genenetwork3/scripts, branch ci-cd-scripts GeneNetwork3 REST API for data science and machine learning http://git.genenetwork.org/genenetwork3/atom?h=ci-cd-scripts 2022-01-24T07:25:27+00:00 Use guix shell. Remove git commands 2022-01-24T07:25:27+00:00 Frederick Muriuki Muriithi 2022-01-21T07:31:13+00:00 urn:sha1:78d0d84fd7300e934ca76fa6faa38536b8028125 * Use guix shell rather than guix environment * Use `GN_CI_DIR` set up at invocation * Remove git commands * Use `~/.config/guix/current/bin/guix` to take advantage of declared channels Add script to run laminar pipeline 2022-01-24T07:25:27+00:00 Frederick Muriuki Muriithi 2022-01-21T04:42:10+00:00 urn:sha1:4c909d6748ef1f0e7348f7aec42a903f83c6f564 Rename job scripts to fit laminar's paradigm 2022-01-24T07:25:27+00:00 Frederick Muriuki Muriithi 2022-01-21T04:23:24+00:00 urn:sha1:2c3e163cc69fd391ecda4e3b7a27078626a3f1b4 Build script to trigger CI/CD 2022-01-24T07:25:27+00:00 Frederick Muriuki Muriithi 2022-01-19T10:14:38+00:00 urn:sha1:56eb0eb6ba121c1e65ca078e29a053d64fa12a0a minor refactoring 2022-01-22T06:23:14+00:00 Alexander Kabui 2022-01-14T00:14:36+00:00 urn:sha1:0af9e6a90fa2a65bcd2c1c6d9c6e47b9f099ec85 function override:fix target specific output file for network 2022-01-22T06:23:14+00:00 Alexander Kabui 2022-01-13T23:42:03+00:00 urn:sha1:3ab0c245d2bbfe695b5892e5a1a11c78b2cbce50 generate network 2022-01-22T06:23:14+00:00 Alexander Kabui 2022-01-13T22:16:35+00:00 urn:sha1:827811810bd37aaca7456b74efc80779f63dcc04 generate ctl plots for each trait 2022-01-22T06:23:14+00:00 Alexander Kabui 2022-01-13T16:06:58+00:00 urn:sha1:add01b2d71ba2b7a344feb719c3be9ec053a8aa5 fixes for ctl script:generate ctl ctl_significant json 2022-01-22T06:23:14+00:00 Alexander Kabui 2022-01-13T12:21:19+00:00 urn:sha1:db4cb5b9fa4e574e0c78a8443f9ddf8859b1205b bugfixes for script;create pheno and geno objects 2022-01-22T06:23:14+00:00 Alexander Kabui 2021-10-14T09:18:13+00:00 urn:sha1:b6bd968702b21f2cd8ed72be686d77a8666e2877