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authorzsloan2022-10-17 13:11:05 -0500
committerGitHub2022-10-17 13:11:05 -0500
commit85b455965119768db0e6480836acaae9e7be8d5c (patch)
tree2b7b69e1b16f50aa62605e41007dfb4bd450da4f
parent8b758d38eefd93f03658d517e06e3bcb0e95d356 (diff)
downloadgn-gemtext-85b455965119768db0e6480836acaae9e7be8d5c.tar.gz
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+# Correlations fail for at least some ProbeSet datasets (as the target dataset)
+
+## How to reproduce
+
+- https://genenetwork.org/show_trait?trait_id=P40630_SWEEQMAEVGR_2&dataset=EPFL-ETHZ-BXD-LivProtCD-HF-1119
+- Use the default dataset for correlation (the same as the trait)
+- You should get the following error:
+
+GeneNetwork tux01:gene:2.11-rc2-gn_20221013-4eb4beafd
+ [Errno 2] No such file or directory: '/home/gn2/production/tmp/gn2/gn2/ProbeSetFreezeId_886_EPFL/ETHZ BXD Liver Proteome CD-HFD (Nov19)' (error)
+
+This obviously has something to do with the sample data files, though not sure what yet.