From c80226899f5cdd9f11c163817d59445213f5bef0 Mon Sep 17 00:00:00 2001 From: ziejd2 Date: Wed, 14 Mar 2018 23:19:16 -0500 Subject: Separating Octave and php calculations --- .../test/Agbcontinuous_input.txt | 103 ----- sourcecodes/parameter_learning/test/Agbmap.txt | 6 - sourcecodes/parameter_learning/test/Agbmapdata.txt | 1 - .../parameter_learning/test/Agbnet_figure.txt | 440 --------------------- .../parameter_learning/test/Agbnet_figure.txt.bk | 440 --------------------- sourcecodes/parameter_learning/test/Agbnnode.txt | 1 - .../parameter_learning/test/Agbstructure_input.txt | 7 - sourcecodes/parameter_learning/test/octave-core | Bin 247702 -> 0 bytes 8 files changed, 998 deletions(-) delete mode 100644 sourcecodes/parameter_learning/test/Agbcontinuous_input.txt delete mode 100644 sourcecodes/parameter_learning/test/Agbmap.txt delete mode 100644 sourcecodes/parameter_learning/test/Agbmapdata.txt delete mode 100644 sourcecodes/parameter_learning/test/Agbnet_figure.txt delete mode 100644 sourcecodes/parameter_learning/test/Agbnet_figure.txt.bk delete mode 100644 sourcecodes/parameter_learning/test/Agbnnode.txt delete mode 100644 sourcecodes/parameter_learning/test/Agbstructure_input.txt delete mode 100644 sourcecodes/parameter_learning/test/octave-core (limited to 'sourcecodes/parameter_learning/test') diff --git a/sourcecodes/parameter_learning/test/Agbcontinuous_input.txt b/sourcecodes/parameter_learning/test/Agbcontinuous_input.txt deleted file mode 100644 index bcd9b88c..00000000 --- a/sourcecodes/parameter_learning/test/Agbcontinuous_input.txt +++ /dev/null @@ -1,103 +0,0 @@ -GenotypeA GenotypeB Gene1 Gene2 Gene3 Gene4 -2 2 1 1 1 1 -1 1 0.0735451012188 0.807744827105 -0.141557122166 0.871977046116 -2 1 0.0783291492541 0.784023461068 0.501395957396 1.20598627055 -2 1 0.786243065384 0.978600201012 1.10615045137 0.91427570527 -2 1 -0.133165253244 1.09368397217 0.943147613583 1.28625182746 -2 1 0.849732696834 0.701697179341 1.1597647359 1.10898527576 -2 1 0.117358779641 1.27641582521 1.07600246132 0.837957699405 -1 2 0.260845541489 0.126507267356 0.134953769296 1.05166904426 -2 1 0.277734881926 1.07193390309 0.282304188176 1.11305323003 -1 2 0.23482774261 1.22992089679 0.0929753295409 1.16341704702 -1 2 0.948183366714 0.133267523413 -0.218162396333 0.906540379337 -2 1 -0.116613369121 1.14203606435 0.109901766308 0.729527128692 -1 1 -0.179825551391 0.10619275827 0.937787825497 1.03567603615 -2 1 0.293022973091 1.08721255661 -0.175473007708 0.887010836361 -2 1 -0.0489346771642 0.968137836317 0.107834185199 0.896061918536 -1 2 0.236140871956 -0.0428030926592 -0.318492104268 0.570552965391 -2 2 -0.0800211950407 0.69984329873 0.188143588172 1.31042305844 -1 1 -0.0036838396465 0.115049518621 1.23342471413 -0.0310668924648 -1 2 0.821596343182 -0.206883091797 -0.176745465075 1.00503814188 -2 1 0.968136985881 0.17393492998 1.10355204542 1.50730341194 -1 1 -0.2529273487 1.15825296446 -0.296758267158 0.334353609539 -2 2 0.996924729837 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-0.140625204522 1.08080017243 -2 1 1.2385313097 1.0695347389 -0.176990709153 0.848256839162 -1 2 0.186923583294 0.119157644078 0.0349289573077 0.744803259527 -1 2 1.09352177593 0.194715059877 0.0236391004662 0.499673191061 -2 1 -0.376369481804 0.985546924317 0.0945527339598 0.948918281956 -1 1 1.18474855816 -0.115831486698 0.283152200427 0.970403352935 -2 2 1.15179008534 1.11293520284 0.221811798026 0.999871011204 -1 2 -0.270193067228 1.1546656712 -0.244378116913 0.671654326382 -2 2 0.439331185377 1.12197569445 0.258362973013 1.11146143747 -2 2 1.01095806207 0.745930460781 -0.0409015639874 1.14791250376 -2 1 -0.26402775558 1.0189980863 0.0142629520115 0.959203836932 -1 1 1.1622683144 -0.0120889455187 1.07714267283 -0.177584275215 -1 1 0.942340790264 0.254818931717 0.0587741977709 0.980453538135 -2 2 0.106324819492 0.79161883369 -0.16526611256 0.916230483749 -2 1 1.19278065887 0.913551161988 -0.0956615348665 1.05953140511 -1 1 0.99020996204 -0.0516709802571 0.785783698942 1.47690006823 -2 1 1.1566705292 1.05878794929 0.0968404106402 0.827720917511 -1 2 0.05207115921 -0.252341077617 -0.0848699551554 1.19139462554 -2 2 0.991086851115 -0.301180892331 -0.00253197995383 1.46608138294 - diff --git a/sourcecodes/parameter_learning/test/Agbmap.txt b/sourcecodes/parameter_learning/test/Agbmap.txt deleted file mode 100644 index bb1dd64f..00000000 --- a/sourcecodes/parameter_learning/test/Agbmap.txt +++ /dev/null @@ -1,6 +0,0 @@ -GenotypeA 2 0.502519 1.500000 -GenotypeB 1 0.500908 1.460000 -Gene1 2 0.553536 0.475371 -Gene2 1 0.485907 0.701417 -Gene3 1 0.485352 0.313494 -Gene4 1 0.435265 0.819489 diff --git a/sourcecodes/parameter_learning/test/Agbmapdata.txt b/sourcecodes/parameter_learning/test/Agbmapdata.txt deleted file mode 100644 index fa8be0bd..00000000 --- a/sourcecodes/parameter_learning/test/Agbmapdata.txt +++ /dev/null @@ -1 +0,0 @@ -GenotypeB Gene3 GenotypeA Gene2 Gene4 Gene1 diff --git a/sourcecodes/parameter_learning/test/Agbnet_figure.txt b/sourcecodes/parameter_learning/test/Agbnet_figure.txt deleted file mode 100644 index 8243b7d9..00000000 --- a/sourcecodes/parameter_learning/test/Agbnet_figure.txt +++ /dev/null @@ -1,440 +0,0 @@ -6 -1200 1200 -GenotypeB 0 0 -Gene3 120 300 -GenotypeA 400 0 -Gene2 520 300 -Gene4 0 600 -Gene1 400 600 -GenotypeB 2 -250 150 -0 -2 2 5 -1 0.5400 -2 0.4600 -Gene3 1 -250 150 -1 1 -0 --2.6875 0.0108 --2.6281 0.0126 --2.5688 0.0147 --2.5095 0.0171 --2.4501 0.0198 --2.3908 0.0229 --2.3315 0.0263 --2.2721 0.0302 --2.2128 0.0345 --2.1535 0.0393 --2.0941 0.0445 --2.0348 0.0503 --1.9754 0.0567 --1.9161 0.0636 --1.8568 0.0712 --1.7974 0.0793 --1.7381 0.0881 --1.6788 0.0975 --1.6194 0.1075 --1.5601 0.1181 --1.5008 0.1294 --1.4414 0.1412 --1.3821 0.1535 --1.3227 0.1663 --1.2634 0.1796 --1.2041 0.1932 --1.1447 0.2072 --1.0854 0.2214 --1.0261 0.2357 --0.9667 0.2500 --0.9074 0.2643 --0.8480 0.2784 --0.7887 0.2923 --0.7294 0.3058 --0.6700 0.3187 --0.6107 0.3311 --0.5514 0.3427 --0.4920 0.3535 --0.4327 0.3633 --0.3734 0.3721 --0.3140 0.3797 --0.2547 0.3862 --0.1953 0.3914 --0.1360 0.3953 --0.0767 0.3978 --0.0173 0.3989 -0.0420 0.3986 -0.1013 0.3969 -0.1607 0.3938 -0.2200 0.3894 -0.2793 0.3837 -0.3387 0.3767 -0.3980 0.3686 -0.4574 0.3593 -0.5167 0.3491 -0.5760 0.3380 -0.6354 0.3260 -0.6947 0.3134 -0.7540 0.3002 -0.8134 0.2866 -0.8727 0.2726 -0.9320 0.2584 -0.9914 0.2441 -1.0507 0.2297 -1.1101 0.2154 -1.1694 0.2014 -1.2287 0.1875 -1.2881 0.1740 -1.3474 0.1609 -1.4067 0.1483 -1.4661 0.1362 -1.5254 0.1246 -1.5848 0.1136 -1.6441 0.1033 -1.7034 0.0935 -1.7628 0.0844 -1.8221 0.0759 -1.8814 0.0680 -1.9408 0.0607 -2.0001 0.0540 -2.0594 0.0479 -2.1188 0.0423 -2.1781 0.0372 -2.2375 0.0326 -2.2968 0.0285 -2.3561 0.0249 -2.4155 0.0216 -2.4748 0.0187 -2.5341 0.0161 -2.5935 0.0138 -2.6528 0.0118 -2.7121 0.0101 -2.7715 0.0086 -2.8308 0.0073 -2.8902 0.0061 -2.9495 0.0052 -3.0088 0.0043 -3.0682 0.0036 -3.1275 0.0030 -3.1868 0.0025 -3.2462 0.0021 -GenotypeA 2 -250 150 -0 -2 4 5 -1 0.5000 -2 0.5000 -Gene2 1 -250 150 -1 3 -2 5 6 --3.0727 0.0036 --3.0161 0.0042 --2.9594 0.0050 --2.9028 0.0059 --2.8462 0.0069 --2.7896 0.0081 --2.7330 0.0095 --2.6763 0.0111 --2.6197 0.0129 --2.5631 0.0149 --2.5065 0.0172 --2.4499 0.0198 --2.3933 0.0228 --2.3366 0.0260 --2.2800 0.0297 --2.2234 0.0337 --2.1668 0.0381 --2.1102 0.0431 --2.0535 0.0484 --1.9969 0.0543 --1.9403 0.0607 --1.8837 0.0677 --1.8271 0.0752 --1.7705 0.0832 --1.7138 0.0919 --1.6572 0.1011 --1.6006 0.1108 --1.5440 0.1211 --1.4874 0.1320 --1.4307 0.1434 --1.3741 0.1552 --1.3175 0.1675 --1.2609 0.1802 --1.2043 0.1932 --1.1476 0.2065 --1.0910 0.2200 --1.0344 0.2336 --0.9778 0.2473 --0.9212 0.2610 --0.8646 0.2745 --0.8079 0.2878 --0.7513 0.3008 --0.6947 0.3134 --0.6381 0.3255 --0.5815 0.3369 --0.5248 0.3476 --0.4682 0.3575 --0.4116 0.3665 --0.3550 0.3746 --0.2984 0.3816 --0.2418 0.3875 --0.1851 0.3922 --0.1285 0.3957 --0.0719 0.3979 --0.0153 0.3989 -0.0413 0.3986 -0.0980 0.3970 -0.1546 0.3942 -0.2112 0.3901 -0.2678 0.3849 -0.3244 0.3785 -0.3810 0.3710 -0.4377 0.3625 -0.4943 0.3531 -0.5509 0.3428 -0.6075 0.3317 -0.6641 0.3200 -0.7208 0.3077 -0.7774 0.2949 -0.8340 0.2818 -0.8906 0.2683 -0.9472 0.2547 -1.0039 0.2410 -1.0605 0.2274 -1.1171 0.2138 -1.1737 0.2003 -1.2303 0.1872 -1.2869 0.1743 -1.3436 0.1618 -1.4002 0.1497 -1.4568 0.1381 -1.5134 0.1269 -1.5700 0.1163 -1.6267 0.1063 -1.6833 0.0967 -1.7399 0.0878 -1.7965 0.0794 -1.8531 0.0716 -1.9097 0.0644 -1.9664 0.0577 -2.0230 0.0516 -2.0796 0.0459 -2.1362 0.0407 -2.1928 0.0360 -2.2495 0.0318 -2.3061 0.0279 -2.3627 0.0245 -2.4193 0.0214 -2.4759 0.0186 -2.5326 0.0161 -2.5892 0.0140 -Gene4 1 -250 150 -3 1 3 4 -0 --3.7331 0.0009 --3.6699 0.0011 --3.6068 0.0014 --3.5437 0.0016 --3.4805 0.0020 --3.4174 0.0024 --3.3543 0.0029 --3.2911 0.0035 --3.2280 0.0042 --3.1649 0.0050 --3.1017 0.0059 --3.0386 0.0070 --2.9755 0.0083 --2.9123 0.0097 --2.8492 0.0114 --2.7861 0.0133 --2.7229 0.0154 --2.6598 0.0179 --2.5967 0.0206 --2.5335 0.0238 --2.4704 0.0273 --2.4073 0.0312 --2.3441 0.0355 --2.2810 0.0403 --2.2179 0.0455 --2.1547 0.0513 --2.0916 0.0577 --2.0285 0.0645 --1.9653 0.0720 --1.9022 0.0800 --1.8391 0.0886 --1.7759 0.0978 --1.7128 0.1075 --1.6497 0.1178 --1.5865 0.1287 --1.5234 0.1401 --1.4603 0.1519 --1.3971 0.1642 --1.3340 0.1768 --1.2709 0.1897 --1.2077 0.2029 --1.1446 0.2162 --1.0815 0.2296 --1.0183 0.2430 --0.9552 0.2563 --0.8921 0.2693 --0.8290 0.2820 --0.7658 0.2943 --0.7027 0.3061 --0.6396 0.3172 --0.5764 0.3275 --0.5133 0.3371 --0.4502 0.3456 --0.3870 0.3532 --0.3239 0.3597 --0.2608 0.3650 --0.1976 0.3691 --0.1345 0.3719 --0.0714 0.3735 --0.0082 0.3737 -0.0549 0.3727 -0.1180 0.3703 -0.1812 0.3667 -0.2443 0.3618 -0.3074 0.3558 -0.3706 0.3486 -0.4337 0.3404 -0.4968 0.3312 -0.5600 0.3212 -0.6231 0.3103 -0.6862 0.2988 -0.7494 0.2867 -0.8125 0.2741 -0.8756 0.2612 -0.9388 0.2480 -1.0019 0.2347 -1.0650 0.2213 -1.1282 0.2079 -1.1913 0.1947 -1.2544 0.1816 -1.3176 0.1689 -1.3807 0.1565 -1.4438 0.1445 -1.5070 0.1329 -1.5701 0.1219 -1.6332 0.1113 -1.6964 0.1014 -1.7595 0.0920 -1.8226 0.0831 -1.8858 0.0749 -1.9489 0.0673 -2.0120 0.0602 -2.0752 0.0536 -2.1383 0.0477 -2.2014 0.0422 -2.2646 0.0372 -2.3277 0.0327 -2.3908 0.0287 -2.4540 0.0250 -2.5171 0.0218 -2.5802 0.0189 -Gene1 1 -250 150 -1 4 -0 --2.8174 0.0076 --2.7627 0.0088 --2.7080 0.0102 --2.6533 0.0119 --2.5985 0.0137 --2.5438 0.0158 --2.4891 0.0181 --2.4343 0.0207 --2.3796 0.0236 --2.3249 0.0268 --2.2702 0.0304 --2.2154 0.0344 --2.1607 0.0387 --2.1060 0.0435 --2.0512 0.0488 --1.9965 0.0545 --1.9418 0.0607 --1.8871 0.0674 --1.8323 0.0746 --1.7776 0.0823 --1.7229 0.0906 --1.6682 0.0994 --1.6134 0.1087 --1.5587 0.1185 --1.5040 0.1289 --1.4492 0.1397 --1.3945 0.1510 --1.3398 0.1627 --1.2851 0.1748 --1.2303 0.1872 --1.1756 0.2000 --1.1209 0.2129 --1.0661 0.2260 --1.0114 0.2392 --0.9567 0.2524 --0.9020 0.2656 --0.8472 0.2786 --0.7925 0.2914 --0.7378 0.3038 --0.6830 0.3158 --0.6283 0.3273 --0.5736 0.3383 --0.5189 0.3485 --0.4641 0.3580 --0.4094 0.3667 --0.3547 0.3744 --0.2999 0.3811 --0.2452 0.3869 --0.1905 0.3915 --0.1358 0.3950 --0.0810 0.3974 --0.0263 0.3985 -0.0284 0.3985 -0.0832 0.3973 -0.1379 0.3949 -0.1926 0.3913 -0.2473 0.3867 -0.3021 0.3809 -0.3568 0.3741 -0.4115 0.3663 -0.4663 0.3577 -0.5210 0.3481 -0.5757 0.3379 -0.6304 0.3269 -0.6852 0.3154 -0.7399 0.3033 -0.7946 0.2909 -0.8493 0.2781 -0.9041 0.2651 -0.9588 0.2519 -1.0135 0.2387 -1.0683 0.2255 -1.1230 0.2124 -1.1777 0.1995 -1.2324 0.1867 -1.2872 0.1743 -1.3419 0.1622 -1.3966 0.1505 -1.4514 0.1393 -1.5061 0.1285 -1.5608 0.1181 -1.6155 0.1083 -1.6703 0.0990 -1.7250 0.0902 -1.7797 0.0820 -1.8345 0.0743 -1.8892 0.0671 -1.9439 0.0604 -1.9986 0.0543 -2.0534 0.0486 -2.1081 0.0433 -2.1628 0.0386 -2.2176 0.0342 -2.2723 0.0303 -2.3270 0.0267 -2.3817 0.0235 -2.4365 0.0206 -2.4912 0.0180 -2.5459 0.0157 -2.6007 0.0136 -2.6554 0.0118 diff --git a/sourcecodes/parameter_learning/test/Agbnet_figure.txt.bk b/sourcecodes/parameter_learning/test/Agbnet_figure.txt.bk deleted file mode 100644 index 8243b7d9..00000000 --- a/sourcecodes/parameter_learning/test/Agbnet_figure.txt.bk +++ /dev/null @@ -1,440 +0,0 @@ -6 -1200 1200 -GenotypeB 0 0 -Gene3 120 300 -GenotypeA 400 0 -Gene2 520 300 -Gene4 0 600 -Gene1 400 600 -GenotypeB 2 -250 150 -0 -2 2 5 -1 0.5400 -2 0.4600 -Gene3 1 -250 150 -1 1 -0 --2.6875 0.0108 --2.6281 0.0126 --2.5688 0.0147 --2.5095 0.0171 --2.4501 0.0198 --2.3908 0.0229 --2.3315 0.0263 --2.2721 0.0302 --2.2128 0.0345 --2.1535 0.0393 --2.0941 0.0445 --2.0348 0.0503 --1.9754 0.0567 --1.9161 0.0636 --1.8568 0.0712 --1.7974 0.0793 --1.7381 0.0881 --1.6788 0.0975 --1.6194 0.1075 --1.5601 0.1181 --1.5008 0.1294 --1.4414 0.1412 --1.3821 0.1535 --1.3227 0.1663 --1.2634 0.1796 --1.2041 0.1932 --1.1447 0.2072 --1.0854 0.2214 --1.0261 0.2357 --0.9667 0.2500 --0.9074 0.2643 --0.8480 0.2784 --0.7887 0.2923 --0.7294 0.3058 --0.6700 0.3187 --0.6107 0.3311 --0.5514 0.3427 --0.4920 0.3535 --0.4327 0.3633 --0.3734 0.3721 --0.3140 0.3797 --0.2547 0.3862 --0.1953 0.3914 --0.1360 0.3953 --0.0767 0.3978 --0.0173 0.3989 -0.0420 0.3986 -0.1013 0.3969 -0.1607 0.3938 -0.2200 0.3894 -0.2793 0.3837 -0.3387 0.3767 -0.3980 0.3686 -0.4574 0.3593 -0.5167 0.3491 -0.5760 0.3380 -0.6354 0.3260 -0.6947 0.3134 -0.7540 0.3002 -0.8134 0.2866 -0.8727 0.2726 -0.9320 0.2584 -0.9914 0.2441 -1.0507 0.2297 -1.1101 0.2154 -1.1694 0.2014 -1.2287 0.1875 -1.2881 0.1740 -1.3474 0.1609 -1.4067 0.1483 -1.4661 0.1362 -1.5254 0.1246 -1.5848 0.1136 -1.6441 0.1033 -1.7034 0.0935 -1.7628 0.0844 -1.8221 0.0759 -1.8814 0.0680 -1.9408 0.0607 -2.0001 0.0540 -2.0594 0.0479 -2.1188 0.0423 -2.1781 0.0372 -2.2375 0.0326 -2.2968 0.0285 -2.3561 0.0249 -2.4155 0.0216 -2.4748 0.0187 -2.5341 0.0161 -2.5935 0.0138 -2.6528 0.0118 -2.7121 0.0101 -2.7715 0.0086 -2.8308 0.0073 -2.8902 0.0061 -2.9495 0.0052 -3.0088 0.0043 -3.0682 0.0036 -3.1275 0.0030 -3.1868 0.0025 -3.2462 0.0021 -GenotypeA 2 -250 150 -0 -2 4 5 -1 0.5000 -2 0.5000 -Gene2 1 -250 150 -1 3 -2 5 6 --3.0727 0.0036 --3.0161 0.0042 --2.9594 0.0050 --2.9028 0.0059 --2.8462 0.0069 --2.7896 0.0081 --2.7330 0.0095 --2.6763 0.0111 --2.6197 0.0129 --2.5631 0.0149 --2.5065 0.0172 --2.4499 0.0198 --2.3933 0.0228 --2.3366 0.0260 --2.2800 0.0297 --2.2234 0.0337 --2.1668 0.0381 --2.1102 0.0431 --2.0535 0.0484 --1.9969 0.0543 --1.9403 0.0607 --1.8837 0.0677 --1.8271 0.0752 --1.7705 0.0832 --1.7138 0.0919 --1.6572 0.1011 --1.6006 0.1108 --1.5440 0.1211 --1.4874 0.1320 --1.4307 0.1434 --1.3741 0.1552 --1.3175 0.1675 --1.2609 0.1802 --1.2043 0.1932 --1.1476 0.2065 --1.0910 0.2200 --1.0344 0.2336 --0.9778 0.2473 --0.9212 0.2610 --0.8646 0.2745 --0.8079 0.2878 --0.7513 0.3008 --0.6947 0.3134 --0.6381 0.3255 --0.5815 0.3369 --0.5248 0.3476 --0.4682 0.3575 --0.4116 0.3665 --0.3550 0.3746 --0.2984 0.3816 --0.2418 0.3875 --0.1851 0.3922 --0.1285 0.3957 --0.0719 0.3979 --0.0153 0.3989 -0.0413 0.3986 -0.0980 0.3970 -0.1546 0.3942 -0.2112 0.3901 -0.2678 0.3849 -0.3244 0.3785 -0.3810 0.3710 -0.4377 0.3625 -0.4943 0.3531 -0.5509 0.3428 -0.6075 0.3317 -0.6641 0.3200 -0.7208 0.3077 -0.7774 0.2949 -0.8340 0.2818 -0.8906 0.2683 -0.9472 0.2547 -1.0039 0.2410 -1.0605 0.2274 -1.1171 0.2138 -1.1737 0.2003 -1.2303 0.1872 -1.2869 0.1743 -1.3436 0.1618 -1.4002 0.1497 -1.4568 0.1381 -1.5134 0.1269 -1.5700 0.1163 -1.6267 0.1063 -1.6833 0.0967 -1.7399 0.0878 -1.7965 0.0794 -1.8531 0.0716 -1.9097 0.0644 -1.9664 0.0577 -2.0230 0.0516 -2.0796 0.0459 -2.1362 0.0407 -2.1928 0.0360 -2.2495 0.0318 -2.3061 0.0279 -2.3627 0.0245 -2.4193 0.0214 -2.4759 0.0186 -2.5326 0.0161 -2.5892 0.0140 -Gene4 1 -250 150 -3 1 3 4 -0 --3.7331 0.0009 --3.6699 0.0011 --3.6068 0.0014 --3.5437 0.0016 --3.4805 0.0020 --3.4174 0.0024 --3.3543 0.0029 --3.2911 0.0035 --3.2280 0.0042 --3.1649 0.0050 --3.1017 0.0059 --3.0386 0.0070 --2.9755 0.0083 --2.9123 0.0097 --2.8492 0.0114 --2.7861 0.0133 --2.7229 0.0154 --2.6598 0.0179 --2.5967 0.0206 --2.5335 0.0238 --2.4704 0.0273 --2.4073 0.0312 --2.3441 0.0355 --2.2810 0.0403 --2.2179 0.0455 --2.1547 0.0513 --2.0916 0.0577 --2.0285 0.0645 --1.9653 0.0720 --1.9022 0.0800 --1.8391 0.0886 --1.7759 0.0978 --1.7128 0.1075 --1.6497 0.1178 --1.5865 0.1287 --1.5234 0.1401 --1.4603 0.1519 --1.3971 0.1642 --1.3340 0.1768 --1.2709 0.1897 --1.2077 0.2029 --1.1446 0.2162 --1.0815 0.2296 --1.0183 0.2430 --0.9552 0.2563 --0.8921 0.2693 --0.8290 0.2820 --0.7658 0.2943 --0.7027 0.3061 --0.6396 0.3172 --0.5764 0.3275 --0.5133 0.3371 --0.4502 0.3456 --0.3870 0.3532 --0.3239 0.3597 --0.2608 0.3650 --0.1976 0.3691 --0.1345 0.3719 --0.0714 0.3735 --0.0082 0.3737 -0.0549 0.3727 -0.1180 0.3703 -0.1812 0.3667 -0.2443 0.3618 -0.3074 0.3558 -0.3706 0.3486 -0.4337 0.3404 -0.4968 0.3312 -0.5600 0.3212 -0.6231 0.3103 -0.6862 0.2988 -0.7494 0.2867 -0.8125 0.2741 -0.8756 0.2612 -0.9388 0.2480 -1.0019 0.2347 -1.0650 0.2213 -1.1282 0.2079 -1.1913 0.1947 -1.2544 0.1816 -1.3176 0.1689 -1.3807 0.1565 -1.4438 0.1445 -1.5070 0.1329 -1.5701 0.1219 -1.6332 0.1113 -1.6964 0.1014 -1.7595 0.0920 -1.8226 0.0831 -1.8858 0.0749 -1.9489 0.0673 -2.0120 0.0602 -2.0752 0.0536 -2.1383 0.0477 -2.2014 0.0422 -2.2646 0.0372 -2.3277 0.0327 -2.3908 0.0287 -2.4540 0.0250 -2.5171 0.0218 -2.5802 0.0189 -Gene1 1 -250 150 -1 4 -0 --2.8174 0.0076 --2.7627 0.0088 --2.7080 0.0102 --2.6533 0.0119 --2.5985 0.0137 --2.5438 0.0158 --2.4891 0.0181 --2.4343 0.0207 --2.3796 0.0236 --2.3249 0.0268 --2.2702 0.0304 --2.2154 0.0344 --2.1607 0.0387 --2.1060 0.0435 --2.0512 0.0488 --1.9965 0.0545 --1.9418 0.0607 --1.8871 0.0674 --1.8323 0.0746 --1.7776 0.0823 --1.7229 0.0906 --1.6682 0.0994 --1.6134 0.1087 --1.5587 0.1185 --1.5040 0.1289 --1.4492 0.1397 --1.3945 0.1510 --1.3398 0.1627 --1.2851 0.1748 --1.2303 0.1872 --1.1756 0.2000 --1.1209 0.2129 --1.0661 0.2260 --1.0114 0.2392 --0.9567 0.2524 --0.9020 0.2656 --0.8472 0.2786 --0.7925 0.2914 --0.7378 0.3038 --0.6830 0.3158 --0.6283 0.3273 --0.5736 0.3383 --0.5189 0.3485 --0.4641 0.3580 --0.4094 0.3667 --0.3547 0.3744 --0.2999 0.3811 --0.2452 0.3869 --0.1905 0.3915 --0.1358 0.3950 --0.0810 0.3974 --0.0263 0.3985 -0.0284 0.3985 -0.0832 0.3973 -0.1379 0.3949 -0.1926 0.3913 -0.2473 0.3867 -0.3021 0.3809 -0.3568 0.3741 -0.4115 0.3663 -0.4663 0.3577 -0.5210 0.3481 -0.5757 0.3379 -0.6304 0.3269 -0.6852 0.3154 -0.7399 0.3033 -0.7946 0.2909 -0.8493 0.2781 -0.9041 0.2651 -0.9588 0.2519 -1.0135 0.2387 -1.0683 0.2255 -1.1230 0.2124 -1.1777 0.1995 -1.2324 0.1867 -1.2872 0.1743 -1.3419 0.1622 -1.3966 0.1505 -1.4514 0.1393 -1.5061 0.1285 -1.5608 0.1181 -1.6155 0.1083 -1.6703 0.0990 -1.7250 0.0902 -1.7797 0.0820 -1.8345 0.0743 -1.8892 0.0671 -1.9439 0.0604 -1.9986 0.0543 -2.0534 0.0486 -2.1081 0.0433 -2.1628 0.0386 -2.2176 0.0342 -2.2723 0.0303 -2.3270 0.0267 -2.3817 0.0235 -2.4365 0.0206 -2.4912 0.0180 -2.5459 0.0157 -2.6007 0.0136 -2.6554 0.0118 diff --git a/sourcecodes/parameter_learning/test/Agbnnode.txt b/sourcecodes/parameter_learning/test/Agbnnode.txt deleted file mode 100644 index 1e8b3149..00000000 --- a/sourcecodes/parameter_learning/test/Agbnnode.txt +++ /dev/null @@ -1 +0,0 @@ -6 diff --git a/sourcecodes/parameter_learning/test/Agbstructure_input.txt b/sourcecodes/parameter_learning/test/Agbstructure_input.txt deleted file mode 100644 index 10766f0c..00000000 --- a/sourcecodes/parameter_learning/test/Agbstructure_input.txt +++ /dev/null @@ -1,7 +0,0 @@ -GenotypeA GenotypeB Gene1 Gene2 Gene3 Gene4 -0 0 0 1 0 1 -0 0 0 0 1 1 -0 0 0 0 0 0 -0 0 1 0 0 1 -0 0 0 0 0 0 -0 0 0 0 0 0 diff --git a/sourcecodes/parameter_learning/test/octave-core b/sourcecodes/parameter_learning/test/octave-core deleted file mode 100644 index 678fda92..00000000 Binary files a/sourcecodes/parameter_learning/test/octave-core and /dev/null differ -- cgit 1.4.1