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Pjotr Prins 1 year ago
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README.md View File

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Install RStudio with R.
With GNU Guix install
Packages can be installed with, for example
guix package -i r r-markdown r-rmarkdown r-tidyverse r-hash r-hmisc
install.packages("tidyverse")
## Under GNU Guix
With GNU Guix install
guix package -i r r-markdown r-rmarkdown r-tidyverse r-hash r-hmisc
options(download.file.method="wget")
# Data


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* Malaria infection progress report
In this document we keep track of the exercise of going through the
datasets.
- [X] Running R
+ [X] Install Rstudio
+ [X] Install packages described in [[README.md]]
- [-] Learning R and loading data
+ [ ] Read 'R for Data Science'
+ [ ] Read 'Discovering Statistics with R
+ [X] Set current working directory in http://git.genenetwork.org/African-genetics/malaria-infect/src/branch/master/doc/02-load-data.Rmd#L13
+ [X] Read file in http://git.genenetwork.org/African-genetics/malaria-infect/src/branch/master/doc/02-load-data.Rmd#L27
+ [X] Some data attributes and simple plot in http://git.genenetwork.org/African-genetics/malaria-infect/src/branch/master/doc/02-load-data.Rmd#L62
+ [ ] Output in
- [-] Data wrangling
+ [X] Describe datasets in http://git.genenetwork.org/African-genetics/malaria-infect/src/branch/master/doc/01-datasets.md
Francis Ndungu & Pjotr Prins

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