* doc/guix.texi (Debugging Build Failures): Fix grammar.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>

* gnu/packages/video.scm (wf-recorder): New variable.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>

This has ktsudo actually gain root access.

* gnu/packages/admin.scm (ktsuss)[arguments]: Instead of <sudo>/bin/{su,sudo}
file names, use the setuid' verrsions.

* gnu/packages/wm.scm: herbstluftwm: Update to 0.8.1

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>

* gnu/packages/radio.scm (fldigi): Update to 4.1.12.

* gnu/system/file-systems.scm (%control-groups): Add "pids".
* gnu/services/docker.scm (docker-shepherd-service): Resolve a TODO.

This has allowed me to make a specific configuration of nsjail work.

* gnu/packages/machine-learning.scm (python-scikit-rebate): New variable.

* gnu/packages/bioinformatics.scm (python-deeptools): New variable.

* gnu/packages/bioinformatics.scm (python-deeptoolsintervals): New variable.

* gnu/packages/python-xyz.scm (python-bitarray): New variable.

* gnu/packages/bioconductor.scm (r-cummerbund): New variable.

* gnu/packages/cran.scm (r-inum): New variable.

* gnu/packages/cran.scm (r-ggpmisc): New variable.

* gnu/packages/bioconductor.scm (r-coverageview): New variable.

* gnu/packages/video.scm (peek): New variable.

* gnu/packages/emacs-xyz.scm (emacs-org-reveal)[description]: Fix Texinfo
syntax error.

* gnu/packages/tex.scm (texlive-inconsolata): New variable.

* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg38): New variable.

* gnu/packages/bioconductor.scm (r-karyoploter): New variable.

* gnu/packages/cran.scm (r-bezier): New variable.

* gnu/packages/bioconductor.scm (r-ideoviz): New variable.

* gnu/packages/cran.scm (r-ecp): New variable.

* gnu/packages/cran.scm (r-reordercluster): New variable.

* gnu/packages/linphone.scm (liblinphone)[outputs]: Add a "doc" and "tester"
outputs.
[phases]: Add a separate-outputs phase.  Move the
glib-or-gtk-compile-schemas and glib-or-gtk-wrap phases after it.

Libraries being linked to such as libxml2, libiconv and zlib should appear as
'inputs' rather than 'native-inputs'.

* gnu/packages/linphone.scm (liblinphone)[native-inputs]: Move libiconv,
libxml2 and zlib to...
[inputs]: ...here.  Move eudev, python-pystache and python-six to
native-inputs.

Icon themes and theme engines are best left for the users to select and
install themselves.

* gnu/packages/linphone.scm (liblinphone)[inputs]: Remove hicolor-icon-theme.
[propagated-inputs]: Remove murrine.

* gnu/packages/vpn.scm (wireguard-linux-compat)[build-system]: Replace
'gnu-build-system' by 'linux-module-build-system'.
[outputs]: Add 'kernel-patch'.
[arguments]: Adjust the build system. Add phases 'change-directory' and
'reset-cwd'. Rename phases 'build' to 'build-patch' and 'install' to
'install-patch'.
[description]: Mention the loadable module.

Signed-off-by: Leo Famulari <leo@famulari.name>

* guix/channels.scm (package-cache-file): Use 'profile' instead of
'profile-derivation'.

* gnu/system.scm (operating-system-directory-base-entries): Return a
regular, non-monadic value.
* gnu/services.scm (system-derivation): Adjust accordingly.
* gnu/system/linux-container.scm (container-essential-services): Likewise.

* guix/scripts/pack.scm (guix-pack): Use a declarative profile instead
of 'profile-derivation'.

* gnu/services.scm (packages->profile-entry): Use 'profile' instead of
'profile-derivation'.

* gnu/system.scm (operating-system-directory-base-entries): Use a
declarative profile instead of 'profile-derivation'.

* guix/profiles.scm (<profile>): New record type.
* tests/profiles.scm ("<profile>"): New test.

* gnu/packages/bioconductor.scm: Use two spaces after ending a sentence.

* gnu/packages/bioconductor.scm (r-snplocs-hsapiens-dbsnp144-grch37): New
  variable.

* gnu/packages/xorg.scm (hackneyed-x11-cursors): New variable.

* gnu/packages/bioconductor.scm (r-motifbreakr): New variable.

* gnu/packages/bioconductor.scm (r-motifdb): New variable.

* gnu/packages/bioconductor.scm (r-pasilla): New variable.

This avoids having to packages, both called guile-chickadee.

* gnu/packages/game-development.scm (guile3.0-chickadee)[name]: Change from
guile-chickadee to guile3.0-chickadee.

This commit adjusts the upgrade-services system test to not build anything
when computing the derivation for the system test.  I came across this when
looking at issues computing the system test derivations to store in the Guix
Data Service.

* gnu/tests/reconfigure.scm (run-upgrade-services-test): Remove the use of,
and definition for ensure-service-file.

* guix/scripts/substitute.scm (http-multiple-get): Add close-port call.

* guix/scripts/substitute.scm (http-multiple-get): Add batch-size parameter.

In http-multiple-get.

* guix/scripts/substitute.scm (http-multiple-get): Switch port to p in one
occurrence.

* gnu/packages/compression.scm (tarsplitter): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

* gnu/packages/video.scm (rav1e): New variable.
* gnu/packages/rust-apps.scm (rust-cbindgen-0.12, rust-cargo-c): New
variables.
* gnu/packages/crates-io.scm: Various new packages and upgrades.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>

* gnu/packages/bioinformatics.scm (python-scanpy): Update to 1.4.6.
[arguments]: Add another network based test to skip.
[propagated-inputs]: Add python-tqdm.

* gnu/packages/python-web.scm (python-publicsuffix2): Provide explicit
destination in calls to FORMAT.

* gnu/packages/nim.scm (nim)[arguments]: Provide explicit destination in calls
to FORMAT.

* gnu/packages/linux.scm (tpacpi-bat)[arguments]: Provide explicit destination
in calls to FORMAT.