genenetwork3/tests, branch auth/implement-authorization-code-flow GeneNetwork3 REST API for data science and machine learning http://git.genenetwork.org/genenetwork3/atom?h=auth%2Fimplement-authorization-code-flow 2023-04-25T06:42:36+00:00 auth: Roles: Check for editability 2023-04-25T06:42:36+00:00 Frederick Muriuki Muriithi 2023-04-25T06:42:36+00:00 urn:sha1:8471ed1187a8abc5e28207776c5f49a59ba24b92 Some roles should not be user-editable, and as such, we need to check before allowing any edits on such roles. This commit makes that possible. Migrations for linking genotype files. 2023-04-10T09:56:14+00:00 Frederick Muriuki Muriithi 2023-04-10T09:56:14+00:00 urn:sha1:6006526069803a8a906b4fd19f372ca721f7b29c Fix linting issues 2023-04-06T09:43:56+00:00 Frederick Muriuki Muriithi 2023-04-06T09:43:56+00:00 urn:sha1:db6457bfbcccce35162d9d2ece988c7c8c8f9308 Remove deprecated `gn3.db_utils.database_connector` function 2023-04-06T09:31:05+00:00 Frederick Muriuki Muriithi 2023-04-06T09:31:05+00:00 urn:sha1:17abad9300e4a96a14f94da486ef8307f7d27e06 Remove the deprecated function and fix a myriad of bugs that arise from removing the function. Issue: https://issues.genenetwork.org/issues/bugfix_coupling_current_app_and_db_utils Add tables to link genotype data 2023-04-04T09:13:11+00:00 Frederick Muriuki Muriithi 2023-04-04T09:13:11+00:00 urn:sha1:02e5c81e5d1281b66aa14ce47563997e845cea95 tests: Set up fixture and mock out config variable 2023-03-23T15:41:38+00:00 Frederick Muriuki Muriithi 2023-03-23T15:41:38+00:00 urn:sha1:98e9726405df3cce81356534335259a446b0c458 auth: Remove the tables used for linking data to resources 2023-03-22T05:22:51+00:00 Frederick Muriuki Muriithi 2023-03-22T05:20:39+00:00 urn:sha1:926d094d4136f457f732bdba4b092226e44a1930 The way data is linked to the resources needs to be reworked. This commit removes all the existing migration scripts that created the tables formerly used for linking data in preparation for reworking the system. Fix get_all_species test 2023-03-20T01:29:50+00:00 zsloan 2023-03-20T01:25:13+00:00 urn:sha1:b3cf6ff7943356f5c227d85d19ce413dbfe230aa auth: redis data: migrate data in redis 2023-03-09T11:24:30+00:00 Frederick Muriuki Muriithi 2023-03-09T11:24:30+00:00 urn:sha1:726460a2ca4817a1b7a5c7798147996d7b7e5e2d Implement the code to migrate the data from redis to SQLite. auth: users: Use the same basic functions for password hashing 2023-03-08T08:42:04+00:00 Frederick Muriuki Muriithi 2023-03-08T08:42:04+00:00 urn:sha1:a35d16f9a191afbb31e2c185e87e5eec5e23122f To avoid repeating the same thing in multiple places, leading to errors and breakages, reuse the same basic functions for password hashing.