2232 0.2378 0.2524 0.2668 0.2811 0.2951 0.3086 0.3216 0.3338 0.3453 0.3559 0.3654 0.3738 0.3811 0.3870 0.3916 0.3948 0.3966 0.3969 0.3957 0.3932 0.3892 0.3838 0.3771 0.3692 0.3601 0.3500 0.3389 0.3270 0.3143 0.3010 0.2872 0.2731 0.2587 0.2441 0.2295 0.2150 0.2007 0.1867 0.1730 0.1597 0.1469 0.1346 0.1229 0.1119 0.1014 0.0916 0.0824 0.0739 0.0660 0.0587 0.0521 0.0460 0.0405 0.0355 0.0310 0.0270 0.0234 0.0203 0.0174 0.0150 0.0128 0.0109 0.0092 0.0078 0.0066 0.0055 0.0046 0.0038 0.0032 0.0026 0.0022 0.0018 -Trait4 0.0025 0.0031 0.0039 0.0048 0.0059 0.0071 0.0086 0.0104 0.0125 0.0150 0.0178 0.0211 0.0248 0.0291 0.0340 0.0395 0.0456 0.0525 0.0601 0.0685 0.0777 0.0877 0.0986 0.1102 0.1226 0.1358 0.1497 0.1643 0.1794 0.1949 0.2108 0.2270 0.2432 0.2593 0.2751 0.2906 0.3055 0.3196 0.3328 0.3448 0.3557 0.3651 0.3730 0.3792 0.3838 0.3865 0.3874 0.3865 0.3838 0.3792 0.3730 0.3651 0.3557 0.3448 0.3328 0.3196 0.3055 0.2906 0.2752 0.2593 0.2432 0.2270 0.2109 0.1950 0.1794 0.1643 0.1498 0.1359 0.1227 0.1102 0.0986 0.0877 0.0777 0.0685 0.0601 0.0525 0.0456 0.0395 0.0340 0.0291 0.0248 0.0211 0.0178 0.0150 0.0125 0.0104 0.0086 0.0071 0.0059 0.0048 0.0039 0.0031 0.0025 0.0020 0.0016 0.0013 0.0010 0.0008 0.0006 0.0005 0.0004 -Trait6 0.0005 0.0006 0.0008 0.0010 0.0013 0.0016 0.0020 0.0025 0.0031 0.0038 0.0046 0.0057 0.0069 0.0084 0.0101 0.0121 0.0145 0.0172 0.0204 0.0240 0.0282 0.0329 0.0382 0.0441 0.0508 0.0582 0.0664 0.0753 0.0851 0.0957 0.1071 0.1193 0.1323 0.1461 0.1605 0.1755 0.1910 0.2069 0.2232 0.2396 0.2560 0.2722 0.2881 0.3036 0.3184 0.3324 0.3454 0.3572 0.3677 0.3768 0.3843 0.3901 0.3942 0.3965 0.3969 0.3955 0.3923 0.3873 0.3806 0.3722 0.3624 0.3512 0.3387 0.3252 0.3108 0.2956 0.2799 0.2638 0.2474 0.2310 0.2147 0.1986 0.1829 0.1676 0.1529 0.1388 0.1255 0.1129 0.1011 0.0901 0.0799 0.0706 0.0620 0.0542 0.0472 0.0409 0.0353 0.0303 0.0259 0.0221 0.0187 0.0157 0.0132 0.0110 0.0092 0.0076 0.0062 0.0051 0.0042 0.0034 0.0027 -Trait1 0.0005 0.0006 0.0008 0.0011 0.0014 0.0018 0.0024 0.0030 0.0038 0.0048 0.0060 0.0075 0.0093 0.0115 0.0141 0.0172 0.0208 0.0250 0.0299 0.0356 0.0420 0.0494 0.0577 0.0669 0.0772 0.0886 0.1010 0.1144 0.1289 0.1443 0.1606 0.1777 0.1954 0.2136 0.2322 0.2508 0.2693 0.2874 0.3049 0.3215 0.3371 0.3512 0.3638 0.3746 0.3833 0.3900 0.3944 0.3964 0.3961 0.3934 0.3884 0.3812 0.3719 0.3606 0.3476 0.3331 0.3172 0.3003 0.2826 0.2644 0.2459 0.2272 0.2088 0.1907 0.1731 0.1562 0.1401 0.1250 0.1108 0.0976 0.0855 0.0744 0.0644 0.0554 0.0473 0.0402 0.0340 0.0286 0.0238 0.0198 0.0163 0.0134 0.0109 0.0088 0.0071 0.0057 0.0045 0.0036 0.0028 0.0022 0.0017 0.0013 0.0010 0.0008 0.0006 0.0004 0.0003 0.0002 0.0002 0.0001 0.0001 diff --git a/sourcecodes/data/Eyothr.txt b/sourcecodes/data/Eyothr.txt deleted file mode 100644 index 2eb3c4fe..00000000 --- a/sourcecodes/data/Eyothr.txt +++ /dev/null @@ -1 +0,0 @@ -0.5 diff --git a/sourcecodes/data/Eyotype.txt b/sourcecodes/data/Eyotype.txt deleted file mode 100644 index 285a68af..00000000 --- a/sourcecodes/data/Eyotype.txt +++ /dev/null @@ -1,2 +0,0 @@ -Geno1 Geno2 Trait1 Trait2 Trait3 Trait4 Trait5 Trait6 -2 2 1 1 1 1 1 1 diff --git a/sourcecodes/data/Eyovar.txt b/sourcecodes/data/Eyovar.txt deleted file mode 100644 index 69628e91..00000000 --- a/sourcecodes/data/Eyovar.txt +++ /dev/null @@ -1 +0,0 @@ -3 5 \ No newline at end of file diff --git a/sourcecodes/data/Eyovardata.txt b/sourcecodes/data/Eyovardata.txt deleted file mode 100644 index 5e92a5e9..00000000 --- a/sourcecodes/data/Eyovardata.txt +++ /dev/null @@ -1 +0,0 @@ -1.3424108554384 1 \ No newline at end of file diff --git a/sourcecodes/data/Eyovarname.txt b/sourcecodes/data/Eyovarname.txt deleted file mode 100644 index 2b473922..00000000 --- a/sourcecodes/data/Eyovarname.txt +++ /dev/null @@ -1 +0,0 @@ -Trait6 Geno1 \ No newline at end of file diff --git a/sourcecodes/data/Eyowhite.txt b/sourcecodes/data/Eyowhite.txt deleted file mode 100644 index 83e81b8b..00000000 --- a/sourcecodes/data/Eyowhite.txt +++ /dev/null @@ -1 +0,0 @@ -From To diff --git a/sourcecodes/data/Swzban.txt b/sourcecodes/data/Swzban.txt deleted file mode 100644 index fdd12dda..00000000 --- a/sourcecodes/data/Swzban.txt +++ /dev/null @@ -1,51 +0,0 @@ -From To -Ifih1 rs3664317 -Oas1a rs3664317 -Parp9 rs3664317 -Dhx58 rs3664317 -Cd1d1 rs3664317 -Irf7 rs3664317 -Oas3 rs3664317 -Pml rs3664317 -Mx1 rs3664317 -Ifit1 rs3664317 -Trim25 rs3664317 -Oas1g rs3664317 -Pglyrp3 rs3664317 -Ifih1 rs3664317 -Oas1a Ifih1 -Parp9 Ifih1 -Dhx58 Ifih1 -Cd1d1 Ifih1 -Irf7 Ifih1 -Oas3 Ifih1 -Pml Ifih1 -Mx1 Ifih1 -Ifit1 Ifih1 -Trim25 Ifih1 -Oas1g Ifih1 -Pglyrp3 Ifih1 -Oas1a rs3664317 -Parp9 rs3664317 -Dhx58 rs3664317 -Cd1d1 rs3664317 -Irf7 rs3664317 -Oas3 rs3664317 -Pml rs3664317 -Mx1 rs3664317 -Ifit1 rs3664317 -Trim25 rs3664317 -Oas1g rs3664317 -Pglyrp3 rs3664317 -Oas1a Ifih1 -Parp9 Ifih1 -Dhx58 Ifih1 -Cd1d1 Ifih1 -Irf7 Ifih1 -Oas3 Ifih1 -Pml Ifih1 -Mx1 Ifih1 -Ifit1 Ifih1 -Trim25 Ifih1 -Oas1g Ifih1 -Pglyrp3 Ifih1 diff --git a/sourcecodes/data/Swzcontinuous_input.txt b/sourcecodes/data/Swzcontinuous_input.txt deleted file mode 100644 index ca8ea1e5..00000000 --- a/sourcecodes/data/Swzcontinuous_input.txt +++ /dev/null @@ -1,76 +0,0 @@ -rs3664317 Oas1a Parp9 Dhx58 Cd1d1 Irf7 Oas3 Pml Mx1 Ifit1 Trim25 Oas1g Pglyrp3 Ifih1 -2 1 1 1 1 1 1 1 1 1 1 1 1 1 -1 8.34 9.812 8.774 9.79 9.663 8.27 11.036 7.284 8.286 10.395 8.521 6.186 8.83 -1 8.368 9.738 8.566 9.144 9.484 8.818 11.03 6.977 8.294 10.076 8.529 5.968 8.828 -1 8.178 9.57 8.726 9.575 10.106 8.99 10.878 7.205 8.676 10.036 8.61 5.976 9.024 -1 8.116 9.901 8.904 9.959 9.793 8.336 11.105 7.598 8.316 10.292 8.401 5.814 8.836 -2 8.099 9.68 8.876 10.116 9.771 8.379 11.028 7.438 8.541 10.215 8.32 5.917 9.073 -1 8.262 9.59 8.24 10.088 8.938 7.832 10.486 6.752 7.825 9.908 8.196 6.15 8.446 -1 7.915 9.415 8.308 9.707 9.12 8.702 11.102 7.208 8.243 10.034 7.897 6.06 8.892 -2 8.565 10.002 8.96 9.779 10.322 9.24 11.278 7.644 8.893 10.42 8.773 5.914 9.407 -1 8.189 9.774 8.541 9.939 9.134 7.819 10.766 7.122 8.352 10.113 8.492 6.269 9.055 -1 8.476 9.954 8.908 9.476 9.92 8.764 11.134 7.859 8.788 10.17 8.862 6.226 9.17 -2 8.119 9.946 8.876 9.578 10.02 8.734 11.244 7.85 8.838 10.557 8.56 5.98 9.353 -2 8.305 9.713 8.972 9.789 9.839 8.804 10.948 7.682 8.896 10.181 8.854 5.979 9.567 -2 8.654 10 9.306 9.439 10.457 9.223 10.922 7.082 8.942 10.131 9.162 6.01 9.74 -1 8.105 9.748 8.725 10.119 9.782 8.575 11.113 7.63 8.674 10.355 8.59 6.279 8.908 -1 8.247 9.715 8.829 9.646 9.953 9.668 11.112 7.384 9.221 10.19 8.64 6 9.552 -1 8.511 9.994 9.014 9.89 10.266 8.444 10.599 7.331 9.153 10.012 8.837 6.148 9.023 -2 8.947 10.28 9.483 9.398 11.23 9.86 11.324 8.006 9.772 10.524 9.587 5.865 10.067 -1 8.526 9.685 8.921 9.7 10.126 9.373 11.121 7.497 9.003 10.357 8.156 6.334 9.678 -2 8.06 9.745 9.092 9.278 10.231 8.976 10.998 7.578 9.145 10.283 8.611 6.168 9.413 -2 7.93 9.728 8.694 9.512 9.826 9.016 11.276 7.604 8.767 10.378 8.577 5.963 9.264 -2 8.511 9.686 9.014 8.982 10.508 10.108 11.304 7.441 9.133 10.341 9.04 6.2 9.974 -2 8.645 9.997 8.97 9.443 10.393 9.302 11.409 7.785 8.894 10.552 9.051 5.997 9.412 -2 8.293 9.802 9.001 9.524 10.156 9.263 11.212 7.772 8.581 10.433 8.514 6.093 9.177 -1 7.781 9.712 8.97 9.375 10.12 9.484 11.317 7.347 8.972 10.393 8.352 6.193 9.587 -2 8.465 9.88 8.913 9.816 9.965 8.852 11.138 7.537 8.625 10.426 8.617 6.044 9.556 -2 8.657 10.026 9.189 9.691 10.302 9.268 11.194 7.634 9.143 10.378 9.05 6.067 9.679 -2 7.634 9.606 8.36 9.465 8.41 8.605 11.183 6.942 8.174 9.952 7.478 6.09 9.535 -1 7.669 9.494 8.779 9.552 9.362 8.52 11.024 7.131 8.378 10.391 8.114 6.07 8.851 -2 8.618 10.212 9.433 9.672 10.442 9.21 11.328 8.045 9.322 10.5 9.128 5.994 9.656 -2 8.731 10.27 9.342 9.43 10.697 10.117 11.286 7.749 9.734 10.464 9.322 6.156 9.876 -1 7.554 9.524 8.759 9.93 9.52 8.279 10.82 7.32 8.316 10.31 8.186 6.068 9.046 -1 8.262 9.677 8.75 9.444 10.052 8.634 10.888 7.32 8.562 9.893 8.644 6.212 8.918 -1 7.823 9.628 8.66 9.529 9.578 8.736 11.206 7.171 8.408 10.062 8.111 5.838 9.033 -1 8.28 9.572 8.784 9.428 9.862 9.424 11.27 7.288 8.505 10.174 8.642 6.022 9.313 -2 9.09 10.053 9.599 9.469 11.004 9.882 11.436 8.521 9.814 10.562 9.704 6.044 10.061 -1 8.446 9.989 9.297 9.688 10.577 9.129 11.102 7.718 9.484 10.231 9.072 6.17 9.21 -1 8.668 9.858 9.195 9.385 10.695 9.249 11.028 7.765 9.367 10.319 9.179 6.136 9.563 -2 8.574 10.059 9.281 9.233 10.508 9.247 11.145 8.138 9.505 10.402 9.192 5.992 9.848 -2 8.523 10.052 9.131 9.507 10.418 9.413 11.187 7.641 9.304 10.465 9.063 6.095 9.733 -1 7.987 9.748 8.766 9.578 9.781 8.482 11.279 7.52 8.364 10.141 8.207 6.192 9.133 -2 8.466 9.429 8.946 9.395 9.715 9.071 11.388 7.592 8.078 10.32 8.326 6.108 9.021 -1 7.668 9.694 8.493 10.112 9.561 8.394 10.922 7.26 8.19 10.27 7.916 5.892 8.974 -2 8.379 10.037 9.155 9.683 10.281 9.2 10.913 7.173 9.404 10.381 9.097 6.099 9.714 -2 7.805 9.654 8.454 9.198 10.065 9.468 11.217 6.917 8.43 10.459 8.11 6.068 9.068 -1 7.981 9.8 8.553 9.946 9.862 8.901 11.085 7.214 8.393 10.373 8.19 6.05 9.015 -1 7.746 9.688 8.578 9.901 9.358 7.866 10.928 7.354 7.929 10.233 8.066 5.754 8.883 -1 7.997 9.859 8.795 9.867 9.817 8.734 11.109 7.416 8.67 10.247 8.176 6.143 9.081 -1 8.674 9.689 9.06 9.81 10.544 8.995 11.189 7.781 9.219 10.07 8.98 5.992 9.143 -1 8.088 9.49 8.676 9.456 10.184 8.737 10.998 7.222 8.538 10.192 8.441 6.147 8.55 -1 8.001 9.801 8.669 9.977 9.383 8.274 11.055 7.231 7.913 10.272 8.277 5.931 9.009 -2 8.218 9.458 8.781 9.214 9.66 8.87 10.738 7.241 8.289 10.029 8.612 6.125 9.38 -1 7.684 9.56 8.75 10.077 9.686 8.27 11.102 7.206 8.13 10.212 8.07 6.018 8.984 -2 8.326 9.696 8.88 9.714 10.014 9.08 11.055 7.256 8.494 10.054 8.63 6.177 9.162 -2 8.906 10.106 9.412 9.704 11.06 9.854 11.335 7.799 10.103 10.471 9.25 6.033 9.97 -1 8.073 9.793 8.626 9.879 9.262 8.408 10.844 7.108 8.368 9.959 8.261 6.052 8.916 -2 8.527 10.026 9.143 9.244 10.597 9.566 11.108 7.778 9.748 10.351 9.153 6.055 9.698 -2 8.614 10.05 9.202 9.508 10.66 9.63 11.156 7.758 9.789 10.324 9.068 6.15 9.948 -2 8.522 10.158 8.992 9.684 9.992 8.55 11.125 7.914 8.976 10.311 8.574 5.889 9.566 -1 8.086 9.6 8.522 9.544 9.641 8.514 10.99 7.386 8.506 10.194 8.234 6.02 8.736 -1 7.873 9.596 8.452 9.422 9.278 8.509 10.958 7.057 8.081 9.981 7.969 6.136 8.958 -2 8.371 9.99 8.949 9.931 10.195 8.935 10.83 7.694 9.183 10.493 9.124 6.128 9.396 -2 8.476 9.982 9.115 9.639 10.465 9.833 11.105 8.058 9.9 10.351 9.182 6.05 9.884 -1 8.512 9.995 8.846 9.951 9.561 8.558 10.769 7.584 8.901 10.139 8.769 5.959 9.203 -1 8.358 9.858 8.99 9.981 10.123 9.368 10.989 7.463 9.327 9.93 8.54 6.02 9.543 -1 8.23 9.614 8.806 9.919 9.939 9.108 11.184 7.766 8.793 10.174 8.605 5.972 9.068 -2 8.238 9.802 8.926 9.595 10.062 8.77 11.202 7.712 9.131 10.34 8.57 6.05 9.464 -1 8.533 10.108 9.083 10.214 10.514 8.463 11.008 7.356 9.344 10.196 8.736 6.262 9.257 -1 7.866 9.444 8.223 9.865 8.95 8.539 10.935 6.754 7.748 10.177 7.826 6.29 8.716 -2 8.888 10.031 9.158 9.407 10.8 9.547 11.238 7.659 9.602 10.398 9.337 6.028 9.529 -1 8.026 9.682 8.398 9.824 9.202 8.041 10.703 7.322 8.352 10.209 8.196 6.009 9.001 -2 8.974 10.071 9.451 9.348 11.061 9.686 11.255 8.077 10.101 10.323 9.557 6.006 10.072 -1 8.181 9.432 9.045 9.544 10.651 9.18 10.832 7.419 8.742 9.818 8.546 6.33 9.201 -1 8.137 9.676 9.024 9.37 10.206 9.944 10.985 7.226 8.9 10.362 8.918 6.352 9.367 - diff --git a/sourcecodes/data/Swzgraphviz.txt b/sourcecodes/data/Swzgraphviz.txt deleted file mode 100644 index 824e26d5..00000000 --- a/sourcecodes/data/Swzgraphviz.txt +++ /dev/null @@ -1,32 +0,0 @@ -digraph G { -size="10,10"; ratio = fill; -node [shape=square,width=1.5]; -rs3664317 -> Dhx58; -rs3664317 -> Cd1d1; -rs3664317 -> Ifit1; -rs3664317 -> Oas1g; -rs3664317 -> Ifih1; -Parp9 -> Oas1a; -Dhx58 -> Irf7; -Dhx58 -> Mx1; -Dhx58 -> Ifit1; -Dhx58 -> Trim25; -Dhx58 -> Oas1g; -Cd1d1 -> Oas3; -Cd1d1 -> Trim25; -Cd1d1 -> Pglyrp3; -Oas3 -> Pglyrp3; -Pml -> Oas3; -Pml -> Pglyrp3; -Ifit1 -> Irf7; -Ifit1 -> Mx1; -Trim25 -> Parp9; -Trim25 -> Pml; -Trim25 -> Pglyrp3; -Ifih1 -> Parp9; -Ifih1 -> Dhx58; -Ifih1 -> Cd1d1; -Ifih1 -> Oas3; -Ifih1 -> Ifit1; -Ifih1 -> Trim25; -} \ No newline at end of file diff --git a/sourcecodes/data/Swzgraphviz_new.txt b/sourcecodes/data/Swzgraphviz_new.txt deleted file mode 100644 index b6938a23..00000000 --- a/sourcecodes/data/Swzgraphviz_new.txt +++ /dev/null @@ -1,29 +0,0 @@ -digraph G { -size="10,10"; ratio = fill; -node [shape=square,width=1.5]; -rs3664317 -> Dhx58; -rs3664317 -> Cd1d1; -rs3664317 -> Ifit1; -rs3664317 -> Oas1g; -rs3664317 -> Ifih1; -Parp9 -> Oas1a; -Dhx58 -> Irf7; -Dhx58 -> Mx1; -Dhx58 -> Ifit1; -Dhx58 -> Oas1g; -Cd1d1 -> Oas3; -Cd1d1 -> Pglyrp3; -Oas3 -> Pglyrp3; -Pml -> Oas3; -Pml -> Pglyrp3; -Ifit1 -> Irf7; -Ifit1 -> Mx1; -Trim25 -> Parp9; -Trim25 -> Pml; -Trim25 -> Pglyrp3; -Ifih1 -> Parp9; -Ifih1 -> Dhx58; -Ifih1 -> Cd1d1; -Ifih1 -> Oas3; -Ifih1 -> Ifit1; -} \ No newline at end of file diff --git a/sourcecodes/data/Swzk.txt b/sourcecodes/data/Swzk.txt deleted file mode 100644 index 29d6383b..00000000 --- a/sourcecodes/data/Swzk.txt +++ /dev/null @@ -1 +0,0 @@ -100 diff --git a/sourcecodes/data/Swzmap.txt b/sourcecodes/data/Swzmap.txt deleted file mode 100644 index 325f9a8d..00000000 --- a/sourcecodes/data/Swzmap.txt +++ /dev/null @@ -1,14 +0,0 @@ -rs3664317 2 0.501140 1.452055 -Oas1a 1 0.347301 8.281466 -Parp9 1 0.216211 9.804164 -Dhx58 1 0.302026 8.891247 -Cd1d1 1 0.268738 9.643644 -Irf7 1 0.548579 10.009315 -Oas3 1 0.548788 8.957397 -Pml 1 0.190985 11.075425 -Mx1 1 0.336795 7.483137 -Ifit1 1 0.569192 8.828521 -Trim25 1 0.176657 10.255192 -Oas1g 1 0.458134 8.632151 -Pglyrp3 1 0.123345 6.070877 -Ifih1 1 0.387383 9.298137 diff --git a/sourcecodes/data/Swzmapdata.txt b/sourcecodes/data/Swzmapdata.txt deleted file mode 100644 index 64d3fc62..00000000 --- a/sourcecodes/data/Swzmapdata.txt +++ /dev/null @@ -1 +0,0 @@ -rs3664317 Ifih1 Cd1d1 Dhx58 Oas1g Trim25 Pml Oas3 Pglyrp3 Parp9 Oas1a Ifit1 Mx1 Irf7 diff --git a/sourcecodes/data/Swzname.txt b/sourcecodes/data/Swzname.txt deleted file mode 100644 index 1cc6fe19..00000000 --- a/sourcecodes/data/Swzname.txt +++ /dev/null @@ -1 +0,0 @@ -rs3664317 Oas1a Parp9 Dhx58 Cd1d1 Irf7 Oas3 Pml Mx1 Ifit1 Trim25 Oas1g Pglyrp3 Ifih1 diff --git a/sourcecodes/data/Swznet_figure.txt b/sourcecodes/data/Swznet_figure.txt deleted file mode 100644 index 79f052a0..00000000 --- a/sourcecodes/data/Swznet_figure.txt +++ /dev/null @@ -1,1387 +0,0 @@ -14 -1200 1400 -rs3664317 360 0 -Ifih1 480 175 -Cd1d1 160 350 -Dhx58 560 350 -Oas1g 180 525 -Trim25 480 525 -Pml 0 700 -Oas3 280 875 -Pglyrp3 360 1050 -Parp9 240 700 -Oas1a 680 875 -Ifit1 780 525 -Mx1 480 700 -Irf7 720 700 -rs3664317 2 -250 150 -0 -5 2 3 4 5 12 -1 0.5479 -2 0.4521 -Ifih1 1 -250 150 -1 1 -6 3 4 6 8 10 12 --3.1997 0.0023 --3.1378 0.0028 --3.0758 0.0034 --3.0138 0.0041 --2.9518 0.0050 --2.8899 0.0060 --2.8279 0.0071 --2.7659 0.0085 --2.7039 0.0101 --2.6420 0.0119 --2.5800 0.0140 --2.5180 0.0164 --2.4560 0.0192 --2.3941 0.0223 --2.3321 0.0259 --2.2701 0.0299 --2.2081 0.0343 --2.1462 0.0393 --2.0842 0.0449 --2.0222 0.0510 --1.9602 0.0578 --1.8983 0.0652 --1.8363 0.0733 --1.7743 0.0820 --1.7124 0.0914 --1.6504 0.1015 --1.5884 0.1124 --1.5264 0.1238 --1.4645 0.1359 --1.4025 0.1487 --1.3405 0.1620 --1.2785 0.1758 --1.2166 0.1900 --1.1546 0.2046 --1.0926 0.2195 --1.0306 0.2345 --0.9687 0.2496 --0.9067 0.2647 --0.8447 0.2795 --0.7827 0.2941 --0.7208 0.3082 --0.6588 0.3218 --0.5968 0.3347 --0.5348 0.3467 --0.4729 0.3578 --0.4109 0.3678 --0.3489 0.3766 --0.2870 0.3842 --0.2250 0.3903 --0.1630 0.3951 --0.1010 0.3984 --0.0391 0.4001 -0.0229 0.4003 -0.0849 0.3990 -0.1469 0.3961 -0.2088 0.3917 -0.2708 0.3859 -0.3328 0.3787 -0.3948 0.3702 -0.4567 0.3605 -0.5187 0.3497 -0.5807 0.3379 -0.6427 0.3252 -0.7046 0.3118 -0.7666 0.2978 -0.8286 0.2834 -0.8906 0.2685 -0.9525 0.2535 -1.0145 0.2384 -1.0765 0.2234 -1.1385 0.2084 -1.2004 0.1938 -1.2624 0.1794 -1.3244 0.1655 -1.3863 0.1521 -1.4483 0.1392 -1.5103 0.1269 -1.5723 0.1153 -1.6342 0.1043 -1.6962 0.0940 -1.7582 0.0844 -1.8202 0.0755 -1.8821 0.0672 -1.9441 0.0597 -2.0061 0.0527 -2.0681 0.0464 -2.1300 0.0407 -2.1920 0.0356 -2.2540 0.0310 -2.3160 0.0269 -2.3779 0.0232 -2.4399 0.0200 -2.5019 0.0171 -2.5639 0.0146 -2.6258 0.0124 -2.6878 0.0105 -2.7498 0.0089 -2.8117 0.0075 -2.8737 0.0063 -2.9357 0.0052 -2.9977 0.0043 -Cd1d1 1 -250 150 -2 1 2 -3 6 8 9 --3.4620 0.0010 --3.3962 0.0012 --3.3304 0.0015 --3.2645 0.0019 --3.1987 0.0023 --3.1328 0.0029 --3.0670 0.0035 --3.0011 0.0043 --2.9353 0.0052 --2.8694 0.0064 --2.8036 0.0077 --2.7378 0.0092 --2.6719 0.0110 --2.6061 0.0131 --2.5402 0.0156 --2.4744 0.0184 --2.4085 0.0216 --2.3427 0.0253 --2.2768 0.0295 --2.2110 0.0342 --2.1452 0.0395 --2.0793 0.0455 --2.0135 0.0521 --1.9476 0.0594 --1.8818 0.0674 --1.8159 0.0762 --1.7501 0.0857 --1.6843 0.0960 --1.6184 0.1072 --1.5526 0.1190 --1.4867 0.1316 --1.4209 0.1449 --1.3550 0.1589 --1.2892 0.1734 --1.2233 0.1885 --1.1575 0.2039 --1.0917 0.2197 --1.0258 0.2357 --0.9600 0.2517 --0.8941 0.2677 --0.8283 0.2834 --0.7624 0.2987 --0.6966 0.3135 --0.6308 0.3276 --0.5649 0.3408 --0.4991 0.3530 --0.4332 0.3641 --0.3674 0.3739 --0.3015 0.3823 --0.2357 0.3891 --0.1698 0.3944 --0.1040 0.3980 --0.0382 0.3999 -0.0277 0.4000 -0.0935 0.3984 -0.1594 0.3951 -0.2252 0.3901 -0.2911 0.3835 -0.3569 0.3753 -0.4227 0.3658 -0.4886 0.3549 -0.5544 0.3428 -0.6203 0.3297 -0.6861 0.3158 -0.7520 0.3011 -0.8178 0.2858 -0.8837 0.2702 -0.9495 0.2543 -1.0153 0.2382 -1.0812 0.2223 -1.1470 0.2064 -1.2129 0.1909 -1.2787 0.1758 -1.3446 0.1612 -1.4104 0.1471 -1.4763 0.1337 -1.5421 0.1210 -1.6079 0.1090 -1.6738 0.0978 -1.7396 0.0873 -1.8055 0.0776 -1.8713 0.0687 -1.9372 0.0606 -2.0030 0.0532 -2.0688 0.0465 -2.1347 0.0404 -2.2005 0.0350 -2.2664 0.0302 -2.3322 0.0259 -2.3981 0.0222 -2.4639 0.0189 -2.5298 0.0160 -2.5956 0.0135 -2.6614 0.0113 -2.7273 0.0095 -2.7931 0.0079 -2.8590 0.0066 -2.9248 0.0054 -2.9907 0.0044 -3.0565 0.0036 -3.1223 0.0030 -Dhx58 1 -250 150 -2 1 2 -5 5 6 12 13 14 --3.2125 0.0024 --3.1470 0.0029 --3.0814 0.0035 --3.0159 0.0043 --2.9503 0.0053 --2.8848 0.0064 --2.8192 0.0076 --2.7536 0.0092 --2.6881 0.0110 --2.6225 0.0130 --2.5570 0.0154 --2.4914 0.0182 --2.4258 0.0213 --2.3603 0.0249 --2.2947 0.0290 --2.2292 0.0336 --2.1636 0.0388 --2.0980 0.0446 --2.0325 0.0510 --1.9669 0.0581 --1.9014 0.0659 --1.8358 0.0745 --1.7702 0.0838 --1.7047 0.0938 --1.6391 0.1046 --1.5736 0.1162 --1.5080 0.1284 --1.4425 0.1414 --1.3769 0.1550 --1.3113 0.1692 --1.2458 0.1839 --1.1802 0.1990 --1.1147 0.2145 --1.0491 0.2302 --0.9835 0.2459 --0.9180 0.2617 --0.8524 0.2772 --0.7869 0.2924 --0.7213 0.3071 --0.6557 0.3212 --0.5902 0.3346 --0.5246 0.3469 --0.4591 0.3582 --0.3935 0.3683 --0.3280 0.3771 --0.2624 0.3844 --0.1968 0.3902 --0.1313 0.3944 --0.0657 0.3970 --0.0002 0.3978 -0.0654 0.3970 -0.1310 0.3944 -0.1965 0.3902 -0.2621 0.3845 -0.3276 0.3771 -0.3932 0.3684 -0.4588 0.3583 -0.5243 0.3470 -0.5899 0.3346 -0.6554 0.3213 -0.7210 0.3072 -0.7866 0.2925 -0.8521 0.2773 -0.9177 0.2617 -0.9832 0.2460 -1.0488 0.2302 -1.1143 0.2146 -1.1799 0.1991 -1.2455 0.1840 -1.3110 0.1693 -1.3766 0.1551 -1.4421 0.1415 -1.5077 0.1285 -1.5733 0.1162 -1.6388 0.1047 -1.7044 0.0939 -1.7699 0.0838 -1.8355 0.0745 -1.9011 0.0660 -1.9666 0.0582 -2.0322 0.0510 -2.0977 0.0446 -2.1633 0.0388 -2.2288 0.0337 -2.2944 0.0290 -2.3600 0.0250 -2.4255 0.0213 -2.4911 0.0182 -2.5566 0.0154 -2.6222 0.0130 -2.6878 0.0110 -2.7533 0.0092 -2.8189 0.0077 -2.8844 0.0064 -2.9500 0.0053 -3.0156 0.0043 -3.0811 0.0035 -3.1467 0.0029 -3.2122 0.0024 -3.2778 0.0019 -3.3434 0.0015 -Oas1g 1 -250 150 -2 1 4 -0 --3.5192 0.0009 --3.4507 0.0011 --3.3821 0.0014 --3.3135 0.0018 --3.2449 0.0022 --3.1763 0.0028 --3.1077 0.0034 --3.0391 0.0042 --2.9705 0.0052 --2.9019 0.0063 --2.8334 0.0076 --2.7648 0.0092 --2.6962 0.0111 --2.6276 0.0133 --2.5590 0.0158 --2.4904 0.0187 --2.4218 0.0221 --2.3532 0.0260 --2.2847 0.0304 --2.2161 0.0353 --2.1475 0.0409 --2.0789 0.0472 --2.0103 0.0542 --1.9417 0.0619 --1.8731 0.0704 --1.8045 0.0797 --1.7359 0.0899 --1.6674 0.1008 --1.5988 0.1125 --1.5302 0.1251 --1.4616 0.1383 --1.3930 0.1523 --1.3244 0.1670 --1.2558 0.1822 --1.1872 0.1978 --1.1186 0.2138 --1.0501 0.2300 --0.9815 0.2464 --0.9129 0.2626 --0.8443 0.2787 --0.7757 0.2943 --0.7071 0.3094 --0.6385 0.3238 --0.5699 0.3373 --0.5014 0.3497 --0.4328 0.3609 --0.3642 0.3707 --0.2956 0.3791 --0.2270 0.3858 --0.1584 0.3909 --0.0898 0.3942 --0.0212 0.3956 -0.0474 0.3953 -0.1159 0.3931 -0.1845 0.3891 -0.2531 0.3834 -0.3217 0.3761 -0.3903 0.3672 -0.4589 0.3568 -0.5275 0.3451 -0.5961 0.3323 -0.6646 0.3184 -0.7332 0.3038 -0.8018 0.2884 -0.8704 0.2726 -0.9390 0.2565 -1.0076 0.2401 -1.0762 0.2238 -1.1448 0.2077 -1.2134 0.1918 -1.2819 0.1763 -1.3505 0.1613 -1.4191 0.1469 -1.4877 0.1332 -1.5563 0.1202 -1.6249 0.1080 -1.6935 0.0965 -1.7621 0.0859 -1.8307 0.0761 -1.8992 0.0671 -1.9678 0.0589 -2.0364 0.0514 -2.1050 0.0447 -2.1736 0.0387 -2.2422 0.0334 -2.3108 0.0286 -2.3794 0.0244 -2.4479 0.0208 -2.5165 0.0176 -2.5851 0.0148 -2.6537 0.0124 -2.7223 0.0103 -2.7909 0.0086 -2.8595 0.0071 -2.9281 0.0058 -2.9967 0.0048 -3.0652 0.0039 -3.1338 0.0032 -3.2024 0.0025 -3.2710 0.0020 -3.3396 0.0016 -Trim25 1 -250 150 -3 2 3 4 -3 7 9 10 --3.4748 0.0009 --3.4127 0.0012 --3.3506 0.0014 --3.2885 0.0018 --3.2263 0.0022 --3.1642 0.0026 --3.1021 0.0032 --3.0400 0.0039 --2.9779 0.0047 --2.9158 0.0056 --2.8536 0.0068 --2.7915 0.0081 --2.7294 0.0096 --2.6673 0.0113 --2.6052 0.0133 --2.5431 0.0156 --2.4810 0.0183 --2.4188 0.0213 --2.3567 0.0247 --2.2946 0.0286 --2.2325 0.0329 --2.1704 0.0377 --2.1083 0.0431 --2.0461 0.0490 --1.9840 0.0556 --1.9219 0.0628 --1.8598 0.0706 --1.7977 0.0791 --1.7356 0.0883 --1.6735 0.0982 --1.6113 0.1087 --1.5492 0.1200 --1.4871 0.1319 --1.4250 0.1444 --1.3629 0.1575 --1.3008 0.1711 --1.2386 0.1851 --1.1765 0.1996 --1.1144 0.2144 --1.0523 0.2293 --0.9902 0.2444 --0.9281 0.2594 --0.8660 0.2743 --0.8038 0.2889 --0.7417 0.3031 --0.6796 0.3168 --0.6175 0.3299 --0.5554 0.3422 --0.4933 0.3535 --0.4311 0.3638 --0.3690 0.3730 --0.3069 0.3809 --0.2448 0.3875 --0.1827 0.3927 --0.1206 0.3964 --0.0585 0.3987 -0.0037 0.3993 -0.0658 0.3985 -0.1279 0.3961 -0.1900 0.3922 -0.2521 0.3868 -0.3142 0.3801 -0.3764 0.3720 -0.4385 0.3627 -0.5006 0.3522 -0.5627 0.3408 -0.6248 0.3284 -0.6869 0.3153 -0.7490 0.3015 -0.8112 0.2872 -0.8733 0.2725 -0.9354 0.2576 -0.9975 0.2426 -1.0596 0.2275 -1.1217 0.2126 -1.1839 0.1979 -1.2460 0.1835 -1.3081 0.1695 -1.3702 0.1559 -1.4323 0.1429 -1.4944 0.1304 -1.5565 0.1186 -1.6187 0.1075 -1.6808 0.0970 -1.7429 0.0872 -1.8050 0.0781 -1.8671 0.0696 -1.9292 0.0619 -1.9914 0.0548 -2.0535 0.0483 -2.1156 0.0424 -2.1777 0.0371 -2.2398 0.0323 -2.3019 0.0281 -2.3640 0.0243 -2.4262 0.0209 -2.4883 0.0180 -2.5504 0.0153 -2.6125 0.0131 -2.6746 0.0111 -2.7367 0.0094 -Pml 1 -250 150 -1 6 -2 8 9 --4.0862 0.0001 --4.0165 0.0001 --3.9468 0.0002 --3.8770 0.0002 --3.8073 0.0003 --3.7375 0.0004 --3.6678 0.0005 --3.5980 0.0006 --3.5283 0.0008 --3.4586 0.0010 --3.3888 0.0013 --3.3191 0.0016 --3.2493 0.0020 --3.1796 0.0026 --3.1098 0.0032 --3.0401 0.0040 --2.9704 0.0049 --2.9006 0.0060 --2.8309 0.0073 --2.7611 0.0089 --2.6914 0.0107 --2.6217 0.0129 --2.5519 0.0154 --2.4822 0.0184 --2.4124 0.0218 --2.3427 0.0257 --2.2729 0.0302 --2.2032 0.0353 --2.1335 0.0411 --2.0637 0.0476 --1.9940 0.0548 --1.9242 0.0628 --1.8545 0.0716 --1.7847 0.0813 --1.7150 0.0918 --1.6453 0.1032 --1.5755 0.1155 --1.5058 0.1285 --1.4360 0.1424 --1.3663 0.1570 --1.2966 0.1722 --1.2268 0.1880 --1.1571 0.2043 --1.0873 0.2209 --1.0176 0.2377 --0.9478 0.2546 --0.8781 0.2713 --0.8084 0.2877 --0.7386 0.3036 --0.6689 0.3188 --0.5991 0.3332 --0.5294 0.3466 --0.4596 0.3587 --0.3899 0.3695 --0.3202 0.3787 --0.2504 0.3863 --0.1807 0.3922 --0.1109 0.3962 --0.0412 0.3983 -0.0286 0.3985 -0.0983 0.3967 -0.1680 0.3930 -0.2378 0.3875 -0.3075 0.3802 -0.3773 0.3713 -0.4470 0.3608 -0.5167 0.3489 -0.5865 0.3357 -0.6562 0.3215 -0.7260 0.3064 -0.7957 0.2906 -0.8655 0.2743 -0.9352 0.2576 -1.0049 0.2408 -1.0747 0.2240 -1.1444 0.2073 -1.2142 0.1910 -1.2839 0.1751 -1.3537 0.1597 -1.4234 0.1450 -1.4931 0.1310 -1.5629 0.1178 -1.6326 0.1054 -1.7024 0.0938 -1.7721 0.0831 -1.8418 0.0733 -1.9116 0.0643 -1.9813 0.0562 -2.0511 0.0488 -2.1208 0.0422 -2.1906 0.0363 -2.2603 0.0311 -2.3300 0.0265 -2.3998 0.0225 -2.4695 0.0190 -2.5393 0.0159 -2.6090 0.0133 -2.6788 0.0111 -2.7485 0.0092 -2.8182 0.0076 -2.8880 0.0062 -Oas3 1 -250 150 -3 2 3 7 -1 9 --3.0744 0.0017 --3.0125 0.0021 --2.9506 0.0026 --2.8888 0.0032 --2.8269 0.0039 --2.7650 0.0048 --2.7031 0.0059 --2.6413 0.0072 --2.5794 0.0087 --2.5175 0.0104 --2.4556 0.0125 --2.3938 0.0149 --2.3319 0.0177 --2.2700 0.0209 --2.2081 0.0246 --2.1463 0.0289 --2.0844 0.0337 --2.0225 0.0391 --1.9606 0.0452 --1.8988 0.0520 --1.8369 0.0595 --1.7750 0.0679 --1.7132 0.0771 --1.6513 0.0871 --1.5894 0.0980 --1.5275 0.1098 --1.4657 0.1224 --1.4038 0.1358 --1.3419 0.1501 --1.2800 0.1651 --1.2182 0.1808 --1.1563 0.1971 --1.0944 0.2139 --1.0325 0.2311 --0.9707 0.2486 --0.9088 0.2662 --0.8469 0.2837 --0.7850 0.3011 --0.7232 0.3181 --0.6613 0.3345 --0.5994 0.3502 --0.5375 0.3650 --0.4757 0.3787 --0.4138 0.3911 --0.3519 0.4021 --0.2901 0.4116 --0.2282 0.4195 --0.1663 0.4255 --0.1044 0.4297 --0.0426 0.4320 -0.0193 0.4324 -0.0812 0.4308 -0.1431 0.4273 -0.2049 0.4220 -0.2668 0.4148 -0.3287 0.4059 -0.3906 0.3954 -0.4524 0.3835 -0.5143 0.3702 -0.5762 0.3558 -0.6381 0.3405 -0.6999 0.3243 -0.7618 0.3075 -0.8237 0.2903 -0.8856 0.2728 -0.9474 0.2552 -1.0093 0.2377 -1.0712 0.2204 -1.1331 0.2034 -1.1949 0.1869 -1.2568 0.1709 -1.3187 0.1557 -1.3805 0.1411 -1.4424 0.1273 -1.5043 0.1144 -1.5662 0.1023 -1.6280 0.0911 -1.6899 0.0807 -1.7518 0.0712 -1.8137 0.0626 -1.8755 0.0547 -1.9374 0.0476 -1.9993 0.0413 -2.0612 0.0356 -2.1230 0.0306 -2.1849 0.0262 -2.2468 0.0223 -2.3087 0.0189 -2.3705 0.0159 -2.4324 0.0134 -2.4943 0.0112 -2.5562 0.0093 -2.6180 0.0077 -2.6799 0.0064 -2.7418 0.0052 -2.8037 0.0043 -2.8655 0.0035 -2.9274 0.0028 -2.9893 0.0023 -3.0511 0.0018 -3.1130 0.0015 -Pglyrp3 1 -250 150 -4 3 6 7 8 -0 --3.5690 0.0011 --3.5005 0.0014 --3.4321 0.0017 --3.3636 0.0021 --3.2951 0.0026 --3.2266 0.0032 --3.1581 0.0039 --3.0897 0.0047 --3.0212 0.0057 --2.9527 0.0069 --2.8842 0.0083 --2.8157 0.0100 --2.7472 0.0119 --2.6788 0.0141 --2.6103 0.0166 --2.5418 0.0196 --2.4733 0.0229 --2.4048 0.0267 --2.3364 0.0310 --2.2679 0.0359 --2.1994 0.0413 --2.1309 0.0474 --2.0624 0.0541 --1.9939 0.0614 --1.9255 0.0695 --1.8570 0.0783 --1.7885 0.0878 --1.7200 0.0981 --1.6515 0.1091 --1.5831 0.1208 --1.5146 0.1332 --1.4461 0.1462 --1.3776 0.1598 --1.3091 0.1739 --1.2406 0.1885 --1.1722 0.2034 --1.1037 0.2185 --1.0352 0.2337 --0.9667 0.2490 --0.8982 0.2640 --0.8298 0.2788 --0.7613 0.2931 --0.6928 0.3069 --0.6243 0.3199 --0.5558 0.3320 --0.4873 0.3431 --0.4189 0.3530 --0.3504 0.3617 --0.2819 0.3690 --0.2134 0.3748 --0.1449 0.3790 --0.0765 0.3817 --0.0080 0.3827 -0.0605 0.3821 -0.1290 0.3798 -0.1975 0.3759 -0.2660 0.3705 -0.3344 0.3635 -0.4029 0.3552 -0.4714 0.3455 -0.5399 0.3347 -0.6084 0.3228 -0.6769 0.3100 -0.7453 0.2964 -0.8138 0.2822 -0.8823 0.2675 -0.9508 0.2525 -1.0193 0.2373 -1.0877 0.2220 -1.1562 0.2069 -1.2247 0.1919 -1.2932 0.1773 -1.3617 0.1631 -1.4302 0.1493 -1.4986 0.1362 -1.5671 0.1236 -1.6356 0.1118 -1.7041 0.1006 -1.7726 0.0902 -1.8410 0.0804 -1.9095 0.0715 -1.9780 0.0632 -2.0465 0.0557 -2.1150 0.0489 -2.1835 0.0427 -2.2519 0.0371 -2.3204 0.0321 -2.3889 0.0277 -2.4574 0.0238 -2.5259 0.0203 -2.5943 0.0173 -2.6628 0.0147 -2.7313 0.0124 -2.7998 0.0104 -2.8683 0.0087 -2.9368 0.0072 -3.0052 0.0060 -3.0737 0.0050 -3.1422 0.0041 -3.2107 0.0033 -3.2792 0.0027 -Parp9 1 -250 150 -2 2 6 -1 11 --2.7999 0.0080 --2.7399 0.0094 --2.6799 0.0111 --2.6199 0.0130 --2.5599 0.0152 --2.4999 0.0177 --2.4399 0.0205 --2.3799 0.0237 --2.3199 0.0272 --2.2599 0.0312 --2.1999 0.0357 --2.1398 0.0406 --2.0798 0.0461 --2.0198 0.0521 --1.9598 0.0587 --1.8998 0.0659 --1.8398 0.0737 --1.7798 0.0821 --1.7198 0.0912 --1.6598 0.1009 --1.5998 0.1112 --1.5398 0.1222 --1.4798 0.1337 --1.4198 0.1458 --1.3598 0.1585 --1.2997 0.1716 --1.2397 0.1851 --1.1797 0.1990 --1.1197 0.2132 --1.0597 0.2276 --0.9997 0.2420 --0.9397 0.2565 --0.8797 0.2709 --0.8197 0.2850 --0.7597 0.2988 --0.6997 0.3121 --0.6397 0.3249 --0.5797 0.3369 --0.5197 0.3482 --0.4596 0.3586 --0.3996 0.3679 --0.3396 0.3761 --0.2796 0.3832 --0.2196 0.3889 --0.1596 0.3934 --0.0996 0.3964 --0.0396 0.3981 -0.0204 0.3983 -0.0804 0.3971 -0.1404 0.3945 -0.2004 0.3905 -0.2604 0.3851 -0.3204 0.3785 -0.3805 0.3706 -0.4405 0.3617 -0.5005 0.3516 -0.5605 0.3406 -0.6205 0.3288 -0.6805 0.3163 -0.7405 0.3031 -0.8005 0.2894 -0.8605 0.2754 -0.9205 0.2611 -0.9805 0.2467 -1.0405 0.2322 -1.1005 0.2178 -1.1605 0.2035 -1.2206 0.1895 -1.2806 0.1759 -1.3406 0.1626 -1.4006 0.1498 -1.4606 0.1375 -1.5206 0.1258 -1.5806 0.1146 -1.6406 0.1041 -1.7006 0.0942 -1.7606 0.0849 -1.8206 0.0763 -1.8806 0.0683 -1.9406 0.0609 -2.0006 0.0541 -2.0607 0.0480 -2.1207 0.0423 -2.1807 0.0372 -2.2407 0.0326 -2.3007 0.0285 -2.3607 0.0247 -2.4207 0.0214 -2.4807 0.0185 -2.5407 0.0159 -2.6007 0.0137 -2.6607 0.0117 -2.7207 0.0099 -2.7807 0.0084 -2.8407 0.0071 -2.9008 0.0060 -2.9608 0.0050 -3.0208 0.0042 -3.0808 0.0035 -3.1408 0.0029 -3.2008 0.0024 -Oas1a 1 -250 150 -1 10 -0 --3.0946 0.0034 --3.0304 0.0042 --2.9662 0.0051 --2.9019 0.0061 --2.8377 0.0073 --2.7735 0.0087 --2.7093 0.0104 --2.6450 0.0124 --2.5808 0.0146 --2.5166 0.0172 --2.4524 0.0201 --2.3881 0.0235 --2.3239 0.0273 --2.2597 0.0316 --2.1955 0.0364 --2.1312 0.0417 --2.0670 0.0477 --2.0028 0.0543 --1.9385 0.0616 --1.8743 0.0695 --1.8101 0.0782 --1.7459 0.0876 --1.6816 0.0977 --1.6174 0.1085 --1.5532 0.1201 --1.4890 0.1323 --1.4247 0.1452 --1.3605 0.1586 --1.2963 0.1727 --1.2320 0.1871 --1.1678 0.2020 --1.1036 0.2172 --1.0394 0.2325 --0.9751 0.2479 --0.9109 0.2633 --0.8467 0.2785 --0.7825 0.2933 --0.7182 0.3077 --0.6540 0.3214 --0.5898 0.3344 --0.5256 0.3465 --0.4613 0.3576 --0.3971 0.3675 --0.3329 0.3761 --0.2686 0.3834 --0.2044 0.3892 --0.1402 0.3935 --0.0760 0.3963 --0.0117 0.3974 -0.0525 0.3969 -0.1167 0.3947 -0.1809 0.3910 -0.2452 0.3857 -0.3094 0.3790 -0.3736 0.3708 -0.4378 0.3613 -0.5021 0.3507 -0.5663 0.3389 -0.6305 0.3263 -0.6948 0.3128 -0.7590 0.2986 -0.8232 0.2839 -0.8874 0.2689 -0.9517 0.2536 -1.0159 0.2382 -1.0801 0.2228 -1.1443 0.2075 -1.2086 0.1925 -1.2728 0.1779 -1.3370 0.1637 -1.4012 0.1500 -1.4655 0.1369 -1.5297 0.1245 -1.5939 0.1127 -1.6582 0.1016 -1.7224 0.0912 -1.7866 0.0816 -1.8508 0.0726 -1.9151 0.0644 -1.9793 0.0569 -2.0435 0.0501 -2.1077 0.0439 -2.1720 0.0383 -2.2362 0.0332 -2.3004 0.0288 -2.3646 0.0248 -2.4289 0.0213 -2.4931 0.0182 -2.5573 0.0155 -2.6216 0.0131 -2.6858 0.0111 -2.7500 0.0093 -2.8142 0.0078 -2.8785 0.0065 -2.9427 0.0054 -3.0069 0.0045 -3.0711 0.0037 -3.1354 0.0030 -3.1996 0.0025 -3.2638 0.0020 -3.3280 0.0016 -Ifit1 1 -250 150 -3 1 2 4 -2 13 14 --2.8983 0.0063 --2.8370 0.0075 --2.7756 0.0089 --2.7142 0.0105 --2.6528 0.0124 --2.5915 0.0145 --2.5301 0.0169 --2.4687 0.0197 --2.4073 0.0228 --2.3460 0.0264 --2.2846 0.0303 --2.2232 0.0347 --2.1618 0.0397 --2.1005 0.0451 --2.0391 0.0511 --1.9777 0.0577 --1.9164 0.0649 --1.8550 0.0728 --1.7936 0.0812 --1.7322 0.0904 --1.6709 0.1002 --1.6095 0.1106 --1.5481 0.1217 --1.4867 0.1333 --1.4254 0.1456 --1.3640 0.1584 --1.3026 0.1717 --1.2412 0.1854 --1.1799 0.1995 --1.1185 0.2138 --1.0571 0.2284 --0.9957 0.2430 --0.9344 0.2576 --0.8730 0.2720 --0.8116 0.2862 --0.7502 0.3001 --0.6889 0.3134 --0.6275 0.3261 --0.5661 0.3381 --0.5047 0.3492 --0.4434 0.3593 --0.3820 0.3684 --0.3206 0.3763 --0.2592 0.3830 --0.1979 0.3883 --0.1365 0.3922 --0.0751 0.3948 --0.0137 0.3958 -0.0476 0.3954 -0.1090 0.3936 -0.1704 0.3902 -0.2318 0.3855 -0.2931 0.3795 -0.3545 0.3721 -0.4159 0.3635 -0.4773 0.3539 -0.5386 0.3432 -0.6000 0.3316 -0.6614 0.3192 -0.7228 0.3061 -0.7841 0.2925 -0.8455 0.2784 -0.9069 0.2641 -0.9682 0.2495 -1.0296 0.2349 -1.0910 0.2203 -1.1524 0.2059 -1.2137 0.1917 -1.2751 0.1778 -1.3365 0.1643 -1.3979 0.1513 -1.4592 0.1388 -1.5206 0.1268 -1.5820 0.1155 -1.6434 0.1047 -1.7047 0.0947 -1.7661 0.0852 -1.8275 0.0765 -1.8889 0.0683 -1.9502 0.0609 -2.0116 0.0540 -2.0730 0.0477 -2.1344 0.0420 -2.1957 0.0369 -2.2571 0.0322 -2.3185 0.0281 -2.3799 0.0244 -2.4412 0.0211 -2.5026 0.0181 -2.5640 0.0156 -2.6254 0.0133 -2.6867 0.0113 -2.7481 0.0096 -2.8095 0.0081 -2.8709 0.0068 -2.9322 0.0057 -2.9936 0.0048 -3.0550 0.0040 -3.1164 0.0033 -3.1777 0.0027 -3.2391 0.0023 -Mx1 1 -250 150 -2 4 12 -0 --3.1709 0.0028 --3.0983 0.0035 --3.0258 0.0043 --2.9533 0.0053 --2.8808 0.0066 --2.8082 0.0081 --2.7357 0.0098 --2.6632 0.0119 --2.5907 0.0144 --2.5181 0.0173 --2.4456 0.0207 --2.3731 0.0246 --2.3006 0.0291 --2.2280 0.0342 --2.1555 0.0400 --2.0830 0.0465 --2.0105 0.0539 --1.9379 0.0621 --1.8654 0.0711 --1.7929 0.0811 --1.7204 0.0919 --1.6479 0.1037 --1.5753 0.1164 --1.5028 0.1300 --1.4303 0.1444 --1.3578 0.1595 --1.2852 0.1754 --1.2127 0.1918 --1.1402 0.2086 --1.0677 0.2258 --0.9951 0.2431 --0.9226 0.2604 --0.8501 0.2775 --0.7776 0.2941 --0.7050 0.3102 --0.6325 0.3254 --0.5600 0.3396 --0.4875 0.3526 --0.4149 0.3641 --0.3424 0.3742 --0.2699 0.3824 --0.1974 0.3889 --0.1248 0.3934 --0.0523 0.3959 -0.0202 0.3964 -0.0927 0.3948 -0.1653 0.3911 -0.2378 0.3855 -0.3103 0.3780 -0.3828 0.3688 -0.4554 0.3579 -0.5279 0.3455 -0.6004 0.3318 -0.6729 0.3170 -0.7455 0.3013 -0.8180 0.2849 -0.8905 0.2680 -0.9630 0.2508 -1.0356 0.2335 -1.1081 0.2162 -1.1806 0.1992 -1.2531 0.1826 -1.3257 0.1665 -1.3982 0.1510 -1.4707 0.1363 -1.5432 0.1223 -1.6158 0.1092 -1.6883 0.0970 -1.7608 0.0858 -1.8333 0.0754 -1.9059 0.0660 -1.9784 0.0574 -2.0509 0.0497 -2.1234 0.0428 -2.1959 0.0367 -2.2685 0.0312 -2.3410 0.0265 -2.4135 0.0223 -2.4860 0.0187 -2.5586 0.0156 -2.6311 0.0130 -2.7036 0.0107 -2.7761 0.0088 -2.8487 0.0072 -2.9212 0.0059 -2.9937 0.0047 -3.0662 0.0038 -3.1388 0.0031 -3.2113 0.0024 -3.2838 0.0019 -3.3563 0.0015 -3.4289 0.0012 -3.5014 0.0009 -3.5739 0.0007 -3.6464 0.0006 -3.7190 0.0004 -3.7915 0.0003 -3.8640 0.0002 -3.9365 0.0002 -4.0091 0.0001 -4.0816 0.0001 -Irf7 1 -250 150 -2 4 12 -0 --3.9154 0.0002 --3.8440 0.0003 --3.7726 0.0004 --3.7012 0.0005 --3.6298 0.0006 --3.5583 0.0008 --3.4869 0.0010 --3.4155 0.0013 --3.3441 0.0016 --3.2727 0.0021 --3.2013 0.0026 --3.1299 0.0033 --3.0585 0.0040 --2.9871 0.0050 --2.9157 0.0061 --2.8443 0.0075 --2.7729 0.0091 --2.7015 0.0111 --2.6301 0.0133 --2.5587 0.0160 --2.4873 0.0191 --2.4159 0.0226 --2.3445 0.0267 --2.2730 0.0314 --2.2016 0.0367 --2.1302 0.0428 --2.0588 0.0495 --1.9874 0.0570 --1.9160 0.0654 --1.8446 0.0746 --1.7732 0.0846 --1.7018 0.0956 --1.6304 0.1074 --1.5590 0.1201 --1.4876 0.1336 --1.4162 0.1478 --1.3448 0.1628 --1.2734 0.1784 --1.2020 0.1946 --1.1306 0.2111 --1.0592 0.2279 --0.9878 0.2448 --0.9163 0.2617 --0.8449 0.2783 --0.7735 0.2946 --0.7021 0.3102 --0.6307 0.3250 --0.5593 0.3388 --0.4879 0.3514 --0.4165 0.3627 --0.3451 0.3725 --0.2737 0.3806 --0.2023 0.3870 --0.1309 0.3916 --0.0595 0.3942 -0.0119 0.3948 -0.0833 0.3935 -0.1547 0.3903 -0.2261 0.3851 -0.2975 0.3781 -0.3690 0.3694 -0.4404 0.3591 -0.5118 0.3473 -0.5832 0.3343 -0.6546 0.3201 -0.7260 0.3050 -0.7974 0.2892 -0.8688 0.2728 -0.9402 0.2561 -1.0116 0.2392 -1.0830 0.2223 -1.1544 0.2056 -1.2258 0.1891 -1.2972 0.1732 -1.3686 0.1577 -1.4400 0.1430 -1.5114 0.1290 -1.5828 0.1157 -1.6543 0.1033 -1.7257 0.0918 -1.7971 0.0812 -1.8685 0.0714 -1.9399 0.0625 -2.0113 0.0544 -2.0827 0.0472 -2.1541 0.0407 -2.2255 0.0349 -2.2969 0.0298 -2.3683 0.0253 -2.4397 0.0214 -2.5111 0.0180 -2.5825 0.0151 -2.6539 0.0125 -2.7253 0.0104 -2.7967 0.0086 -2.8681 0.0070 -2.9396 0.0057 -3.0110 0.0047 -3.0824 0.0038 -3.1538 0.0030 -3.2252 0.0024 diff --git a/sourcecodes/data/Swznet_figure_new.txt b/sourcecodes/data/Swznet_figure_new.txt deleted file mode 100644 index 912d6251..00000000 --- a/sourcecodes/data/Swznet_figure_new.txt +++ /dev/null @@ -1,1287 +0,0 @@ -1 6 -14 -1200 1400 -rs3664317 360 0 -Ifih1 480 175 -Cd1d1 160 350 -Dhx58 560 350 -Oas1g 180 525 -Trim25 480 525 -Pml 0 700 -Oas3 280 875 -Pglyrp3 360 1050 -Parp9 240 700 -Oas1a 680 875 -Ifit1 780 525 -Mx1 480 700 -Irf7 720 700 -rs3664317 2 -250 150 -0 -5 2 3 4 5 12 -1.0000 1.0000 -Ifih1 1 -250 150 -1 1 -6 3 4 6 8 10 12 --3.1997 0.0000 --3.1378 0.0000 --3.0758 0.0000 --3.0138 0.0000 --2.9518 0.0000 --2.8899 0.0000 --2.8279 0.0000 --2.7659 0.0001 --2.7039 0.0002 --2.6420 0.0003 --2.5800 0.0005 --2.5180 0.0009 --2.4560 0.0015 --2.3941 0.0025 --2.3321 0.0040 --2.2701 0.0064 --2.2081 0.0100 --2.1462 0.0153 --2.0842 0.0230 --2.0222 0.0338 --1.9602 0.0486 --1.8983 0.0684 --1.8363 0.0943 --1.7743 0.1273 --1.7124 0.1683 --1.6504 0.2178 --1.5884 0.2761 --1.5264 0.3426 --1.4645 0.4163 --1.4025 0.4954 --1.3405 0.5772 --1.2785 0.6585 --1.2166 0.7356 --1.1546 0.8046 --1.0926 0.8617 --1.0306 0.9037 --0.9687 0.9281 --0.9067 0.9332 --0.8447 0.9188 --0.7827 0.8858 --0.7208 0.8362 --0.6588 0.7730 --0.5968 0.6996 --0.5348 0.6201 --0.4729 0.5381 --0.4109 0.4573 --0.3489 0.3805 --0.2870 0.3100 --0.2250 0.2473 --0.1630 0.1932 --0.1010 0.1478 --0.0391 0.1107 -0.0229 0.0812 -0.0849 0.0583 -0.1469 0.0410 -0.2088 0.0282 -0.2708 0.0190 -0.3328 0.0126 -0.3948 0.0081 -0.4567 0.0051 -0.5187 0.0032 -0.5807 0.0019 -0.6427 0.0011 -0.7046 0.0007 -0.7666 0.0004 -0.8286 0.0002 -0.8906 0.0001 -0.9525 0.0001 -1.0145 0.0000 -1.0765 0.0000 -1.1385 0.0000 -1.2004 0.0000 -1.2624 0.0000 -1.3244 0.0000 -1.3863 0.0000 -1.4483 0.0000 -1.5103 0.0000 -1.5723 0.0000 -1.6342 0.0000 -1.6962 0.0000 -1.7582 0.0000 -1.8202 0.0000 -1.8821 0.0000 -1.9441 0.0000 -2.0061 0.0000 -2.0681 0.0000 -2.1300 0.0000 -2.1920 0.0000 -2.2540 0.0000 -2.3160 0.0000 -2.3779 0.0000 -2.4399 0.0000 -2.5019 0.0000 -2.5639 0.0000 -2.6258 0.0000 -2.6878 0.0000 -2.7498 0.0000 -2.8117 0.0000 -2.8737 0.0000 -2.9357 0.0000 -2.9977 0.0000 -Cd1d1 1 -250 150 -2 1 2 -3 6 8 9 --3.4620 0.0001 --3.3962 0.0001 --3.3304 0.0001 --3.2645 0.0001 --3.1987 0.0002 --3.1328 0.0003 --3.0670 0.0003 --3.0011 0.0004 --2.9353 0.0006 --2.8694 0.0007 --2.8036 0.0009 --2.7378 0.0012 --2.6719 0.0015 --2.6061 0.0020 --2.5402 0.0025 --2.4744 0.0031 --2.4085 0.0039 --2.3427 0.0048 --2.2768 0.0060 --2.2110 0.0073 --2.1452 0.0090 --2.0793 0.0110 --2.0135 0.0133 --1.9476 0.0160 --1.8818 0.0192 --1.8159 0.0229 --1.7501 0.0272 --1.6843 0.0321 --1.6184 0.0378 --1.5526 0.0441 --1.4867 0.0513 --1.4209 0.0594 --1.3550 0.0684 --1.2892 0.0783 --1.2233 0.0892 --1.1575 0.1011 --1.0917 0.1140 --1.0258 0.1278 --0.9600 0.1427 --0.8941 0.1584 --0.8283 0.1749 --0.7624 0.1922 --0.6966 0.2102 --0.6308 0.2286 --0.5649 0.2473 --0.4991 0.2662 --0.4332 0.2851 --0.3674 0.3038 --0.3015 0.3220 --0.2357 0.3395 --0.1698 0.3562 --0.1040 0.3718 --0.0382 0.3860 -0.0277 0.3987 -0.0935 0.4098 -0.1594 0.4190 -0.2252 0.4262 -0.2911 0.4312 -0.3569 0.4341 -0.4227 0.4348 -0.4886 0.4333 -0.5544 0.4295 -0.6203 0.4236 -0.6861 0.4156 -0.7520 0.4056 -0.8178 0.3939 -0.8837 0.3805 -0.9495 0.3658 -1.0153 0.3497 -1.0812 0.3327 -1.1470 0.3148 -1.2129 0.2964 -1.2787 0.2777 -1.3446 0.2587 -1.4104 0.2399 -1.4763 0.2212 -1.5421 0.2030 -1.6079 0.1853 -1.6738 0.1683 -1.7396 0.1521 -1.8055 0.1367 -1.8713 0.1222 -1.9372 0.1087 -2.0030 0.0962 -2.0688 0.0847 -2.1347 0.0742 -2.2005 0.0647 -2.2664 0.0561 -2.3322 0.0484 -2.3981 0.0415 -2.4639 0.0354 -2.5298 0.0301 -2.5956 0.0254 -2.6614 0.0214 -2.7273 0.0179 -2.7931 0.0149 -2.8590 0.0123 -2.9248 0.0101 -2.9907 0.0083 -3.0565 0.0068 -3.1223 0.0055 -Dhx58 1 -250 150 -2 1 2 -5 5 6 12 13 14 --3.2125 0.0002 --3.1470 0.0002 --3.0814 0.0004 --3.0159 0.0006 --2.9503 0.0009 --2.8848 0.0013 --2.8192 0.0020 --2.7536 0.0029 --2.6881 0.0042 --2.6225 0.0060 --2.5570 0.0085 --2.4914 0.0118 --2.4258 0.0162 --2.3603 0.0220 --2.2947 0.0295 --2.2292 0.0389 --2.1636 0.0508 --2.0980 0.0654 --2.0325 0.0831 --1.9669 0.1043 --1.9014 0.1293 --1.8358 0.1581 --1.7702 0.1909 --1.7047 0.2275 --1.6391 0.2677 --1.5736 0.3109 --1.5080 0.3566 --1.4425 0.4037 --1.3769 0.4511 --1.3113 0.4977 --1.2458 0.5421 --1.1802 0.5829 --1.1147 0.6187 --1.0491 0.6483 --0.9835 0.6706 --0.9180 0.6849 --0.8524 0.6905 --0.7869 0.6872 --0.7213 0.6752 --0.6557 0.6549 --0.5902 0.6271 --0.5246 0.5928 --0.4591 0.5532 --0.3935 0.5097 --0.3280 0.4635 --0.2624 0.4162 --0.1968 0.3689 --0.1313 0.3228 --0.0657 0.2788 --0.0002 0.2378 -0.0654 0.2002 -0.1310 0.1663 -0.1965 0.1365 -0.2621 0.1105 -0.3276 0.0884 -0.3932 0.0698 -0.4588 0.0544 -0.5243 0.0418 -0.5899 0.0318 -0.6554 0.0238 -0.7210 0.0176 -0.7866 0.0129 -0.8521 0.0093 -0.9177 0.0066 -0.9832 0.0046 -1.0488 0.0032 -1.1143 0.0022 -1.1799 0.0015 -1.2455 0.0010 -1.3110 0.0007 -1.3766 0.0004 -1.4421 0.0003 -1.5077 0.0002 -1.5733 0.0001 -1.6388 0.0001 -1.7044 0.0000 -1.7699 0.0000 -1.8355 0.0000 -1.9011 0.0000 -1.9666 0.0000 -2.0322 0.0000 -2.0977 0.0000 -2.1633 0.0000 -2.2288 0.0000 -2.2944 0.0000 -2.3600 0.0000 -2.4255 0.0000 -2.4911 0.0000 -2.5566 0.0000 -2.6222 0.0000 -2.6878 0.0000 -2.7533 0.0000 -2.8189 0.0000 -2.8844 0.0000 -2.9500 0.0000 -3.0156 0.0000 -3.0811 0.0000 -3.1467 0.0000 -3.2122 0.0000 -3.2778 0.0000 -3.3434 0.0000 -Oas1g 1 -250 150 -2 1 4 -0 --3.5192 0.0000 --3.4507 0.0000 --3.3821 0.0000 --3.3135 0.0000 --3.2449 0.0000 --3.1763 0.0000 --3.1077 0.0000 --3.0391 0.0000 --2.9705 0.0000 --2.9019 0.0001 --2.8334 0.0001 --2.7648 0.0002 --2.6962 0.0003 --2.6276 0.0006 --2.5590 0.0010 --2.4904 0.0016 --2.4218 0.0025 --2.3532 0.0039 --2.2847 0.0061 --2.2161 0.0092 --2.1475 0.0137 --2.0789 0.0200 --2.0103 0.0287 --1.9417 0.0404 --1.8731 0.0558 --1.8045 0.0757 --1.7359 0.1008 --1.6674 0.1318 --1.5988 0.1690 --1.5302 0.2129 --1.4616 0.2631 --1.3930 0.3193 --1.3244 0.3802 --1.2558 0.4445 --1.1872 0.5100 --1.1186 0.5744 --1.0501 0.6350 --0.9815 0.6891 --0.9129 0.7340 --0.8443 0.7674 --0.7757 0.7875 --0.7071 0.7933 --0.6385 0.7844 --0.5699 0.7612 --0.5014 0.7252 --0.4328 0.6781 --0.3642 0.6224 --0.2956 0.5607 --0.2270 0.4959 --0.1584 0.4304 --0.0898 0.3667 --0.0212 0.3067 -0.0474 0.2518 -0.1159 0.2029 -0.1845 0.1604 -0.2531 0.1246 -0.3217 0.0949 -0.3903 0.0710 -0.4589 0.0521 -0.5275 0.0376 -0.5961 0.0266 -0.6646 0.0185 -0.7332 0.0126 -0.8018 0.0084 -0.8704 0.0055 -0.9390 0.0036 -1.0076 0.0023 -1.0762 0.0014 -1.1448 0.0009 -1.2134 0.0005 -1.2819 0.0003 -1.3505 0.0002 -1.4191 0.0001 -1.4877 0.0001 -1.5563 0.0000 -1.6249 0.0000 -1.6935 0.0000 -1.7621 0.0000 -1.8307 0.0000 -1.8992 0.0000 -1.9678 0.0000 -2.0364 0.0000 -2.1050 0.0000 -2.1736 0.0000 -2.2422 0.0000 -2.3108 0.0000 -2.3794 0.0000 -2.4479 0.0000 -2.5165 0.0000 -2.5851 0.0000 -2.6537 0.0000 -2.7223 0.0000 -2.7909 0.0000 -2.8595 0.0000 -2.9281 0.0000 -2.9967 0.0000 -3.0652 0.0000 -3.1338 0.0000 -3.2024 0.0000 -3.2710 0.0000 -3.3396 0.0000 -Trim25 1 -250 150 -3 2 3 4 -3 7 9 10 --1.4446 1.0000 -Pml 1 -250 150 -1 6 -2 8 9 --4.0862 0.0000 --4.0165 0.0000 --3.9468 0.0000 --3.8770 0.0000 --3.8073 0.0000 --3.7375 0.0000 --3.6678 0.0000 --3.5980 0.0001 --3.5283 0.0001 --3.4586 0.0002 --3.3888 0.0003 --3.3191 0.0004 --3.2493 0.0007 --3.1796 0.0010 --3.1098 0.0014 --3.0401 0.0021 --2.9704 0.0030 --2.9006 0.0042 --2.8309 0.0059 --2.7611 0.0081 --2.6914 0.0111 --2.6217 0.0150 --2.5519 0.0200 --2.4822 0.0264 --2.4124 0.0344 --2.3427 0.0444 --2.2729 0.0566 --2.2032 0.0712 --2.1335 0.0887 --2.0637 0.1091 --1.9940 0.1326 --1.9242 0.1594 --1.8545 0.1894 --1.7847 0.2223 --1.7150 0.2580 --1.6453 0.2959 --1.5755 0.3355 --1.5058 0.3759 --1.4360 0.4163 --1.3663 0.4556 --1.2966 0.4929 --1.2268 0.5271 --1.1571 0.5570 --1.0873 0.5819 --1.0176 0.6007 --0.9478 0.6130 --0.8781 0.6183 --0.8084 0.6163 --0.7386 0.6072 --0.6689 0.5913 --0.5991 0.5692 --0.5294 0.5414 --0.4596 0.5091 --0.3899 0.4731 --0.3202 0.4346 --0.2504 0.3945 --0.1807 0.3540 --0.1109 0.3140 --0.0412 0.2752 -0.0286 0.2384 -0.0983 0.2042 -0.1680 0.1728 -0.2378 0.1446 -0.3075 0.1195 -0.3773 0.0977 -0.4470 0.0789 -0.5167 0.0630 -0.5865 0.0497 -0.6562 0.0388 -0.7260 0.0299 -0.7957 0.0228 -0.8655 0.0171 -0.9352 0.0128 -1.0049 0.0094 -1.0747 0.0068 -1.1444 0.0049 -1.2142 0.0035 -1.2839 0.0024 -1.3537 0.0017 -1.4234 0.0012 -1.4931 0.0008 -1.5629 0.0005 -1.6326 0.0003 -1.7024 0.0002 -1.7721 0.0001 -1.8418 0.0001 -1.9116 0.0001 -1.9813 0.0000 -2.0511 0.0000 -2.1208 0.0000 -2.1906 0.0000 -2.2603 0.0000 -2.3300 0.0000 -2.3998 0.0000 -2.4695 0.0000 -2.5393 0.0000 -2.6090 0.0000 -2.6788 0.0000 -2.7485 0.0000 -2.8182 0.0000 -2.8880 0.0000 -Oas3 1 -250 150 -3 2 3 7 -1 9 --3.0744 0.0002 --3.0125 0.0002 --2.9506 0.0004 --2.8888 0.0006 --2.8269 0.0009 --2.7650 0.0013 --2.7031 0.0020 --2.6413 0.0029 --2.5794 0.0042 --2.5175 0.0059 --2.4556 0.0083 --2.3938 0.0116 --2.3319 0.0159 --2.2700 0.0216 --2.2081 0.0289 --2.1463 0.0382 --2.0844 0.0498 --2.0225 0.0642 --1.9606 0.0817 --1.8988 0.1027 --1.8369 0.1274 --1.7750 0.1561 --1.7132 0.1889 --1.6513 0.2257 --1.5894 0.2662 --1.5275 0.3101 --1.4657 0.3567 --1.4038 0.4052 --1.3419 0.4545 --1.2800 0.5034 --1.2182 0.5506 --1.1563 0.5946 --1.0944 0.6341 --1.0325 0.6677 --0.9707 0.6943 --0.9088 0.7129 --0.8469 0.7228 --0.7850 0.7237 --0.7232 0.7155 --0.6613 0.6984 --0.5994 0.6733 --0.5375 0.6409 --0.4757 0.6024 --0.4138 0.5591 --0.3519 0.5124 --0.2901 0.4637 --0.2282 0.4144 --0.1663 0.3657 --0.1044 0.3187 --0.0426 0.2742 -0.0193 0.2330 -0.0812 0.1955 -0.1431 0.1619 -0.2049 0.1325 -0.2668 0.1070 -0.3287 0.0854 -0.3906 0.0672 -0.4524 0.0523 -0.5143 0.0402 -0.5762 0.0305 -0.6381 0.0228 -0.6999 0.0169 -0.7618 0.0123 -0.8237 0.0089 -0.8856 0.0063 -0.9474 0.0044 -1.0093 0.0031 -1.0712 0.0021 -1.1331 0.0014 -1.1949 0.0010 -1.2568 0.0006 -1.3187 0.0004 -1.3805 0.0003 -1.4424 0.0002 -1.5043 0.0001 -1.5662 0.0001 -1.6280 0.0000 -1.6899 0.0000 -1.7518 0.0000 -1.8137 0.0000 -1.8755 0.0000 -1.9374 0.0000 -1.9993 0.0000 -2.0612 0.0000 -2.1230 0.0000 -2.1849 0.0000 -2.2468 0.0000 -2.3087 0.0000 -2.3705 0.0000 -2.4324 0.0000 -2.4943 0.0000 -2.5562 0.0000 -2.6180 0.0000 -2.6799 0.0000 -2.7418 0.0000 -2.8037 0.0000 -2.8655 0.0000 -2.9274 0.0000 -2.9893 0.0000 -3.0511 0.0000 -3.1130 0.0000 -Pglyrp3 1 -250 150 -4 3 6 7 8 -0 --3.5690 0.0004 --3.5005 0.0005 --3.4321 0.0007 --3.3636 0.0008 --3.2951 0.0011 --3.2266 0.0013 --3.1581 0.0017 --3.0897 0.0021 --3.0212 0.0026 --2.9527 0.0032 --2.8842 0.0040 --2.8157 0.0049 --2.7472 0.0060 --2.6788 0.0073 --2.6103 0.0089 --2.5418 0.0107 --2.4733 0.0128 --2.4048 0.0153 --2.3364 0.0182 --2.2679 0.0215 --2.1994 0.0254 --2.1309 0.0297 --2.0624 0.0347 --1.9939 0.0402 --1.9255 0.0465 --1.8570 0.0535 --1.7885 0.0612 --1.7200 0.0697 --1.6515 0.0791 --1.5831 0.0893 --1.5146 0.1003 --1.4461 0.1121 --1.3776 0.1248 --1.3091 0.1382 --1.2406 0.1524 --1.1722 0.1672 --1.1037 0.1826 --1.0352 0.1985 --0.9667 0.2147 --0.8982 0.2312 --0.8298 0.2478 --0.7613 0.2644 --0.6928 0.2807 --0.6243 0.2966 --0.5558 0.3120 --0.4873 0.3266 --0.4189 0.3403 --0.3504 0.3530 --0.2819 0.3643 --0.2134 0.3743 --0.1449 0.3828 --0.0765 0.3896 --0.0080 0.3947 -0.0605 0.3979 -0.1290 0.3993 -0.1975 0.3988 -0.2660 0.3965 -0.3344 0.3923 -0.4029 0.3864 -0.4714 0.3788 -0.5399 0.3695 -0.6084 0.3588 -0.6769 0.3468 -0.7453 0.3336 -0.8138 0.3194 -0.8823 0.3044 -0.9508 0.2887 -1.0193 0.2726 -1.0877 0.2561 -1.1562 0.2395 -1.2247 0.2230 -1.2932 0.2066 -1.3617 0.1905 -1.4302 0.1748 -1.4986 0.1597 -1.5671 0.1452 -1.6356 0.1314 -1.7041 0.1183 -1.7726 0.1061 -1.8410 0.0947 -1.9095 0.0841 -1.9780 0.0743 -2.0465 0.0654 -2.1150 0.0573 -2.1835 0.0499 -2.2519 0.0433 -2.3204 0.0374 -2.3889 0.0321 -2.4574 0.0275 -2.5259 0.0234 -2.5943 0.0198 -2.6628 0.0167 -2.7313 0.0140 -2.7998 0.0117 -2.8683 0.0097 -2.9368 0.0081 -3.0052 0.0066 -3.0737 0.0054 -3.1422 0.0044 -3.2107 0.0036 -3.2792 0.0029 -Parp9 1 -250 150 -2 2 6 -1 11 --2.7999 0.0062 --2.7399 0.0083 --2.6799 0.0109 --2.6199 0.0142 --2.5599 0.0184 --2.4999 0.0236 --2.4399 0.0299 --2.3799 0.0377 --2.3199 0.0470 --2.2599 0.0581 --2.1999 0.0712 --2.1398 0.0864 --2.0798 0.1040 --2.0198 0.1240 --1.9598 0.1466 --1.8998 0.1717 --1.8398 0.1993 --1.7798 0.2292 --1.7198 0.2612 --1.6598 0.2951 --1.5998 0.3303 --1.5398 0.3664 --1.4798 0.4028 --1.4198 0.4389 --1.3598 0.4738 --1.2997 0.5070 --1.2397 0.5376 --1.1797 0.5649 --1.1197 0.5883 --1.0597 0.6071 --0.9997 0.6208 --0.9397 0.6292 --0.8797 0.6320 --0.8197 0.6290 --0.7597 0.6205 --0.6997 0.6065 --0.6397 0.5876 --0.5797 0.5641 --0.5197 0.5366 --0.4596 0.5059 --0.3996 0.4727 --0.3396 0.4377 --0.2796 0.4016 --0.2196 0.3652 --0.1596 0.3291 --0.0996 0.2939 --0.0396 0.2601 -0.0204 0.2282 -0.0804 0.1983 -0.1404 0.1708 -0.2004 0.1458 -0.2604 0.1233 -0.3204 0.1034 -0.3805 0.0859 -0.4405 0.0707 -0.5005 0.0577 -0.5605 0.0467 -0.6205 0.0374 -0.6805 0.0297 -0.7405 0.0234 -0.8005 0.0182 -0.8605 0.0141 -0.9205 0.0108 -0.9805 0.0082 -1.0405 0.0062 -1.1005 0.0046 -1.1605 0.0034 -1.2206 0.0025 -1.2806 0.0018 -1.3406 0.0013 -1.4006 0.0009 -1.4606 0.0007 -1.5206 0.0005 -1.5806 0.0003 -1.6406 0.0002 -1.7006 0.0001 -1.7606 0.0001 -1.8206 0.0001 -1.8806 0.0000 -1.9406 0.0000 -2.0006 0.0000 -2.0607 0.0000 -2.1207 0.0000 -2.1807 0.0000 -2.2407 0.0000 -2.3007 0.0000 -2.3607 0.0000 -2.4207 0.0000 -2.4807 0.0000 -2.5407 0.0000 -2.6007 0.0000 -2.6607 0.0000 -2.7207 0.0000 -2.7807 0.0000 -2.8407 0.0000 -2.9008 0.0000 -2.9608 0.0000 -3.0208 0.0000 -3.0808 0.0000 -3.1408 0.0000 -3.2008 0.0000 -Oas1a 1 -250 150 -1 10 -0 --3.0946 0.0051 --3.0304 0.0064 --2.9662 0.0081 --2.9019 0.0101 --2.8377 0.0125 --2.7735 0.0154 --2.7093 0.0189 --2.6450 0.0230 --2.5808 0.0279 --2.5166 0.0336 --2.4524 0.0401 --2.3881 0.0477 --2.3239 0.0563 --2.2597 0.0661 --2.1955 0.0771 --2.1312 0.0894 --2.0670 0.1030 --2.0028 0.1179 --1.9385 0.1342 --1.8743 0.1518 --1.8101 0.1706 --1.7459 0.1906 --1.6816 0.2116 --1.6174 0.2335 --1.5532 0.2561 --1.4890 0.2791 --1.4247 0.3024 --1.3605 0.3255 --1.2963 0.3483 --1.2320 0.3704 --1.1678 0.3914 --1.1036 0.4111 --1.0394 0.4291 --0.9751 0.4452 --0.9109 0.4590 --0.8467 0.4703 --0.7825 0.4790 --0.7182 0.4848 --0.6540 0.4877 --0.5898 0.4875 --0.5256 0.4844 --0.4613 0.4783 --0.3971 0.4694 --0.3329 0.4578 --0.2686 0.4438 --0.2044 0.4275 --0.1402 0.4093 --0.0760 0.3895 --0.0117 0.3684 -0.0525 0.3462 -0.1167 0.3234 -0.1809 0.3002 -0.2452 0.2770 -0.3094 0.2540 -0.3736 0.2315 -0.4378 0.2097 -0.5021 0.1887 -0.5663 0.1688 -0.6305 0.1501 -0.6948 0.1326 -0.7590 0.1165 -0.8232 0.1017 -0.8874 0.0882 -0.9517 0.0760 -1.0159 0.0651 -1.0801 0.0555 -1.1443 0.0469 -1.2086 0.0395 -1.2728 0.0330 -1.3370 0.0274 -1.4012 0.0226 -1.4655 0.0186 -1.5297 0.0151 -1.5939 0.0123 -1.6582 0.0099 -1.7224 0.0079 -1.7866 0.0063 -1.8508 0.0050 -1.9151 0.0039 -1.9793 0.0031 -2.0435 0.0024 -2.1077 0.0018 -2.1720 0.0014 -2.2362 0.0011 -2.3004 0.0008 -2.3646 0.0006 -2.4289 0.0005 -2.4931 0.0003 -2.5573 0.0003 -2.6216 0.0002 -2.6858 0.0001 -2.7500 0.0001 -2.8142 0.0001 -2.8785 0.0001 -2.9427 0.0000 -3.0069 0.0000 -3.0711 0.0000 -3.1354 0.0000 -3.1996 0.0000 -3.2638 0.0000 -3.3280 0.0000 -Ifit1 1 -250 150 -3 1 2 4 -2 13 14 --2.8983 0.0005 --2.8370 0.0007 --2.7756 0.0010 --2.7142 0.0015 --2.6528 0.0022 --2.5915 0.0032 --2.5301 0.0046 --2.4687 0.0066 --2.4073 0.0092 --2.3460 0.0126 --2.2846 0.0172 --2.2232 0.0232 --2.1618 0.0308 --2.1005 0.0404 --2.0391 0.0524 --1.9777 0.0671 --1.9164 0.0850 --1.8550 0.1062 --1.7936 0.1311 --1.7322 0.1599 --1.6709 0.1926 --1.6095 0.2292 --1.5481 0.2694 --1.4867 0.3127 --1.4254 0.3587 --1.3640 0.4063 --1.3026 0.4547 --1.2412 0.5026 --1.1799 0.5488 --1.1185 0.5919 --1.0571 0.6306 --0.9957 0.6637 --0.9344 0.6899 --0.8730 0.7084 --0.8116 0.7186 --0.7502 0.7199 --0.6889 0.7125 --0.6275 0.6965 --0.5661 0.6726 --0.5047 0.6416 --0.4434 0.6045 --0.3820 0.5627 --0.3206 0.5173 --0.2592 0.4698 --0.1979 0.4214 --0.1365 0.3734 --0.0751 0.3268 --0.0137 0.2826 -0.0476 0.2413 -0.1090 0.2036 -0.1704 0.1696 -0.2318 0.1396 -0.2931 0.1135 -0.3545 0.0912 -0.4159 0.0723 -0.4773 0.0567 -0.5386 0.0439 -0.6000 0.0336 -0.6614 0.0253 -0.7228 0.0189 -0.7841 0.0139 -0.8455 0.0101 -0.9069 0.0073 -0.9682 0.0052 -1.0296 0.0036 -1.0910 0.0025 -1.1524 0.0017 -1.2137 0.0012 -1.2751 0.0008 -1.3365 0.0005 -1.3979 0.0003 -1.4592 0.0002 -1.5206 0.0001 -1.5820 0.0001 -1.6434 0.0001 -1.7047 0.0000 -1.7661 0.0000 -1.8275 0.0000 -1.8889 0.0000 -1.9502 0.0000 -2.0116 0.0000 -2.0730 0.0000 -2.1344 0.0000 -2.1957 0.0000 -2.2571 0.0000 -2.3185 0.0000 -2.3799 0.0000 -2.4412 0.0000 -2.5026 0.0000 -2.5640 0.0000 -2.6254 0.0000 -2.6867 0.0000 -2.7481 0.0000 -2.8095 0.0000 -2.8709 0.0000 -2.9322 0.0000 -2.9936 0.0000 -3.0550 0.0000 -3.1164 0.0000 -3.1777 0.0000 -3.2391 0.0000 -Mx1 1 -250 150 -2 4 12 -0 --3.1709 0.0016 --3.0983 0.0022 --3.0258 0.0031 --2.9533 0.0042 --2.8808 0.0057 --2.8082 0.0076 --2.7357 0.0101 --2.6632 0.0133 --2.5907 0.0173 --2.5181 0.0222 --2.4456 0.0284 --2.3731 0.0359 --2.3006 0.0450 --2.2280 0.0558 --2.1555 0.0685 --2.0830 0.0833 --2.0105 0.1003 --1.9379 0.1196 --1.8654 0.1413 --1.7929 0.1653 --1.7204 0.1915 --1.6479 0.2197 --1.5753 0.2496 --1.5028 0.2809 --1.4303 0.3130 --1.3578 0.3454 --1.2852 0.3774 --1.2127 0.4085 --1.1402 0.4378 --1.0677 0.4647 --0.9951 0.4885 --0.9226 0.5085 --0.8501 0.5243 --0.7776 0.5353 --0.7050 0.5412 --0.6325 0.5419 --0.5600 0.5374 --0.4875 0.5278 --0.4149 0.5133 --0.3424 0.4944 --0.2699 0.4715 --0.1974 0.4454 --0.1248 0.4167 --0.0523 0.3860 -0.0202 0.3542 -0.0927 0.3218 -0.1653 0.2895 -0.2378 0.2580 -0.3103 0.2277 -0.3828 0.1990 -0.4554 0.1722 -0.5279 0.1476 -0.6004 0.1253 -0.6729 0.1053 -0.7455 0.0877 -0.8180 0.0723 -0.8905 0.0590 -0.9630 0.0477 -1.0356 0.0382 -1.1081 0.0303 -1.1806 0.0238 -1.2531 0.0185 -1.3257 0.0143 -1.3982 0.0109 -1.4707 0.0082 -1.5432 0.0061 -1.6158 0.0046 -1.6883 0.0033 -1.7608 0.0024 -1.8333 0.0017 -1.9059 0.0012 -1.9784 0.0009 -2.0509 0.0006 -2.1234 0.0004 -2.1959 0.0003 -2.2685 0.0002 -2.3410 0.0001 -2.4135 0.0001 -2.4860 0.0001 -2.5586 0.0000 -2.6311 0.0000 -2.7036 0.0000 -2.7761 0.0000 -2.8487 0.0000 -2.9212 0.0000 -2.9937 0.0000 -3.0662 0.0000 -3.1388 0.0000 -3.2113 0.0000 -3.2838 0.0000 -3.3563 0.0000 -3.4289 0.0000 -3.5014 0.0000 -3.5739 0.0000 -3.6464 0.0000 -3.7190 0.0000 -3.7915 0.0000 -3.8640 0.0000 -3.9365 0.0000 -4.0091 0.0000 -4.0816 0.0000 -Irf7 1 -250 150 -2 4 12 -0 --3.9154 0.0000 --3.8440 0.0000 --3.7726 0.0000 --3.7012 0.0000 --3.6298 0.0000 --3.5583 0.0000 --3.4869 0.0001 --3.4155 0.0001 --3.3441 0.0002 --3.2727 0.0003 --3.2013 0.0004 --3.1299 0.0006 --3.0585 0.0009 --2.9871 0.0014 --2.9157 0.0020 --2.8443 0.0030 --2.7729 0.0043 --2.7015 0.0060 --2.6301 0.0085 --2.5587 0.0117 --2.4873 0.0160 --2.4159 0.0216 --2.3445 0.0288 --2.2730 0.0378 --2.2016 0.0491 --2.1302 0.0630 --2.0588 0.0797 --1.9874 0.0997 --1.9160 0.1230 --1.8446 0.1499 --1.7732 0.1803 --1.7018 0.2142 --1.6304 0.2513 --1.5590 0.2910 --1.4876 0.3327 --1.4162 0.3755 --1.3448 0.4186 --1.2734 0.4607 --1.2020 0.5005 --1.1306 0.5370 --1.0592 0.5688 --0.9878 0.5949 --0.9163 0.6143 --0.8449 0.6263 --0.7735 0.6305 --0.7021 0.6266 --0.6307 0.6149 --0.5593 0.5958 --0.4879 0.5700 --0.4165 0.5384 --0.3451 0.5021 --0.2737 0.4623 --0.2023 0.4203 --0.1309 0.3773 --0.0595 0.3344 -0.0119 0.2926 -0.0833 0.2528 -0.1547 0.2157 -0.2261 0.1817 -0.2975 0.1511 -0.3690 0.1240 -0.4404 0.1006 -0.5118 0.0805 -0.5832 0.0636 -0.6546 0.0496 -0.7260 0.0382 -0.7974 0.0291 -0.8688 0.0219 -0.9402 0.0162 -1.0116 0.0119 -1.0830 0.0086 -1.1544 0.0061 -1.2258 0.0043 -1.2972 0.0030 -1.3686 0.0021 -1.4400 0.0014 -1.5114 0.0009 -1.5828 0.0006 -1.6543 0.0004 -1.7257 0.0003 -1.7971 0.0002 -1.8685 0.0001 -1.9399 0.0001 -2.0113 0.0000 -2.0827 0.0000 -2.1541 0.0000 -2.2255 0.0000 -2.2969 0.0000 -2.3683 0.0000 -2.4397 0.0000 -2.5111 0.0000 -2.5825 0.0000 -2.6539 0.0000 -2.7253 0.0000 -2.7967 0.0000 -2.8681 0.0000 -2.9396 0.0000 -3.0110 0.0000 -3.0824 0.0000 -3.1538 0.0000 -3.2252 0.0000 diff --git a/sourcecodes/data/Swznlevels.txt b/sourcecodes/data/Swznlevels.txt deleted file mode 100644 index 605579c3..00000000 --- a/sourcecodes/data/Swznlevels.txt +++ /dev/null @@ -1,2 +0,0 @@ -rs3664317 1 2 - diff --git a/sourcecodes/data/Swznnode.txt b/sourcecodes/data/Swznnode.txt deleted file mode 100644 index 8351c193..00000000 --- a/sourcecodes/data/Swznnode.txt +++ /dev/null @@ -1 +0,0 @@ -14 diff --git a/sourcecodes/data/Swznrows.txt b/sourcecodes/data/Swznrows.txt deleted file mode 100644 index fff0a247..00000000 --- a/sourcecodes/data/Swznrows.txt +++ /dev/null @@ -1 +0,0 @@ -74 diff --git a/sourcecodes/data/Swzparent.txt b/sourcecodes/data/Swzparent.txt deleted file mode 100644 index b8626c4c..00000000 --- a/sourcecodes/data/Swzparent.txt +++ /dev/null @@ -1 +0,0 @@ -4 diff --git a/sourcecodes/data/Swzstructure_input.txt b/sourcecodes/data/Swzstructure_input.txt deleted file mode 100644 index 48837c69..00000000 --- a/sourcecodes/data/Swzstructure_input.txt +++ /dev/null @@ -1,15 +0,0 @@ -rs3664317 Oas1a Parp9 Dhx58 Cd1d1 Irf7 Oas3 Pml Mx1 Ifit1 Trim25 Oas1g Pglyrp3 Ifih1 -0 0 0 1 1 0 0 0 0 1 0 1 0 1 -0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 1 0 0 0 0 0 0 0 0 0 0 0 0 -0 0 0 0 0 1 0 0 1 1 1 1 0 0 -0 0 0 0 0 0 1 0 0 0 1 0 1 0 -0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 0 0 0 0 0 0 0 0 0 0 0 1 0 -0 0 0 0 0 0 1 0 0 0 0 0 1 0 -0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 0 0 0 0 1 0 0 1 0 0 0 0 0 -0 0 1 0 0 0 0 1 0 0 0 0 1 0 -0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 0 1 1 1 0 1 0 0 1 1 0 0 0 diff --git a/sourcecodes/data/Swzstructure_input_new.txt b/sourcecodes/data/Swzstructure_input_new.txt deleted file mode 100644 index 52ac8617..00000000 --- a/sourcecodes/data/Swzstructure_input_new.txt +++ /dev/null @@ -1,16 +0,0 @@ -rs3664317 Oas1a Parp9 Dhx58 Cd1d1 Irf7 Oas3 Pml Mx1 Ifit1 Trim25 Oas1g Pglyrp3 Ifih1 -0 0 0 1 1 0 0 0 0 1 0 1 0 1 0 -0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 0 0 0 0 1 0 0 1 1 0 1 0 0 0 -0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 -0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 -0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 -0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 -0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 -0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 0 1 1 1 0 1 0 0 1 0 0 0 0 0 -0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 diff --git a/sourcecodes/data/Swzstructure_input_temp.txt b/sourcecodes/data/Swzstructure_input_temp.txt deleted file mode 100644 index f3589770..00000000 --- a/sourcecodes/data/Swzstructure_input_temp.txt +++ /dev/null @@ -1,15 +0,0 @@ -rs3664317 Oas1a Parp9 Dhx58 Cd1d1 Irf7 Oas3 Pml Mx1 Ifit1 Trim25 Oas1g Pglyrp3 Ifih1 -0.000000 0.808614 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.250558 1.000000 0.000000 0.960922 0.000000 1.000000 -0.000000 0.000000 0.000000 0.000000 0.000000 0.596398 0.000000 0.786929 0.055837 0.000000 0.000000 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0.000000 0.000000 0.000000 0.000000 0.000000 -0.000000 0.526176 1.000000 0.000000 0.000000 0.036744 0.000000 1.000000 0.269815 0.000000 0.000000 0.000000 1.000000 0.000000 -0.000000 0.000000 0.000000 0.000000 0.000000 0.750185 0.000000 0.622177 0.636861 0.590731 0.000000 0.000000 0.000000 0.000000 -0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 -0.000000 0.360110 1.000000 1.000000 1.000000 0.018780 1.000000 0.000000 0.000000 1.000000 1.000000 0.348314 0.000000 0.000000 diff --git a/sourcecodes/data/Swzstructure_old.txt b/sourcecodes/data/Swzstructure_old.txt deleted file mode 100644 index f0815c7a..00000000 --- a/sourcecodes/data/Swzstructure_old.txt +++ /dev/null @@ -1,14 +0,0 @@ -rs3664317 0.5479 0.4521 -Dhx58 0.0024 0.0029 0.0035 0.0043 0.0053 0.0064 0.0076 0.0092 0.0110 0.0130 0.0154 0.0182 0.0213 0.0249 0.0290 0.0336 0.0388 0.0446 0.0510 0.0581 0.0659 0.0745 0.0838 0.0938 0.1046 0.1162 0.1284 0.1414 0.1550 0.1692 0.1839 0.1990 0.2145 0.2302 0.2459 0.2617 0.2772 0.2924 0.3071 0.3212 0.3346 0.3469 0.3582 0.3683 0.3771 0.3844 0.3902 0.3944 0.3970 0.3978 0.3970 0.3944 0.3902 0.3845 0.3771 0.3684 0.3583 0.3470 0.3346 0.3213 0.3072 0.2925 0.2773 0.2617 0.2460 0.2302 0.2146 0.1991 0.1840 0.1693 0.1551 0.1415 0.1285 0.1162 0.1047 0.0939 0.0838 0.0745 0.0660 0.0582 0.0510 0.0446 0.0388 0.0337 0.0290 0.0250 0.0213 0.0182 0.0154 0.0130 0.0110 0.0092 0.0077 0.0064 0.0053 0.0043 0.0035 0.0029 0.0024 0.0019 0.0015 -Cd1d1 0.0010 0.0012 0.0015 0.0019 0.0023 0.0029 0.0035 0.0043 0.0052 0.0064 0.0077 0.0092 0.0110 0.0131 0.0156 0.0184 0.0216 0.0253 0.0295 0.0342 0.0395 0.0455 0.0521 0.0594 0.0674 0.0762 0.0857 0.0960 0.1072 0.1190 0.1316 0.1449 0.1589 0.1734 0.1885 0.2039 0.2197 0.2357 0.2517 0.2677 0.2834 0.2987 0.3135 0.3276 0.3408 0.3530 0.3641 0.3739 0.3823 0.3891 0.3944 0.3980 0.3999 0.4000 0.3984 0.3951 0.3901 0.3835 0.3753 0.3658 0.3549 0.3428 0.3297 0.3158 0.3011 0.2858 0.2702 0.2543 0.2382 0.2223 0.2064 0.1909 0.1758 0.1612 0.1471 0.1337 0.1210 0.1090 0.0978 0.0873 0.0776 0.0687 0.0606 0.0532 0.0465 0.0404 0.0350 0.0302 0.0259 0.0222 0.0189 0.0160 0.0135 0.0113 0.0095 0.0079 0.0066 0.0054 0.0044 0.0036 0.0030 -Ifit1 0.0063 0.0075 0.0089 0.0105 0.0124 0.0145 0.0169 0.0197 0.0228 0.0264 0.0303 0.0347 0.0397 0.0451 0.0511 0.0577 0.0649 0.0728 0.0812 0.0904 0.1002 0.1106 0.1217 0.1333 0.1456 0.1584 0.1717 0.1854 0.1995 0.2138 0.2284 0.2430 0.2576 0.2720 0.2862 0.3001 0.3134 0.3261 0.3381 0.3492 0.3593 0.3684 0.3763 0.3830 0.3883 0.3922 0.3948 0.3958 0.3954 0.3936 0.3902 0.3855 0.3795 0.3721 0.3635 0.3539 0.3432 0.3316 0.3192 0.3061 0.2925 0.2784 0.2641 0.2495 0.2349 0.2203 0.2059 0.1917 0.1778 0.1643 0.1513 0.1388 0.1268 0.1155 0.1047 0.0947 0.0852 0.0765 0.0683 0.0609 0.0540 0.0477 0.0420 0.0369 0.0322 0.0281 0.0244 0.0211 0.0181 0.0156 0.0133 0.0113 0.0096 0.0081 0.0068 0.0057 0.0048 0.0040 0.0033 0.0027 0.0023 -Oas1g 0.0009 0.0011 0.0014 0.0018 0.0022 0.0028 0.0034 0.0042 0.0052 0.0063 0.0076 0.0092 0.0111 0.0133 0.0158 0.0187 0.0221 0.0260 0.0304 0.0353 0.0409 0.0472 0.0542 0.0619 0.0704 0.0797 0.0899 0.1008 0.1125 0.1251 0.1383 0.1523 0.1670 0.1822 0.1978 0.2138 0.2300 0.2464 0.2626 0.2787 0.2943 0.3094 0.3238 0.3373 0.3497 0.3609 0.3707 0.3791 0.3858 0.3909 0.3942 0.3956 0.3953 0.3931 0.3891 0.3834 0.3761 0.3672 0.3568 0.3451 0.3323 0.3184 0.3038 0.2884 0.2726 0.2565 0.2401 0.2238 0.2077 0.1918 0.1763 0.1613 0.1469 0.1332 0.1202 0.1080 0.0965 0.0859 0.0761 0.0671 0.0589 0.0514 0.0447 0.0387 0.0334 0.0286 0.0244 0.0208 0.0176 0.0148 0.0124 0.0103 0.0086 0.0071 0.0058 0.0048 0.0039 0.0032 0.0025 0.0020 0.0016 -Ifih1 0.0023 0.0028 0.0034 0.0041 0.0050 0.0060 0.0071 0.0085 0.0101 0.0119 0.0140 0.0164 0.0192 0.0223 0.0259 0.0299 0.0343 0.0393 0.0449 0.0510 0.0578 0.0652 0.0733 0.0820 0.0914 0.1015 0.1124 0.1238 0.1359 0.1487 0.1620 0.1758 0.1900 0.2046 0.2195 0.2345 0.2496 0.2647 0.2795 0.2941 0.3082 0.3218 0.3347 0.3467 0.3578 0.3678 0.3766 0.3842 0.3903 0.3951 0.3984 0.4001 0.4003 0.3990 0.3961 0.3917 0.3859 0.3787 0.3702 0.3605 0.3497 0.3379 0.3252 0.3118 0.2978 0.2834 0.2685 0.2535 0.2384 0.2234 0.2084 0.1938 0.1794 0.1655 0.1521 0.1392 0.1269 0.1153 0.1043 0.0940 0.0844 0.0755 0.0672 0.0597 0.0527 0.0464 0.0407 0.0356 0.0310 0.0269 0.0232 0.0200 0.0171 0.0146 0.0124 0.0105 0.0089 0.0075 0.0063 0.0052 0.0043 -Parp9 0.0080 0.0094 0.0111 0.0130 0.0152 0.0177 0.0205 0.0237 0.0272 0.0312 0.0357 0.0406 0.0461 0.0521 0.0587 0.0659 0.0737 0.0821 0.0912 0.1009 0.1112 0.1222 0.1337 0.1458 0.1585 0.1716 0.1851 0.1990 0.2132 0.2276 0.2420 0.2565 0.2709 0.2850 0.2988 0.3121 0.3249 0.3369 0.3482 0.3586 0.3679 0.3761 0.3832 0.3889 0.3934 0.3964 0.3981 0.3983 0.3971 0.3945 0.3905 0.3851 0.3785 0.3706 0.3617 0.3516 0.3406 0.3288 0.3163 0.3031 0.2894 0.2754 0.2611 0.2467 0.2322 0.2178 0.2035 0.1895 0.1759 0.1626 0.1498 0.1375 0.1258 0.1146 0.1041 0.0942 0.0849 0.0763 0.0683 0.0609 0.0541 0.0480 0.0423 0.0372 0.0326 0.0285 0.0247 0.0214 0.0185 0.0159 0.0137 0.0117 0.0099 0.0084 0.0071 0.0060 0.0050 0.0042 0.0035 0.0029 0.0024 -Oas1a 0.0034 0.0042 0.0051 0.0061 0.0073 0.0087 0.0104 0.0124 0.0146 0.0172 0.0201 0.0235 0.0273 0.0316 0.0364 0.0417 0.0477 0.0543 0.0616 0.0695 0.0782 0.0876 0.0977 0.1085 0.1201 0.1323 0.1452 0.1586 0.1727 0.1871 0.2020 0.2172 0.2325 0.2479 0.2633 0.2785 0.2933 0.3077 0.3214 0.3344 0.3465 0.3576 0.3675 0.3761 0.3834 0.3892 0.3935 0.3963 0.3974 0.3969 0.3947 0.3910 0.3857 0.3790 0.3708 0.3613 0.3507 0.3389 0.3263 0.3128 0.2986 0.2839 0.2689 0.2536 0.2382 0.2228 0.2075 0.1925 0.1779 0.1637 0.1500 0.1369 0.1245 0.1127 0.1016 0.0912 0.0816 0.0726 0.0644 0.0569 0.0501 0.0439 0.0383 0.0332 0.0288 0.0248 0.0213 0.0182 0.0155 0.0131 0.0111 0.0093 0.0078 0.0065 0.0054 0.0045 0.0037 0.0030 0.0025 0.0020 0.0016 -Irf7 0.0002 0.0003 0.0004 0.0005 0.0006 0.0008 0.0010 0.0013 0.0016 0.0021 0.0026 0.0033 0.0040 0.0050 0.0061 0.0075 0.0091 0.0111 0.0133 0.0160 0.0191 0.0226 0.0267 0.0314 0.0367 0.0428 0.0495 0.0570 0.0654 0.0746 0.0846 0.0956 0.1074 0.1201 0.1336 0.1478 0.1628 0.1784 0.1946 0.2111 0.2279 0.2448 0.2617 0.2783 0.2946 0.3102 0.3250 0.3388 0.3514 0.3627 0.3725 0.3806 0.3870 0.3916 0.3942 0.3948 0.3935 0.3903 0.3851 0.3781 0.3694 0.3591 0.3473 0.3343 0.3201 0.3050 0.2892 0.2728 0.2561 0.2392 0.2223 0.2056 0.1891 0.1732 0.1577 0.1430 0.1290 0.1157 0.1033 0.0918 0.0812 0.0714 0.0625 0.0544 0.0472 0.0407 0.0349 0.0298 0.0253 0.0214 0.0180 0.0151 0.0125 0.0104 0.0086 0.0070 0.0057 0.0047 0.0038 0.0030 0.0024 -Mx1 0.0028 0.0035 0.0043 0.0053 0.0066 0.0081 0.0098 0.0119 0.0144 0.0173 0.0207 0.0246 0.0291 0.0342 0.0400 0.0465 0.0539 0.0621 0.0711 0.0811 0.0919 0.1037 0.1164 0.1300 0.1444 0.1595 0.1754 0.1918 0.2086 0.2258 0.2431 0.2604 0.2775 0.2941 0.3102 0.3254 0.3396 0.3526 0.3641 0.3742 0.3824 0.3889 0.3934 0.3959 0.3964 0.3948 0.3911 0.3855 0.3780 0.3688 0.3579 0.3455 0.3318 0.3170 0.3013 0.2849 0.2680 0.2508 0.2335 0.2162 0.1992 0.1826 0.1665 0.1510 0.1363 0.1223 0.1092 0.0970 0.0858 0.0754 0.0660 0.0574 0.0497 0.0428 0.0367 0.0312 0.0265 0.0223 0.0187 0.0156 0.0130 0.0107 0.0088 0.0072 0.0059 0.0047 0.0038 0.0031 0.0024 0.0019 0.0015 0.0012 0.0009 0.0007 0.0006 0.0004 0.0003 0.0002 0.0002 0.0001 0.0001 -Trim25 0.0009 0.0012 0.0014 0.0018 0.0022 0.0026 0.0032 0.0039 0.0047 0.0056 0.0068 0.0081 0.0096 0.0113 0.0133 0.0156 0.0183 0.0213 0.0247 0.0286 0.0329 0.0377 0.0431 0.0490 0.0556 0.0628 0.0706 0.0791 0.0883 0.0982 0.1087 0.1200 0.1319 0.1444 0.1575 0.1711 0.1851 0.1996 0.2144 0.2293 0.2444 0.2594 0.2743 0.2889 0.3031 0.3168 0.3299 0.3422 0.3535 0.3638 0.3730 0.3809 0.3875 0.3927 0.3964 0.3987 0.3993 0.3985 0.3961 0.3922 0.3868 0.3801 0.3720 0.3627 0.3522 0.3408 0.3284 0.3153 0.3015 0.2872 0.2725 0.2576 0.2426 0.2275 0.2126 0.1979 0.1835 0.1695 0.1559 0.1429 0.1304 0.1186 0.1075 0.0970 0.0872 0.0781 0.0696 0.0619 0.0548 0.0483 0.0424 0.0371 0.0323 0.0281 0.0243 0.0209 0.0180 0.0153 0.0131 0.0111 0.0094 -Oas3 0.0017 0.0021 0.0026 0.0032 0.0039 0.0048 0.0059 0.0072 0.0087 0.0104 0.0125 0.0149 0.0177 0.0209 0.0246 0.0289 0.0337 0.0391 0.0452 0.0520 0.0595 0.0679 0.0771 0.0871 0.0980 0.1098 0.1224 0.1358 0.1501 0.1651 0.1808 0.1971 0.2139 0.2311 0.2486 0.2662 0.2837 0.3011 0.3181 0.3345 0.3502 0.3650 0.3787 0.3911 0.4021 0.4116 0.4195 0.4255 0.4297 0.4320 0.4324 0.4308 0.4273 0.4220 0.4148 0.4059 0.3954 0.3835 0.3702 0.3558 0.3405 0.3243 0.3075 0.2903 0.2728 0.2552 0.2377 0.2204 0.2034 0.1869 0.1709 0.1557 0.1411 0.1273 0.1144 0.1023 0.0911 0.0807 0.0712 0.0626 0.0547 0.0476 0.0413 0.0356 0.0306 0.0262 0.0223 0.0189 0.0159 0.0134 0.0112 0.0093 0.0077 0.0064 0.0052 0.0043 0.0035 0.0028 0.0023 0.0018 0.0015 -Pglyrp3 0.0011 0.0014 0.0017 0.0021 0.0026 0.0032 0.0039 0.0047 0.0057 0.0069 0.0083 0.0100 0.0119 0.0141 0.0166 0.0196 0.0229 0.0267 0.0310 0.0359 0.0413 0.0474 0.0541 0.0614 0.0695 0.0783 0.0878 0.0981 0.1091 0.1208 0.1332 0.1462 0.1598 0.1739 0.1885 0.2034 0.2185 0.2337 0.2490 0.2640 0.2788 0.2931 0.3069 0.3199 0.3320 0.3431 0.3530 0.3617 0.3690 0.3748 0.3790 0.3817 0.3827 0.3821 0.3798 0.3759 0.3705 0.3635 0.3552 0.3455 0.3347 0.3228 0.3100 0.2964 0.2822 0.2675 0.2525 0.2373 0.2220 0.2069 0.1919 0.1773 0.1631 0.1493 0.1362 0.1236 0.1118 0.1006 0.0902 0.0804 0.0715 0.0632 0.0557 0.0489 0.0427 0.0371 0.0321 0.0277 0.0238 0.0203 0.0173 0.0147 0.0124 0.0104 0.0087 0.0072 0.0060 0.0050 0.0041 0.0033 0.0027 -Pml 0.0001 0.0001 0.0002 0.0002 0.0003 0.0004 0.0005 0.0006 0.0008 0.0010 0.0013 0.0016 0.0020 0.0026 0.0032 0.0040 0.0049 0.0060 0.0073 0.0089 0.0107 0.0129 0.0154 0.0184 0.0218 0.0257 0.0302 0.0353 0.0411 0.0476 0.0548 0.0628 0.0716 0.0813 0.0918 0.1032 0.1155 0.1285 0.1424 0.1570 0.1722 0.1880 0.2043 0.2209 0.2377 0.2546 0.2713 0.2877 0.3036 0.3188 0.3332 0.3466 0.3587 0.3695 0.3787 0.3863 0.3922 0.3962 0.3983 0.3985 0.3967 0.3930 0.3875 0.3802 0.3713 0.3608 0.3489 0.3357 0.3215 0.3064 0.2906 0.2743 0.2576 0.2408 0.2240 0.2073 0.1910 0.1751 0.1597 0.1450 0.1310 0.1178 0.1054 0.0938 0.0831 0.0733 0.0643 0.0562 0.0488 0.0422 0.0363 0.0311 0.0265 0.0225 0.0190 0.0159 0.0133 0.0111 0.0092 0.0076 0.0062 diff --git a/sourcecodes/data/Swzthr.txt b/sourcecodes/data/Swzthr.txt deleted file mode 100644 index b63ba696..00000000 --- a/sourcecodes/data/Swzthr.txt +++ /dev/null @@ -1 +0,0 @@ -0.9 diff --git a/sourcecodes/data/Swztier.txt b/sourcecodes/data/Swztier.txt deleted file mode 100644 index e71cfdda..00000000 --- a/sourcecodes/data/Swztier.txt +++ /dev/null @@ -1 +0,0 @@ -3,Tier1,1,rs3664317,Tier2,1,Ifih1,Tier3,12,Oas1a,Parp9,Dhx58,Cd1d1,Irf7,Oas3,Pml,Mx1,Ifit1,Trim25,Oas1g,Pglyrp3, \ No newline at end of file diff --git a/sourcecodes/data/Swztype.txt b/sourcecodes/data/Swztype.txt deleted file mode 100644 index 1b707710..00000000 --- a/sourcecodes/data/Swztype.txt +++ /dev/null @@ -1,2 +0,0 @@ -rs3664317 Oas1a Parp9 Dhx58 Cd1d1 Irf7 Oas3 Pml Mx1 Ifit1 Trim25 Oas1g Pglyrp3 Ifih1 -2 1 1 1 1 1 1 1 1 1 1 1 1 1 diff --git a/sourcecodes/data/Swzvar.txt b/sourcecodes/data/Swzvar.txt deleted file mode 100644 index 73bc1323..00000000 --- a/sourcecodes/data/Swzvar.txt +++ /dev/null @@ -1 +0,0 @@ -1 6 \ No newline at end of file diff --git a/sourcecodes/data/Swzvardata.txt b/sourcecodes/data/Swzvardata.txt deleted file mode 100644 index 1874ec81..00000000 --- a/sourcecodes/data/Swzvardata.txt +++ /dev/null @@ -1 +0,0 @@ -1 -1.444562060943 \ No newline at end of file diff --git a/sourcecodes/data/Swzvarname.txt b/sourcecodes/data/Swzvarname.txt deleted file mode 100644 index 5ed21c88..00000000 --- a/sourcecodes/data/Swzvarname.txt +++ /dev/null @@ -1 +0,0 @@ -rs3664317 Trim25 \ No newline at end of file diff --git a/sourcecodes/data/Swzwhite.txt b/sourcecodes/data/Swzwhite.txt deleted file mode 100644 index 83e81b8b..00000000 --- a/sourcecodes/data/Swzwhite.txt +++ /dev/null @@ -1 +0,0 @@ -From To diff --git a/sourcecodes/data/evidencemodified b/sourcecodes/data/evidencemodified deleted file mode 100644 index 9b3f7563..00000000 Binary files a/sourcecodes/data/evidencemodified and /dev/null differ diff --git a/sourcecodes/data/initialstructure b/sourcecodes/data/initialstructure deleted file mode 100644 index 9ecf1bc7..00000000 Binary files a/sourcecodes/data/initialstructure and /dev/null differ diff --git a/sourcecodes/data/newintervention b/sourcecodes/data/newintervention deleted file mode 100644 index d818a943..00000000 Binary files a/sourcecodes/data/newintervention and /dev/null differ diff --git a/sourcecodes/data/standardized_data.txt b/sourcecodes/data/standardized_data.txt deleted file mode 100644 index ac8c5aaf..00000000 --- a/sourcecodes/data/standardized_data.txt +++ /dev/null @@ -1,201 +0,0 @@ -Trait5 Geno2 Trait6 Trait3 Geno1 Trait2 Trait4 Trait1 -1.8453 1 -0.70749 -1.3361 1 1.5443 -0.43784 0.72817 -0.9605 2 0.85158 1.5164 2 -1.1632 1.0263 -0.11444 --0.63336 2 0.53936 1.1602 2 -0.74229 1.4011 -1.5418 -1.3355 1 -1.7216 -0.76715 2 0.12195 -0.66179 0.098918 -0.36111 1 -0.74876 -0.98283 2 -2.0753 -1.2335 -0.99306 --1.177 2 0.51257 0.84261 2 0.065663 1.2658 -0.64706 -0.076305 2 1.5888 1.7606 2 -0.66331 1.4736 0.39036 --0.53841 1 0.11031 -1.5038 2 0.23456 -0.060179 0.14069 --0.59968 2 0.48834 1.0431 2 -0.59377 0.22579 -0.99995 -0.37839 2 1.293 0.49142 2 -1.2855 0.37537 0.50769 --0.98262 2 1.6051 0.57702 1 0.44497 0.92494 1.9399 --0.32154 2 1.0249 0.77512 2 -0.62075 0.32547 1.8131 -0.094471 2 1.0318 1.5671 1 -0.60413 0.75183 -1.4871 --0.2677 1 -1.3762 -0.039045 1 0.61004 -0.20296 -0.34358 -1.45 1 0.22686 -0.18131 2 -0.5462 -0.61255 -0.83466 --0.94296 1 -1.0223 -1.1896 2 -0.4021 -1.2644 -1.2829 --0.65504 1 -2.6825 -1.035 2 0.25776 -1.4615 0.8459 -1.3635 2 1.5647 0.59499 1 1.372 1.0621 0.74488 -0.60321 2 0.68692 1.4714 1 0.81867 1.711 0.90076 --0.5142 1 -1.0962 -1.5522 2 -0.04535 -1.2401 -0.62324 --1.2303 2 0.82027 1.0532 1 -0.12811 1.344 0.60502 -0.84008 1 -0.7159 -0.44987 2 -0.56344 -1.5572 1.0854 -0.47761 2 1.5622 1.2168 2 -0.30596 1.1251 -1.373 --1.3546 1 -0.7484 -0.096654 2 0.03293 0.23078 0.81596 --0.32954 1 -1.6183 -0.57119 2 -0.9399 -1.5734 -0.76397 -0.57841 2 0.24378 0.681 2 -0.7778 1.305 0.77764 -0.11524 1 -0.85367 0.35424 1 2.3096 0.75697 1.7574 -1.1463 1 0.0096586 -0.25741 2 -0.52081 -1.5513 0.645 --1.3926 1 -0.88863 -0.68795 1 0.0060478 -0.43763 0.97176 --0.34841 2 1.0004 0.23941 2 -0.83161 0.87503 -0.88976 -0.79176 2 0.59541 1.0092 2 -1.9591 0.77295 0.31236 --1.7691 1 0.055429 -1.1837 1 1.1172 -0.091192 1.3242 -0.23812 1 -0.13588 -0.98943 2 -0.041159 -0.43704 -0.39798 -1.4262 2 0.46298 1.327 2 0.15808 1.1741 -0.073986 -1.3584 2 1.5511 0.49802 2 -0.96618 -0.037384 0.26962 --0.45407 1 -0.11918 -0.20984 2 -0.84764 0.68704 0.15697 -1.3502 2 1.1228 1.7003 2 -0.34181 1.3601 0.19833 -0.51265 1 0.059243 -0.61724 2 -1.2675 -1.2719 -1.5491 -1.6144 1 -1.6767 -0.4403 1 -0.7614 0.046076 -0.67463 --0.99883 1 -0.76648 0.33667 1 0.97148 -1.1389 -0.1179 -0.24789 2 0.4729 1.0484 2 -0.62124 0.34555 -0.089509 -1.6957 1 0.014711 -1.3474 2 -0.026706 -1.4606 -1.4344 --0.54533 2 0.88108 1.3793 2 -0.29202 1.3706 -1.1715 --1.7381 2 0.16189 0.96739 2 -0.77438 0.96572 1.2346 --0.844 1 -1.0713 -0.50552 1 1.1809 -0.13536 3.0986 --1.8946 2 0.83747 0.55294 2 0.21042 0.78685 -0.41598 --1.2313 2 0.77672 1.7131 2 -0.38666 1.694 -0.79748 --0.7674 1 -1.151 -0.091205 2 0.9644 -0.57897 0.21363 -0.72057 1 -0.34897 -0.95934 2 -1.3832 -0.57841 -0.10753 -1.2095 1 0.5788 -0.77644 1 0.86817 -0.56945 0.13453 -0.09126 2 1.0274 0.59902 2 0.094442 0.30723 1.2562 --1.7398 2 0.67041 0.82202 2 -0.30164 0.94827 -0.94319 --0.66818 2 0.49087 1.2694 2 -0.18615 0.78217 -1.3246 --0.2258 1 -1.4193 -1.44 2 -1.5421 -1.6216 -0.34894 -1.4939 1 0.12307 -0.97417 1 -1.9058 -1.6405 -2.6656 -0.59683 1 -0.27561 -1.5921 2 -0.012339 -1.033 0.22491 -0.32502 2 1.8115 0.59888 2 -0.78178 0.37072 -1.5605 -0.33627 1 -0.54037 -0.092937 2 -0.23801 -0.28432 0.25603 --0.71947 1 -0.96292 -0.87226 1 1.0454 -1.1866 -1.1159 -0.7723 1 -0.74389 -0.31293 1 0.56738 -1.597 0.21894 -1.1117 2 0.22881 0.53378 2 0.28362 0.62928 -0.5678 --0.37072 2 1.1896 1.2033 1 1.7889 1.9867 -1.137 -1.9537 1 -1.2797 -1.1399 2 -0.45995 -1.6282 -0.33916 --1.1043 2 1.0871 2.3039 1 -0.27611 0.615 0.27212 --1.3202 2 0.86019 1.2914 1 0.27461 0.94779 -0.83604 --0.46478 2 1.29 0.43419 2 0.6874 1.6104 -0.36625 --1.1858 1 -1.2069 -0.56475 2 0.18024 -0.54017 0.23692 -0.32802 2 0.87458 1.8613 1 0.40544 1.1088 1.7578 -1.1735 1 -0.66747 -1.6202 2 0.53589 -0.9149 0.45194 --1.16 2 1.0838 0.61868 1 0.72867 1.3378 0.26446 -1.462 1 0.19509 -1.4192 2 0.56635 -0.85302 0.33349 -1.0695 2 0.21919 1.322 1 1.3441 1.1727 0.75993 --0.22703 2 1.1363 0.54703 2 -0.48891 1.2236 -0.91703 -1.3458 1 -0.6068 -1.7825 2 -0.68775 -0.89217 0.99687 --0.091249 2 0.68469 0.60839 2 -0.6527 0.58896 -0.24057 -0.67203 2 0.72395 1.1051 2 -1.4197 0.29802 0.18773 -0.34537 2 1.2845 1.4258 2 -0.6173 1.0233 -0.24272 --1.0761 1 -1.2815 -0.94371 2 -1.4633 -0.69107 -0.87208 --0.20711 2 1.0174 0.69566 2 -0.58432 0.15352 -0.49392 -0.59929 2 1.5069 1.8419 2 -1.4583 -0.031663 0.0051904 --0.11492 2 1.2367 1.2191 2 -0.51421 1.1523 1.8842 -1.2751 1 -0.52411 -0.64346 1 2.0614 -0.0023541 -0.78047 -0.90981 2 1.1284 1.2152 1 2.6756 1.2409 -0.0088196 --1.9542 1 -1.221 -1.4163 1 1.2826 -0.010965 1.0953 -1.7193 2 0.30492 1.2836 1 0.61499 0.56464 0.15416 --0.53199 2 0.23732 0.77552 2 -1.2032 -0.66655 0.098147 -0.036699 1 -1.0483 -1.779 2 0.3525 -0.60395 0.29999 --0.64389 2 -0.082056 0.48348 2 -0.86546 -0.4081 -0.099655 -0.7892 1 0.063117 -0.73251 2 -0.64062 -0.4066 0.12407 --0.92679 1 -1.4966 0.012855 2 0.79099 -0.55856 0.1923 -0.75147 2 0.0035339 0.026413 2 -0.50794 0.29651 -0.27805 -0.21172 1 -1.3492 -0.47335 2 0.23233 -0.70213 -1.863 --0.97409 1 -0.629 -0.4728 2 0.091744 -0.086481 -0.49562 --1.0464 1 -1.6692 -0.8497 1 1.5077 0.095689 1.3064 --0.078054 2 1.7703 0.87897 1 1.6091 1.3305 -0.65244 -1.6149 1 -0.75709 -0.63085 2 -0.77532 -2.2636 -0.59726 --1.1678 2 0.0899 0.58095 1 -0.22151 0.26068 0.51603 --0.098842 1 -0.30237 -0.04093 2 -1.2385 -0.37569 -1.8225 --0.55001 1 -1.0301 -1.7087 1 2.6454 -1.328 0.34932 -1.0482 1 -0.26461 -1.3201 1 1.68 -0.0041651 -0.12149 -0.5008 1 -0.85959 -0.66514 2 -1.6141 0.29161 -0.89114 -0.309 2 1.0744 1.269 2 -0.96467 1.5905 -1.4207 --0.03887 2 1.0667 1.0095 2 -0.089407 0.99929 1.1521 --0.50172 1 -0.99479 -0.54327 1 -0.16208 -1.0551 0.47458 --0.094959 2 2.17 1.7212 1 0.51568 0.53768 -1.2646 --0.5209 1 -1.431 -0.70798 2 -0.4217 0.23091 0.57754 -0.6976 1 -1.2512 -0.50443 2 0.40922 -1.2722 -0.2292 --0.15737 1 -1.3037 -1.2446 2 -0.25 -1.3128 -0.48314 -1.7004 1 -0.093222 0.18072 2 -0.77286 -1.1751 0.70345 --0.34711 1 -0.40996 -0.38877 2 -0.74126 -0.076517 0.71528 -0.63301 1 -1.3066 -1.061 2 -0.020245 -0.47474 0.22126 -0.45593 2 0.98475 1.1245 2 -1.5284 0.87162 -1.1122 --0.074398 1 0.086143 -0.71909 2 -0.72312 -0.58633 -0.1192 -0.5737 2 1.3999 0.41267 2 0.14453 0.30696 0.39156 -0.50652 1 -0.76797 -0.93352 2 -0.537 -0.41761 0.072314 --1.6019 1 0.65979 -0.97526 2 0.28122 -0.88937 0.46691 -0.74414 2 1.6353 1.382 2 0.099487 1.2686 1.3096 --1.3504 1 -1.1309 -0.53372 1 0.13853 -1.3604 1.3258 --0.32328 1 -1.4115 -0.55521 2 -0.39333 -0.7941 1.0533 --0.74323 2 1.7072 0.49329 2 -0.87786 0.48373 -1.3418 -0.8876 1 -1.0691 -0.47533 2 -0.65919 -1.2867 1.3564 --0.26121 2 1.3665 1.3315 1 0.59812 1.5342 -0.51234 --0.52176 2 1.5091 0.71759 2 -0.79433 0.67907 -0.77323 --0.51351 1 -0.99866 -0.96005 1 -0.064251 -0.82275 1.8511 --0.17328 1 0.54034 -1.7709 2 0.38529 -1.362 0.67177 -0.15516 2 1.1328 -0.19576 2 -1.135 1.0527 0.29149 -0.45546 2 0.45829 1.7196 1 0.62149 2.3385 -2.0505 -2.0143 2 1.7214 1.3935 2 -1.973 1.0241 -0.84131 -0.017525 1 -1.3151 -0.89644 2 -0.75598 -1.0529 0.10476 --0.041089 1 -0.071698 -0.33496 2 -0.25915 -0.26742 0.55857 --0.072325 2 0.14302 1.099 2 0.45095 0.51954 -1.5626 -0.9507 1 -0.99789 -1.1502 2 -0.63471 0.61259 0.50045 --1.8153 1 -0.51697 -0.18793 2 -0.58518 -0.41489 -0.79317 --0.37059 1 -0.18087 -0.77008 1 0.14794 -0.66655 0.62321 --0.24334 1 0.033188 -0.22919 2 -1.8202 -0.18936 -0.69098 --0.83923 1 -0.41353 -1.3264 1 1.8901 -1.3452 0.28542 --1.5292 1 -0.28479 -0.49856 2 0.34714 -1.4144 -0.50498 --1.1641 2 0.77391 1.0241 2 -0.77302 0.27655 -2.6887 -2.6624 2 1.7387 1.374 2 0.041422 2.3695 -0.062437 -2.3682 2 1.907 0.94637 1 0.8413 0.76571 -1.6402 -0.31396 1 -1.292 -0.78457 1 -0.31227 -0.84139 -0.22931 --0.87392 1 0.53494 0.55115 2 -0.15179 -0.83441 1.0812 --1.1022 1 -0.57856 -0.21265 1 1.4486 0.11044 -0.38779 -0.42993 1 -1.5502 -0.063309 1 2.2649 -0.59644 2.3369 --1.5011 1 -2.2926 -0.96909 2 -0.40571 -1.1012 0.55992 --1.567 2 0.014611 -0.069863 1 1.3161 0.89287 0.96849 -0.26418 2 0.46242 1.94 2 -1.3016 1.1926 -1.5231 --0.77783 2 1.4946 0.92514 2 -1.1651 1.0425 -1.2692 --0.17339 1 -0.86526 -0.090231 2 -0.09102 -1.3706 0.0046364 -0.11883 2 0.8622 0.94077 2 -0.76414 1.3308 1.4151 -0.12005 1 -0.20542 -0.74536 2 -1.2579 -1.2279 -1.2716 --0.79628 1 -0.022269 -0.16145 2 -0.47715 -0.37329 1.1973 -0.58969 2 1.0063 1.3356 1 0.79987 1.5464 0.32778 -0.11633 2 0.73396 1.1437 1 1.3183 1.0156 -1.9521 --0.88008 1 0.39215 -0.88212 1 0.77879 -0.071244 0.92159 --0.74781 1 -0.31657 -1.2371 2 -1.356 -0.76328 -0.96718 --0.069788 1 0.63495 -0.70214 2 -0.76454 -2.2215 1.7057 -0.3897 1 -0.59859 -0.81633 2 -0.04446 0.84047 -0.75128 -2.202 2 0.77915 0.03712 1 1.8438 1.1743 0.40311 -0.22687 1 -0.40806 -1.0788 2 -0.19213 -0.78118 0.48283 --0.66335 2 1.4808 1.1399 2 -0.033787 0.43484 -0.12131 -0.13303 1 -0.66658 -0.14357 2 -1.073 -0.49395 0.70644 --1.5417 2 0.2473 1.2125 1 1.9083 1.2778 3.085 -0.74601 2 -0.35212 0.88616 2 -0.87675 0.60499 -0.21171 --0.80655 1 -1.1068 -1.3459 2 -0.26122 0.15508 -0.0070062 --0.69135 2 1.0994 1.204 1 2.3161 1.0629 1.4257 -1.6905 1 -0.14242 -0.55749 1 0.359 0.41916 0.53199 --0.77018 1 -1.5065 -0.53604 2 0.19357 0.059861 1.9155 --2.2055 2 1.058 -0.29035 1 1.0301 0.11952 1.1589 --0.70569 1 -0.73004 -1.6228 1 2.1348 -0.42942 0.9784 -1.3633 2 0.65794 0.98061 1 1.3078 0.64345 0.83163 -0.093858 1 -1.6142 -0.92049 2 -0.92394 -1.3444 -0.43257 -1.6603 1 0.037058 0.81538 2 -0.70654 -0.93759 -0.023971 -0.29687 2 0.84923 0.6669 1 0.66467 0.47209 -0.21304 -0.30837 1 -0.8147 -1.3296 2 -1.1736 -1.2252 -0.61307 --1.7779 1 -1.1384 -1.0425 2 -0.69411 -0.39049 -0.48426 --0.35135 1 -0.52672 -1.388 1 0.84612 -1.4625 0.071531 -0.18294 1 -0.96354 -0.6923 2 -0.91232 -0.9204 0.029913 --0.34302 2 1.8167 0.77427 1 0.036232 0.81699 1.0643 --1.0367 1 -0.55158 -0.84582 1 0.67713 -0.66779 -0.43147 -2.6147 1 0.14282 -0.33616 2 -0.83219 -0.17633 -0.13154 --0.59086 1 -1.2139 -0.99552 1 1.9391 -1.1308 0.34104 --0.90208 1 -0.28263 -0.58061 1 0.7467 -0.84617 -0.13434 -1.2668 1 -0.56449 -0.1964 2 0.79248 0.19601 0.41757 -0.75643 2 -0.011136 0.81301 2 0.34117 0.68247 -1.8639 --0.62022 2 0.86997 0.6729 2 -1.1203 0.17657 -1.4252 --0.18946 1 -0.55133 -0.86512 2 -0.83578 -0.40257 -0.03024 --1.5498 2 0.32287 1.184 2 -0.62378 0.80455 0.92802 --0.53493 1 -0.9391 -0.84301 1 1.3501 -0.31379 -0.058359 -0.3655 1 -0.74384 -1.3595 2 1.3067 -0.5247 -1.7346 -0.82879 1 -1.5915 -1.0102 1 1.0708 -0.6468 0.92563 -0.57673 1 -1.4808 -1.0779 2 0.47651 -1.062 0.26109 -0.59244 1 -0.8026 -1.7146 2 -0.020034 -1.3898 -1.5713 -0.44996 2 0.50751 1.0983 1 2.2137 2.8355 0.34885 --0.75132 1 -0.52338 -0.74591 2 -0.84637 -1.6929 -1.6592 --0.1943 2 1.2265 0.4739 2 -0.78558 0.81272 -0.023571 -2.0866 1 -0.19274 0.066839 2 -0.30442 -0.70635 0.8594 --1.3268 1 -1.2952 0.023312 1 1.4432 0.036383 0.89534 --1.4174 1 -0.43139 -0.97617 1 1.9378 0.79311 -0.17685 --0.30469 1 0.072833 -0.069195 1 1.2683 -0.62404 0.25508 diff --git a/sourcecodes/data/temp_evidence_file b/sourcecodes/data/temp_evidence_file deleted file mode 100644 index b687ceaf..00000000 --- a/sourcecodes/data/temp_evidence_file +++ /dev/null @@ -1,36 +0,0 @@ -#!/bin/sh -# script for execution of deployed applications -# -# Sets up the MCR environment for the current $ARCH and executes -# the specified command. -# -exe_name=$0 -exe_dir=`dirname "$0"` -echo "------------------------------------------" -if [ "x$1" = "x" ]; then - echo Usage: - echo $0 \ args -else - echo Setting up environment variables - MCRROOT="$1" - echo --- - LD_LIBRARY_PATH=.:${MCRROOT}/runtime/glnxa64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/bin/glnxa64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/sys/os/glnxa64; - MCRJRE=${MCRROOT}/sys/java/jre/glnxa64/jre/lib/amd64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/native_threads ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/server ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/client ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE} ; - XAPPLRESDIR=${MCRROOT}/X11/app-defaults ; - export LD_LIBRARY_PATH; - export XAPPLRESDIR; - echo LD_LIBRARY_PATH is ${LD_LIBRARY_PATH}; - shift 1 - args= - while [ $# -gt 0 ]; do - token=`echo "$1" | sed 's/ /\\\\ /g'` # Add blackslash before each blank - args="${args} ${token}" - shift - done - "${exe_dir}"/evidencemodified \ No newline at end of file diff --git a/sourcecodes/data/temp_intervention_file b/sourcecodes/data/temp_intervention_file deleted file mode 100644 index cdf5ce0f..00000000 --- a/sourcecodes/data/temp_intervention_file +++ /dev/null @@ -1,36 +0,0 @@ -#!/bin/sh -# script for execution of deployed applications -# -# Sets up the MCR environment for the current $ARCH and executes -# the specified command. -# -exe_name=$0 -exe_dir=`dirname "$0"` -echo "------------------------------------------" -if [ "x$1" = "x" ]; then - echo Usage: - echo $0 \ args -else - echo Setting up environment variables - MCRROOT="$1" - echo --- - LD_LIBRARY_PATH=.:${MCRROOT}/runtime/glnxa64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/bin/glnxa64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/sys/os/glnxa64; - MCRJRE=${MCRROOT}/sys/java/jre/glnxa64/jre/lib/amd64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/native_threads ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/server ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/client ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE} ; - XAPPLRESDIR=${MCRROOT}/X11/app-defaults ; - export LD_LIBRARY_PATH; - export XAPPLRESDIR; - echo LD_LIBRARY_PATH is ${LD_LIBRARY_PATH}; - shift 1 - args= - while [ $# -gt 0 ]; do - token=`echo "$1" | sed 's/ /\\\\ /g'` # Add blackslash before each blank - args="${args} ${token}" - shift - done - "${exe_dir}"/newintervention \ No newline at end of file diff --git a/sourcecodes/data/temp_shell_file_initial_structure b/sourcecodes/data/temp_shell_file_initial_structure deleted file mode 100644 index 5d1c323d..00000000 --- a/sourcecodes/data/temp_shell_file_initial_structure +++ /dev/null @@ -1,36 +0,0 @@ -#!/bin/sh -# script for execution of deployed applications -# -# Sets up the MCR environment for the current $ARCH and executes -# the specified command. -# -exe_name=$0 -exe_dir=`dirname "$0"` -echo "------------------------------------------" -if [ "x$1" = "x" ]; then - echo Usage: - echo $0 \ args -else - echo Setting up environment variables - MCRROOT="$1" - echo --- - LD_LIBRARY_PATH=.:${MCRROOT}/runtime/glnxa64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/bin/glnxa64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRROOT}/sys/os/glnxa64; - MCRJRE=${MCRROOT}/sys/java/jre/glnxa64/jre/lib/amd64 ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/native_threads ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/server ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE}/client ; - LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MCRJRE} ; - XAPPLRESDIR=${MCRROOT}/X11/app-defaults ; - export LD_LIBRARY_PATH; - export XAPPLRESDIR; - echo LD_LIBRARY_PATH is ${LD_LIBRARY_PATH}; - shift 1 - args= - while [ $# -gt 0 ]; do - token=`echo "$1" | sed 's/ /\\\\ /g'` # Add blackslash before each blank - args="${args} ${token}" - shift - done - "${exe_dir}"/initialstructure \ No newline at end of file -- cgit 1.4.1