genenetwork3/scripts, branch main GeneNetwork3 REST API for data science and machine learning http://git.genenetwork.org/genenetwork3/atom?h=main 2025-10-28T00:11:26+00:00 Pass `TEXTDIR` configuration on to the script. 2025-10-28T00:11:26+00:00 Frederick Muriuki Muriithi 2025-10-27T19:21:01+00:00 urn:sha1:51688d31004f8f7453d8190927b9c11503a453c0 Pass the `TEXXDIR` configuration variable on to the script. Fix mypy errors. 2025-08-03T13:42:38+00:00 Munyoki Kilyungi 2025-08-03T13:36:34+00:00 urn:sha1:392d3e8c3c452be8f0fe78852ad4aee6593c9d44 Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Fix linting errors. 2025-08-03T13:42:38+00:00 Munyoki Kilyungi 2025-08-03T13:18:29+00:00 urn:sha1:7f4c5c30e3fbdce4a9d5289edd60af51fb9278f8 Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Skip blank lines. 2025-07-17T06:42:13+00:00 Munyoki Kilyungi 2025-07-17T06:42:13+00:00 urn:sha1:eb8d16fd67fc954e29ae899eddc4ec23356dbff8 Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Skip malformed genotype rows with mismatched data columns. 2025-07-17T06:42:03+00:00 Munyoki Kilyungi 2025-07-17T06:42:03+00:00 urn:sha1:aacf63b16aa5d77232d38e45b04c717203d1a5af Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Add kludge comment for "HSNIH-Palmer_true.geno" which has floats. 2025-07-16T19:50:04+00:00 Munyoki Kilyungi 2025-07-16T19:47:52+00:00 urn:sha1:dcf7fc73bc77269492ec844641f5654b16789431 Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Set a larger map size for the larger genotype files. 2025-07-16T19:50:04+00:00 Munyoki Kilyungi 2025-07-16T19:42:52+00:00 urn:sha1:4cce892e2249d52e3d3586703ece7bf4fb99127e Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Add functionality for importing one entire genotype directory. 2025-07-16T19:50:04+00:00 Munyoki Kilyungi 2025-07-16T19:37:08+00:00 urn:sha1:cef838a0905eb52982c2cda822bb202029b8861f Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> More efficiently and correctly count nrows is genotype. 2025-07-16T19:50:04+00:00 Munyoki Kilyungi 2025-07-16T19:36:42+00:00 urn:sha1:dc601eacbeeccb6348870e917fb6a486b12756d4 Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Delete un-used import. 2025-07-16T19:50:04+00:00 Munyoki Kilyungi 2025-07-16T19:31:39+00:00 urn:sha1:00d0fdd7b30f9dd7903f624466ec893656818ade Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>