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Malaria infection analysis
This repository contains the software to analyses a malaria infection dataset with outcomes.
Install RStudio with R.
Packages can be installed with, for example
Under GNU Guix
With GNU Guix install
guix package -i r r-markdown r-rmarkdown r-tidyverse r-hash r-hmisc options(download.file.method="wget")
This is pre-published data. At this point contact KEMRI if you want access. The following datasets are available:
The data is from 4 sampling locations with lots of measurements. The goal is to find predictors for outcomes. Since this is small-sized data we can use correlation and linear models using R.
Methods used are correlation, linear regression, principle component analysis, category analysis and multi-level linear models.
Code is published under the GPLv3.
Francis Ndungu & Pjotr Prins