From 8070dc963753142bb86c4ed698d91fd623ed28e7 Mon Sep 17 00:00:00 2001 From: ziejd2 Date: Thu, 28 Sep 2017 15:04:40 -0500 Subject: BNW using Octave instead of Matlab. This version of BNW should perform the same as the original version. The only difference is that it uses Octave instead of Matlab when running BayesNet Toolbox during parameter learning. I am calling this BNW_1.02. It can be accessed at: compbio.uthsc.edu/BNW_1.02 --- sourcecodes/bnt-master/KPMtools/asdemo.html | 690 ++++++++++++++++++++++++++++ 1 file changed, 690 insertions(+) create mode 100644 sourcecodes/bnt-master/KPMtools/asdemo.html (limited to 'sourcecodes/bnt-master/KPMtools/asdemo.html') diff --git a/sourcecodes/bnt-master/KPMtools/asdemo.html b/sourcecodes/bnt-master/KPMtools/asdemo.html new file mode 100644 index 00000000..f77c8660 --- /dev/null +++ b/sourcecodes/bnt-master/KPMtools/asdemo.html @@ -0,0 +1,690 @@ + + + + + + + + +asdemo + + + + + + + + + + + + + + + +
% ASORT
% a pedestrian NUMERICAL SORTER of ALPHANUMERIC data
 
% - create some data
          d = {
%         strings with one valid alphanumeric number
%         sorted numerically
                  '-inf'
                  'x-3.2e4y'
                  'f-1.4'
                  '-.1'
                  '+ .1d-2'
                  '.1'
                  'f.1'
                  'f -+1.4'
                  'f.2'
                  'f.3'
                  'f.10'
                  'f.11'
                  '+inf'
                  ' -nan'
                  '+ nan'
                  'nan'
%         strings with many numbers or invalid/ambiguous numbers
%         sorted in ascii dictionary order
                  ' nan nan'
                  '+ .1e-.2'
                  '-1 2'
                  'Z12e12ez'
                  'inf -inf'
                  's.3TT.4'
                  'z12e12ez'
%         strings without numbers
%         sorted in ascii dictionary order
                  ' . .. '
                  '.'
                  '...'
                  '.b a.'
                  'a string'
                  'a. .b'
          };
%   ... and scramble it...
          rand('seed',10);
          d=d(randperm(numel(d)));
 
% - run ASORT with
%   verbose output:              <-v>
%   keep additional results:     <-d>
          o=asort(d,'-v','-d');
% - or
%         p=asort(char(d),'-v','-d');
 
    'INPUT'       'ASCII SORT'    'NUM SORT'             'NUM READ'         
    '...'         ' -nan'         '--- NUMERICAL'        '--- NUMBERS'      
    '+ .1e-.2'    ' . .. '        '-inf'                 [             -Inf]
    '.1'          ' nan nan'      'x-3.2e4y'             [           -32000]
    '.b a.'       '+ .1d-2'       'f-1.4'                [             -1.4]
    '-inf'        '+ .1e-.2'      '-.1'                  [             -0.1]
    'f.1'         '+ nan'         '+ .1d-2'              [            0.001]
    ' -nan'       '+inf'          '.1'                   [              0.1]
    '-1 2'        '-.1'           'f.1'                  [                1]
    'nan'         '-1 2'          'f -+1.4'              [              1.4]
    'a string'    '-inf'          'f.2'                  [                2]
    'f.3'         '.'             'f.3'                  [                3]
    '+ .1d-2'     '...'           'f.10'                 [               10]
    'a. .b'       '.1'            'f.11'                 [               11]
    's.3TT.4'     '.b a.'         '+inf'                 [              Inf]
    '+inf'        'Z12e12ez'      ' -nan'                [              NaN]
    ' nan nan'    'a string'      '+ nan'                [              NaN]
    'f-1.4'       'a. .b'         'nan'                  [              NaN]
    'x-3.2e4y'    'f -+1.4'       '--- ASCII NUMBERS'    '--- ASCII NUMBERS'
    'inf -inf'    'f-1.4'         ' nan nan'             ' nan nan'         
    '+ nan'       'f.1'           '+ .1e-.2'             '+ .1e-.2'         
    'f.2'         'f.10'          '-1 2'                 '-1 2'             
    'f.11'        'f.11'          'Z12e12ez'             'Z12e12ez'         
    'Z12e12ez'    'f.2'           'inf -inf'             'inf -inf'         
    'z12e12ez'    'f.3'           's.3TT.4'              's.3TT.4'          
    'f -+1.4'     'inf -inf'      'z12e12ez'             'z12e12ez'         
    ' . .. '      'nan'           '--- ASCII STRINGS'    '--- ASCII STRINGS'
    'f.10'        's.3TT.4'       ' . .. '               ' . .. '           
    '.'           'x-3.2e4y'      '.'                    '.'                
    '-.1'         'z12e12ez'      '...'                  '...'              
    ' '           ' '             '.b a.'                '.b a.'            
    ' '           ' '             'a string'             'a string'         
    ' '           ' '             'a. .b'                'a. .b'            
 
% - show results
          o
o = 
          magic: 'ASORT'
            ver: '30-Mar-2005 11:57:07'
           time: '30-Mar-2005 11:57:17'
        runtime: 0.047
    input_class: 'cell'
    input_msize: [29 1]
    input_bytes: 2038
    strng_class: 'char'
    strng_msize: [29 8]
    strng_bytes: 464
            anr: {16x1 cell}
            snr: {7x1 cell}
            str: {6x1 cell}
              c: [29x12 char]
              t: [29x12 logical]
              n: [16x12 char]
              d: [16x1 double]
 
          o.anr
ans = 
    '-inf'
    'x-3.2e4y'
    'f-1.4'
    '-.1'
    '+ .1d-2'
    '.1'
    'f.1'
    'f -+1.4'
    'f.2'
    'f.3'
    'f.10'
    'f.11'
    '+inf'
    ' -nan'
    '+ nan'
    'nan'
 
% - run ASORT with no-space/template options
%   NOTE the impact of -w/-t order!
          s={'ff - 1','ff + 1','- 12'};
 
%   RAW
          o=asort(s,'-v');
 
    'INPUT'     'ASCII SORT'    'NUM SORT'             'NUM READ'         
    'ff - 1'    '- 12'          '--- NUMERICAL'        '--- NUMBERS'      
    'ff + 1'    'ff + 1'        'ff + 1'               [                1]
    '- 12'      'ff - 1'        'ff - 1'               [                1]
    ' '         ' '             '- 12'                 [               12]
    ' '         ' '             '--- ASCII NUMBERS'    '--- ASCII NUMBERS'
    ' '         ' '             '--- ASCII STRINGS'    '--- ASCII STRINGS'
 
%   remove SPACEs
          o=asort(s,'-v','-w');
 
    'INPUT'    'ASCII SORT'    'NUM SORT'             'NUM READ'         
    'ff-1'     '-12'           '--- NUMERICAL'        '--- NUMBERS'      
    'ff+1'     'ff+1'          '-12'                  [              -12]
    '-12'      'ff-1'          'ff-1'                 [               -1]
    ' '        ' '             'ff+1'                 [                1]
    ' '        ' '             '--- ASCII NUMBERS'    '--- ASCII NUMBERS'
    ' '        ' '             '--- ASCII STRINGS'    '--- ASCII STRINGS'
 
%   remove TEMPLATE(s)
          o=asort(s,'-v','-t',{'ff','1'});
 
    'INPUT'    'ASCII SORT'    'NUM SORT'             'NUM READ'         
    ' - '      ' + '           '--- NUMERICAL'        '--- NUMBERS'      
    ' + '      ' - '           '- 2'                  [                2]
    '- 2'      '- 2'           '--- ASCII NUMBERS'    '--- ASCII NUMBERS'
    ' '        ' '             '--- ASCII STRINGS'    '--- ASCII STRINGS'
    ' '        ' '             ' + '                  ' + '              
    ' '        ' '             ' - '                  ' - '              
 
%   remove TEMPLATE(s) than SPACEs
          o=asort(s,'-v','-t','1','-w');
 
    'INPUT'    'ASCII SORT'    'NUM SORT'             'NUM READ'         
    'ff-'      '-2'            '--- NUMERICAL'        '--- NUMBERS'      
    'ff+'      'ff+'           '-2'                   [               -2]
    '-2'       'ff-'           '--- ASCII NUMBERS'    '--- ASCII NUMBERS'
    ' '        ' '             '--- ASCII STRINGS'    '--- ASCII STRINGS'
    ' '        ' '             'ff+'                  'ff+'              
    ' '        ' '             'ff-'                  'ff-'              
 
%   remove SPACEs than TEMPLATE(s)
          o=asort(s,'-v','-w','-t','1');
 
    'INPUT'    'ASCII SORT'    'NUM SORT'             'NUM READ'         
    'ff- '     '- 2'           '--- NUMERICAL'        '--- NUMBERS'      
    'ff+ '     'ff+ '          '- 2'                  [                2]
    '- 2'      'ff- '          '--- ASCII NUMBERS'    '--- ASCII NUMBERS'
    ' '        ' '             '--- ASCII STRINGS'    '--- ASCII STRINGS'
    ' '        ' '             'ff+ '                 'ff+ '             
    ' '        ' '             'ff- '                 'ff- '             
 
+ +


+Published with MATLAB® 7.0.4

+ +
+ + + + + -- cgit 1.4.1