genenetwork2/web/genotypes, branch testing GeneNetwork (2nd generation) http://git.genenetwork.org/genenetwork2/atom?h=testing 2015-03-27T20:28:51+00:00 Removed everything from 'web' directory except genofiles and renamed the directory to 'genotype_files' 2015-03-27T20:28:51+00:00 zsloan 2015-03-27T20:28:51+00:00 urn:sha1:d0911a04958a04042da02a334ccc528dae79cc17 Fixed the borky genofile 2015-03-18T19:15:32+00:00 zsloan 2015-03-18T19:10:25+00:00 urn:sha1:f25595049150a208d7ece3956c3289f5edd230df Added r function for setting genotypes and generating the cross file 2015-03-17T22:44:41+00:00 zsloan 2015-03-17T22:44:41+00:00 urn:sha1:5eb5ccc135a24216481905226382ece03ae228b7 Added Karl's correlation matrix code 2014-06-25T20:19:02+00:00 Zachary Sloan 2014-06-25T20:19:02+00:00 urn:sha1:df6a70c9a06bc30856a1bc46023bd67e5325f5c9 Improved the "scatterplot matrix" feature on the trait page so that it matches the chosen trait against every selected trait Committing a bunch of changes related to integrating GEMMA and 2014-05-05T17:09:24+00:00 Zachary Sloan 2014-05-05T17:09:24+00:00 urn:sha1:759a7a23b0ea848b8c8ffe2804841322254d8696 adding the correlation matrix page Made some changes related to getting marker regression working for 2013-08-14T22:39:28+00:00 Zachary Sloan 2013-08-14T22:39:28+00:00 urn:sha1:11c426d50ac6718e16981be603527bd569f9d11a some datasets Created file gen_group_samplelists that iterates through all genofiles 2013-07-19T21:13:47+00:00 Zachary Sloan 2013-07-19T21:13:47+00:00 urn:sha1:6aaefdaae3a9fb068278d9b94d8cdf25d4f8d852 and builds each groups' samplelist Added Amelie's rat data genotypes 2013-07-18T22:39:10+00:00 Zachary Sloan 2013-07-18T22:39:10+00:00 urn:sha1:0fcadee805a6d4a2007e57a69ab130eb9b1c1a3c Got human mapping mostly working Fixed dataset dropdown menus Got code that creates DataSets object running 2013-06-26T21:35:07+00:00 Zachary Sloan 2013-06-26T21:35:07+00:00 urn:sha1:6fbbfe5e8bcc3b57c4177687bbf67bf041da3cba Fixed one genofile that had extra quotation marks in the comments that caused an error Defaults mb_graph_interval to 1 for species without chromosome lengths in megabases Adding genotypes and new_genotypes (json files) directories to git 2013-02-21T22:26:22+00:00 Zachary Sloan 2013-02-21T22:26:22+00:00 urn:sha1:d391c4ca17a32c672b6aa65bb586d73eee4b48fc so they can be pulled to the new EC2 server