genenetwork3/tests, branch migrate-to-python3.10 GeneNetwork3 REST API for data science and machine learning http://git.genenetwork.org/genenetwork3/atom?h=migrate-to-python3.10 2023-07-10T08:36:47+00:00 Fix linting errors caused by bump to Python 3.10 2023-07-10T08:36:47+00:00 Frederick Muriuki Muriithi 2023-07-10T08:36:47+00:00 urn:sha1:c6ac30d4ccc26553a12e8c37cdf9078cbe9084b3 Skip tests broken by Python-3.10 temporarily 2023-07-05T13:06:46+00:00 Frederick Muriuki Muriithi 2023-07-05T13:06:46+00:00 urn:sha1:f52247c15f3694f3dd5fd0fd79c3e15376137e07 Skip the tests that have been broken by the migrations to Python-3.10 temporarily, until we can fix them. Update test: create throw-away variable 2023-07-05T12:50:21+00:00 Frederick Muriuki Muriithi 2023-07-05T12:50:21+00:00 urn:sha1:c065b9d3d42097310c7884bea1d3ce42ccd266a1 * Commit `b529c700` changes the return value to a tuple of values rather than a single string value. Handle that in the test. Fix linting errors and failing tests 2023-05-30T10:04:27+00:00 Frederick Muriuki Muriithi 2023-05-30T10:04:27+00:00 urn:sha1:4e572eba5fa89a0ae4c5c732babe8c4bc011d435 * scripts/register_sys_admin.py: fix linting error * tests/unit/auth/fixtures/oauth2_client_fixtures.py: hash client secret in database. The code expects it hashed in the database. Set whether resource is publicly viewable on creation 2023-05-25T03:18:25+00:00 Frederick Muriuki Muriithi 2023-05-25T03:02:38+00:00 urn:sha1:8593d882ed1eea226eeefabaa66135df2374746f auth: Roles: Check for editability 2023-04-25T06:42:36+00:00 Frederick Muriuki Muriithi 2023-04-25T06:42:36+00:00 urn:sha1:8471ed1187a8abc5e28207776c5f49a59ba24b92 Some roles should not be user-editable, and as such, we need to check before allowing any edits on such roles. This commit makes that possible. Migrations for linking genotype files. 2023-04-10T09:56:14+00:00 Frederick Muriuki Muriithi 2023-04-10T09:56:14+00:00 urn:sha1:6006526069803a8a906b4fd19f372ca721f7b29c Fix linting issues 2023-04-06T09:43:56+00:00 Frederick Muriuki Muriithi 2023-04-06T09:43:56+00:00 urn:sha1:db6457bfbcccce35162d9d2ece988c7c8c8f9308 Remove deprecated `gn3.db_utils.database_connector` function 2023-04-06T09:31:05+00:00 Frederick Muriuki Muriithi 2023-04-06T09:31:05+00:00 urn:sha1:17abad9300e4a96a14f94da486ef8307f7d27e06 Remove the deprecated function and fix a myriad of bugs that arise from removing the function. Issue: https://issues.genenetwork.org/issues/bugfix_coupling_current_app_and_db_utils Add tables to link genotype data 2023-04-04T09:13:11+00:00 Frederick Muriuki Muriithi 2023-04-04T09:13:11+00:00 urn:sha1:02e5c81e5d1281b66aa14ce47563997e845cea95