genenetwork2/gn2/wqflask/static/new/javascript, branch testing GeneNetwork (2nd generation) http://git.genenetwork.org/genenetwork2/atom?h=testing 2024-10-22T16:30:17+00:00 Add GN2 Fallback link to index page and and error page/text 2024-10-22T16:30:17+00:00 zsloan 2024-10-22T16:30:17+00:00 urn:sha1:05eab16f9e034d99bf74a224eb55b5856a4e7e15 Also removed the error callback from the menu AJAX call since it seems to just duplicate the error message (which is also handled by the statusCode function) Show the Location for the Description when selecting a cofactor that is a genotype marker 2024-09-18T18:53:30+00:00 zsloan 2024-09-18T18:51:56+00:00 urn:sha1:d72aa3b0ef39cef58a38a588cb2d07762a7ca424 Make all code related to Spearman Rank scatterplot conditional on not being an Effect Size plot 2024-09-18T18:53:30+00:00 zsloan 2024-09-18T18:44:11+00:00 urn:sha1:58b4cd559ea5c5dc8381af923573065b488e536c Increase scatterplot tick length 2024-09-18T18:53:30+00:00 zsloan 2024-09-18T18:36:52+00:00 urn:sha1:1afae10b6fe838297e465dcc4e94df5eb43490ea Don't set number/format of ticks for Y-Axis 2024-09-17T14:38:13+00:00 zsloan 2024-09-17T14:37:02+00:00 urn:sha1:ee40a7ee9ccc5652a772b46ce1756882d29d4166 Now that there's a flag for whether a plot is an Effect Size plot, there's no need for this Handle Effect Size plots on the scatterplot page 2024-09-17T14:38:13+00:00 zsloan 2024-09-16T18:49:34+00:00 urn:sha1:805b781e6eabfb42cbecb319fffc8ade855de914 Added a new parameter to the scatterplot page ('effect') that causes the figures to be drawn differently. For example: - The plot width is different - Spearman Rank plot isn't displayed/generated - The number of X-axis ticks is explicitly set to 3, with no decimal places Refactor: remove hardcoded links and fix bug for path. 2024-09-17T12:13:57+00:00 Alexander_Kabui 2024-09-17T12:13:57+00:00 urn:sha1:5c71ead0411b834b51bf084c147543208390c310 Remove JS d3panels package - we are moving that to guix-bioinformatics 2024-09-11T18:03:16+00:00 Pjotr Prins 2024-04-04T09:29:59+00:00 urn:sha1:1de22f93c29ae792b1c9280c84d57cc39b5b11e4 Add link to GeneCup to tool buttons 2024-07-03T20:55:37+00:00 zsloan 2024-07-03T20:55:37+00:00 urn:sha1:92e0c8b492e96f5875bc2bb1df3e043abde2f280 This also includes a function for converting a list of traits/datasets to symbols, which was added to trait.py Automatically decide whether to use Xapian or SQL (uses Xapian if possible) + remove separate search button 2024-06-27T19:34:42+00:00 zsloan 2024-06-26T22:24:53+00:00 urn:sha1:bb50f7dfcc753e1067c4e146f9b8973872fb2d63 Change logic so that SQL is used for non-term Publish searches, since searches for phenotype trait IDs currently don't work in Xapian