genenetwork2/scripts, branch refactor-data_set_py-20220920 GeneNetwork (2nd generation) http://git.genenetwork.org/genenetwork2/atom?h=refactor-data_set_py-20220920 2022-06-03T19:32:14+00:00 Give speciesid single quotes like the other config_dic keys, just for consistency 2022-06-03T19:32:14+00:00 zsloan 2022-06-03T19:32:14+00:00 urn:sha1:13450230b635194ffb6682e41d77cbaef2ca4b8b Allow GenoFreezeId to be passed in configurations to load_genotypes.py 2022-06-03T19:31:42+00:00 zsloan 2022-06-03T19:31:42+00:00 urn:sha1:f8ea5626edffbe358215f8c31bc257c9c8b7be34 Add updated version of script for adding new expression sample data 2022-03-11T22:40:37+00:00 zsloan 2022-03-11T22:33:37+00:00 urn:sha1:578684c741c1b90576f775075d858c224869c699 Use context manager with database connection 2022-03-10T05:55:26+00:00 Frederick Muriuki Muriithi 2022-03-10T05:55:26+00:00 urn:sha1:4a7e2c1602ed82aabd7d04953067ba49cb1cebff Use the `with` context manager with database connections and cursors to ensure that they are closed once they are no longer needed. Where it was not feasible to use the `with` context manager without a huge refactor/rewrite, the cursors and connections are closed manually. Some updates to the DOL genotypes conversion script 2021-12-17T20:11:37+00:00 zsloan 2021-12-17T20:10:33+00:00 urn:sha1:69676ecd49a779350ef7bd3faa348c7f27602a20 Add created_timestamp when creating a new group 2021-11-05T14:40:52+00:00 BonfaceKilz 2021-11-05T14:40:52+00:00 urn:sha1:990d2e4305ed89c2bc78ff370b71a3a4f68e5f01 Add created_timestamp when creating a new group 2021-11-05T14:35:13+00:00 BonfaceKilz 2021-11-05T14:35:13+00:00 urn:sha1:178fe53c907b8857865236d9066d7f6f3cf3d9a7 Use members uuid 2021-11-05T10:44:01+00:00 BonfaceKilz 2021-11-05T10:44:01+00:00 urn:sha1:5c8429d6365e0a03ea2686633df5fd555c9b8ae5 Add script for manually adding "editors" to each resource 2021-11-05T10:40:44+00:00 BonfaceKilz 2021-11-05T10:40:44+00:00 urn:sha1:f75ffe73e592bc79f4decf268d50b225ade43488 scripts: resource: Add value for "admin" when updating resources 2021-10-25T11:00:14+00:00 BonfaceKilz 2021-10-19T13:47:38+00:00 urn:sha1:182327254fe2964c3dd41aabe49ab99748800a64