genenetwork3/tests/unit/db, branch migrate-to-python3.10 GeneNetwork3 REST API for data science and machine learning http://git.genenetwork.org/genenetwork3/atom?h=migrate-to-python3.10 2023-07-10T08:36:47+00:00 Fix linting errors caused by bump to Python 3.10 2023-07-10T08:36:47+00:00 Frederick Muriuki Muriithi 2023-07-10T08:36:47+00:00 urn:sha1:c6ac30d4ccc26553a12e8c37cdf9078cbe9084b3 Skip tests broken by Python-3.10 temporarily 2023-07-05T13:06:46+00:00 Frederick Muriuki Muriithi 2023-07-05T13:06:46+00:00 urn:sha1:f52247c15f3694f3dd5fd0fd79c3e15376137e07 Skip the tests that have been broken by the migrations to Python-3.10 temporarily, until we can fix them. Fix get_all_species test 2023-03-20T01:29:50+00:00 zsloan 2023-03-20T01:25:13+00:00 urn:sha1:b3cf6ff7943356f5c227d85d19ce413dbfe230aa Move sql for CRUD operations on case-attrs from gn2 to gn3 2022-05-27T12:02:25+00:00 BonfaceKilz 2022-05-25T18:36:25+00:00 urn:sha1:7bcd718a2954c2f1ff67bea84d79c7cd9a1d43a0 Move sql for modifying case-attributes from gn2 to gn3 2022-05-27T12:02:25+00:00 BonfaceKilz 2022-05-25T18:36:03+00:00 urn:sha1:9fa398d57e26c8ece01bce7a4f67545449e94821 Return all the results from CaseAttributes column as is 2022-05-27T12:02:25+00:00 BonfaceKilz 2022-05-10T14:05:28+00:00 urn:sha1:bc99eed7438e087650125ceab04797db7c726f31 * gn3/db/sample_data.py: Remove "collections" import. Add "Optional" import. (get_case_attributes): Return the results of "fetchall" from the case attributes. * tests/unit/db/test_sample_data.py (test_get_case_attributes): Update failing test. Add Endpoint to get menu items for use in UI 2022-05-26T13:42:27+00:00 Frederick Muriuki Muriithi 2022-05-26T13:42:27+00:00 urn:sha1:236d9236c794d7870258eab9e087f990c557462a Test that a carriage return is removed when generating csv 2022-04-12T10:26:57+00:00 BonfaceKilz 2022-04-12T09:07:13+00:00 urn:sha1:ca8a18f00b06a7c6ca4b022223f381ddaebbf930 * tests/unit/db/test_sample_data.py: import "get_trait_csv_sample_data". (test_get_trait_csv_sample_data): New test function. Use case attribute id inside brackets if present during insertions 2022-04-07T08:54:28+00:00 BonfaceKilz 2022-04-06T13:36:52+00:00 urn:sha1:b18de873dbead76276ee5077bc8a2afe78f61606 * gn3/db/sample_data.py (delete_sample_data): If an id is present in the column header, use it. * tests/unit/db/test_sample_data.py (test_delete_sample_data): Update tests to capture the above. Use case attribute id inside brackets if present during insertions 2022-04-07T08:54:28+00:00 BonfaceKilz 2022-04-06T13:25:23+00:00 urn:sha1:dc71058e894c9857de68c7844bfc4b813c0532da * gn3/db/sample_data.py (insert_sample_data): If an id is present in the column header, use it. * tests/unit/db/test_sample_data.py (test_insert_sample_data): Update tests to capture the above.